ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7546913 | ES cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◢ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◣ SRX7546913: ES cells

◢ SRX7546914: ES cells

◢ SRX823607: ES cells

◢ SRX12142046: mESCs, differentiated

◢ SRX12142051: mESCs, differentiated

◢ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◢ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Alg14
Znrf1
Letmd1
Slc25a4
Cldn34d
Ncdn
AU040320
Slc15a1
Pabpc1
Vezt
Fgd6
Mup4
Wrap53
Trp53
Acp5
Tmem181a
Gatad2a
Setd5
Slc6a16
Cd37
Prdm4
Gja1
Atrn
Wsb2
Man2a2
Gid4
Lama1
Rragc
Cd38
Asxl1
Kif17
Rheb
Eno1
Colec12
Nphp3
D630039A03Rik
Wdr59
Zcrb1
Pphln1
Spata24
Atxn3
Zfp964
Mbd3
Ywhae
Trim72
Arfgef1
Coro2a
Gm4861
Defb46
Exoc6b
Rif1
H3f3a
D5Ertd579e
Chd1
Tmed7
Eif1a
Ccdc30
Klf5
Lypla1
Setd1b
Apbb2
Abl1
Terf2
Arl2
Timp4
Prkag1
Mllt1
Hoxa2
Rnf114
Mllt6
Smc6
Gen1
Lrrc8b
Pacsin2
Tbc1d5
Snx15
Ufsp1
Tmem62
Tulp4
Sfxn2
Arl3
Tagln3
Myo10
Rnf125
Dynll2
Atg5
Fcgr3
Rmnd5b
Mios
Rpp14
Htd2
Slc12a4
Adgra2
Rybp
Rassf8
B3gnt7
Apc
Hoxb13
Pum3
Dnttip2
Cep63
Anapc13
Flywch1
Pvr
Slc37a3
Rab19
Prnp
Prn
Notch2
Donson
Togaram1
Klhl28
Qpct
Slc9a3r1
Spag4
Znfx1
Abcc4
Mycn
Slc26a8
Mapk14
Ptch2
Slc7a7
Mreg
Mrps15
Mea1
Klhdc3
Spef1
Cenpb
Zfp410
Pcgf6
Cluh
Polg2
B3gnt4
Agtrap
Gne
Parp12
Dhx32
Ankle2
Pef1
Zdhhc6
Vti1a
Umad1
Rpa3
Isl1
Ptprz1
App
Hnrnpdl
Enoph1
Usp5
Cdca3
Pcgf1
Tfeb
Radil
Ccn2
Ubr5
R3hdm2
Nefh
Ap1b1
Hic1
Ptms
Tmco4
Stmn1
Ptpra
Cep70
Ddx20
Grb2
Dcaf11
Enpp4
Mrpl23
Prkar1a
Chrac1
Nadsyn1
Dhcr7
Cds1
Pdcd2
Ifitm7
Bmerb1
Cpsf4l
Sptb
Cerkl
Vrk1
Tprn
Rps10
Ints9
Hmbox1
Ddah2
G2e3
Ift140
Cramp1l
Fahd2a
H2az2
Ralb
Cmas
Zscan10
Zfp13
Abl2
Rbm47
Ptger1
Fbxo5
Ndrg1
Tmem131l
Pdpk1
Nodal
Cd300lg
Ppp1ccb
Ppp1cc
Dpf3
Ms4a10
Smad6
Cfl1
Slc35f2
Soga3
Lrrn2
Pcif1
Aldh5a1
H1f2
Ppp2r3a
Usp37
Cnot9
Gdap1
Chid1
Znhit2
Mrpl49
Fau
Adnp2
A630095N17Rik
Cecr2
Col26a1
Rnf122
Cuedc1
P3h1
AU022252
Mt1
Med12l
Fam136a
Dgkd
Cbll1
Castor1
Zfand6
Slc17a5
Tbc1d9
Hspb1
AI413582
Phf12
Picalm
Coq2
Faim
Rab4a
Slc4a2
Cdk5
Dnmt3a
Tdrd3
Etv6
Mterf1a
Ccdc9
Snn
Tvp23a
Ppp2ca
Mkrn2
Lax1
Irgm1
Plcxd1
Yod1
Pfkfb2
Zfp9
Sclt1
D3Ertd751e
Mael
Trappc5
Fcor
Arhgap32
Hdac1
Ust
Grid2ip
Tmeff1
Baz1b
Gsx1
Pygo2
Phyhipl
Tmtc4
Prelid3a
Cdkl2
Lifr
Wbp11
BC049715
Pdlim5
Mapk4
Timm44
Aoc3
Hipk2
Trabd
Atp2c2
Pnkd
Aamp
Parp6
Serpini1
Pdcd10
Pitpnm1
Cdk2ap2
Slc31a1
Fkbp15
Cdkn2aip
Ttc28
Foxd2
Gpbp1
Zhx1
Fbrsl1
Asap2
Lama5
Zbtb25
Zbtb1
Mterf1b
Ido1
Slco5a1
Foxf1
Cul5
Cd47
Zdhhc2
Zbtb8a
Max
Glra3
Klhdc8b
Ccdc71
Kcnj4
Cds2
Pdp2
Dhrs7b
Shoc2
Bbip1
Lsmem2
Steap3
Jade2
Fam161a
Bcl6
Cox8b
Tmem235
Axin1
Klf1
Fignl2
Racgap1
Mnx1
Slc12a2
Fbxo34
Casc3
Ghitm
Hsdl1
Dnaaf1
Mturn
Rabggta
Ndrg4
Sh3rf1
D030056L22Rik
Cdc45
Nr2f6
Ptpn14
Arap2
Rtcb
Flrt2
Sbk1
Plekha7
Sbk2
Rnf220
Scaf11
Kctd6
Caprin1
Msc
Akt2
Slc5a1
Coil
Poc1b
Galnt4
Atp1a1
Spred1
Reep5
Mrps35
Unc5b
Tcea3
Rap2a
Smyd4
Rpa1
Fubp3
Wnt3a
Mib2
Exd2
Fam118a
Gprc5a
Slc16a9
Pxdc1
Cltb
Marchf7
Mab21l1
Smad4
Uhrf2
Coa4
Cdhr1
Sp2
Bcl10
Syne2
Pik3r3
Pdrg1
Ywhag
Slc25a22
Gja4
Zfp868
Jund
Iqcn
Vstm2l
Elovl2
Il17rd
Cdc16
Arid3c
B3gnt2
Dis3l
Tpcn2
Garre1
C1ql1
Asap1
Apoe
Chn1
Ror1
Pdia3
Catsper2
Hey1
Tsga10
Rest
Gjc1
Ssh1
Timm9
2700049A03Rik
Txndc12
Btf3l4
Zfp978
Zfp991
Smad7
Smarce1
Plk3
Ginm1
Frg2f1
Foxj3
Fam227b
Dtwd1
Nfyb
Pigk
Pmaip1
Slc22a17
Mapkapk5
Ntng1
Xpo6
E030030I06Rik
Recql4
Lrrc14
Iqch
Aagab
Unkl
BC003965
Ahdc1
Epp13
Vdac3
Ptdss1
Mterf3
Cep192
Dus2
Ddx28
Galnt16
Nkiras2
Dnajc7
Pitx3
Gbf1
Ccdc60
Ephb3
Tmem42
Nfix
Epha4
Prrc2b
Nkx2-5
Dmap1
Rnf103
Dyrk4
Dvl1
Hcfc2
Fam53b
Sema4b
Usp36
Slc25a1
Rexo1
Rev3l
Zfp36
Zfp36l2
Pcbp2
Akip1
Hmgxb4
Zkscan17
Mxra8
Klhl2
Zfp976
Tbl1xr1
Csn1s2a
Dab1
Clasp2
Fignl1
Poll
Dpcd
Zfp217
Hpgd
Mpzl1
Cnot11
BC031181
Ubc
Cldn14
Tmem200c
Limk1
Tiparp
Tufm
Tmc8
Tmc6
Itm2b
Arhgap42
Brinp1
Lpgat1
Ninj1
Ccdc134
Slc13a2
Cacng2
Oplah
Ube2d1
Tpd52
Slc27a2
Crocc
Actr10
Cst3
Lgmn
Trmt1l
Swt1
Atad3a
Zfp982
Nup85
Tbx20
Gzme
Msra
Arhgap19
Arf2
Trim7
Klf11
B4galt2
Atp6v0b
Setdb2
Gm45935
Cab39l
Fads1
Ncoa1
Pycr1
Myadml2
Ap2m1
Prom1
Slc7a6os
Prmt7
Shroom3
Itpkc
Coq8b
Gli2
Chmp4c
Zbtb45
Ubfd1
Ears2
Hook2
T2
Tent5c
Orai1
Setx
Hif3a
Enpp3
Hcn4
Ap1g2
2510009E07Rik
Sfn
Spx
Vim
Wipi2
Rabggtb
Msh6
Smarcd3
Csde1
Wiz
Mdm4
Mtfr1l
2210016F16Rik
Psd
Fbxl15
Mtarc1
Socs2
Pnrc1
Tle2
Spast
Fam178b
Fam102a
Pde3a
Cic
Gna13
Lrrn4
Fndc3b
Utp15
Ankra2
Cand1
Zbtb34
Ccpg1os
Ccpg1
2700081O15Rik
Tmem170b
Snx17
Eif2b4
Srd5a3
Zfp532
Col5a1
Cdk13
Zfp64
Slc14a1
Naa16
Stk38
Klhl13
Wnt16
Sms
Ptges2
Set
Kcnma1
Suclg2
Rad51ap1
D6Wsu163e
Ppp2r5b
Rtn4rl1
Dph1
Gpcpd1
Abcc1
En2
Macroh2a2
Tmem199
Poldip2
Plxna1
Igfbpl1
Asah2
Iqgap2
Tcl1
Zfp663
Mnt
Trmt61a
Midn
Gm36210
Hnrnpa2b1
Cbx3
Hinfp
Camk2n1
Lpar2
Flnc
Zscan18
Mfsd13a
Tubgcp6
Adamts7
Nfatc3
Tab1
Abca8b
Dok5
Pdha1
Unk
Mettl9
Sh3gl3
Kcnt1
Gdap1l1
Sntg1
Afg1l
Egln1
Tada3
Arpc4
Meaf6
Ppfia1
Pou3f3
Ctr9
Cd55
Aktip
Suz12
Ttc9b
Hes3
H3c15
H3c14
H2ac19
H2ac18
Ppp2cb
Golm2
Enah
Nanos3
Trim8
Pgrmc2
Zfp36l1
Mfap3l
Rpp38
Acbd7
Pkm
Ckb
Pus3
Ddx25
Slc39a4
Tsc22d4
Nyap1
Cct2
Ube2v2
Pex5
Usp13
Olfr1034
Mafg
Chd7
Bcap31
Abcd1
Tex45
Pex11g
Ccdc136
Mib1
Map2k5
Fnta
Itga9
Notum
Adam12
Sp5
Stx11
Tigar
Col27a1
Rpp40
Gpsm2
Ppia
Olfr212
Tigd5
Eef1d
Fkbp14
Wscd2
Rps19
Nrros
Klc3
Cdr2l
Spata7
Fosl1
Cfap300
Plcb4
Srpr
Foxred1
Brms1l
Trmt9b
Rax
Denr
Cort
Per3
Hectd1
Ctif
Psmd3
Mbp
Tmem121
Dll4
Uhrf1bp1
Mier2
Tanc1
Ptch1
Cspp1
Cops5
Phlpp2
Vgll3
Cers5
Foxp1
Smim1
Ssr1
Plekha5
Onecut2
Meox1
Bloc1s5
Ooep
Tasor
Tor4a
Dsn1
Clk1
Herpud2
Sdhaf4
Pawr
Tcim
Rnf8
Maz
Utp23
Prrt2
Rasa2
Ube3c
Ggnbp2
Ccser1
Edf1
Zfp62
Ppara
Ppfibp1
Myo5c
Jak2
Car2
Trim62
Smarca1
Tmem104
Nat9
Krtap10-10
Tinagl1
Mei4
Mkx
Prickle1
Phf20
Rrbp1
Mon2
Tpst2
Dennd2c
Exosc6
Slc39a3
H3c13
H2bc18
Cbs
Dlat
Glra1
Mamstr
Pld6
Gmeb2
Cux2
Esrrb
Ltn1
Rwdd2b
Ryr2
Bod1l
Trim36
Hps3
Zfp839
Nampt
Tlcd2
Kcp
Cep112
Marcks
Pard3
Rab18
Rsbn1
Kcnq3
Cand2
Pdpr
Nostrin
Pxk
Steap4
Acta1
Camk1d
Slc17a9
Txlng
Anp32a
Gm20346
Pdxdc1
Mpv17l
Nectin2
2700062C07Rik
Tmem198
Chpf
Ska3
Mrpl57
Efnb3
Bcar1
Dpp6
Phc2
Sumo3
Ccnd1
Crh
Garnl3
Trh
Lag3
Arid4b
Zfhx3
Tra2a
Got1
Atg14
Pou2f1
Tsc22d3
Ube2c
Kazn
Prmt8
Skor2
Leprotl1
Immp2l
Gtf3c4
Hmx3
Npepps
Scoc
Mat2a
Snai1
Plin3
Ndufa6
Kmt2c
Zxdc
Ubtf
Gabrb3
Vps37d
Spry4
N4bp1
Lrrc8d
Cox5a
Ccdc194
Accs
Foxp2
Dnajc6
Zfp512b
Slc25a44
Zfp598
Prmt9
Plekhg5
Slc66a2
Fgfrl1
Prune1
Mindy1
Vps8
Yrdc
1110065P20Rik
Csnk1g2
Tmem256
Nlgn2
Rnf216
Mfsd13b
Cdr2
Fmnl2
Dnaaf3
Mthfd2l
Bcl7b
Bdkrb2
Tafa3
Ppm1j
Sugt1
Rhbdf1
Mpg
Cit
Csnk2a2
Fbxl7
Dmtn
Timp2
Prkag2
Krit1
Ankib1
Dusp4
Lrrc25
Zfp24
Ckap2
Ovol2
Gclm
H2ax
Pald1
Zfp687
Pdp1
B230219D22Rik
Slc30a9
Csrp2
Polr2j
Mcf2l
Mbtps2
Csnk2a1
Mef2d
Adgrl1
Abhd6
4930453N24Rik
Ppfibp2
Negr1
Dclk1
Trim25
Fbp1
Dip2b
Camta2
Pmp22
Tyw3
Cryz
Capg
Napepld
Ccnd3
Myoz3
Tmsb10
Tmem106b
Zyg11a
Dnajc10
Tdh
Rnps1
Letm1
Nnt
Nolc1
Tcte2
Cd63
Ubtd1
Mms19
Hemk1
6430571L13Rik
Gpn3
Fam216a
Nr2f2
Cnn3
Cops3
Dnajc5
Tgfbrap1
AI597479
Rbm38
Cdh24
Sp9
Glul
Kdm2b
Ttc21b
Snap29
Pi4ka