ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7546914 | ES cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◢ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◢ SRX7546913: ES cells

◣ SRX7546914: ES cells

◢ SRX823607: ES cells

◢ SRX12142046: mESCs, differentiated

◢ SRX12142051: mESCs, differentiated

◢ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◢ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Alg14
Znrf1
Slc25a4
Pabpc1
Wrap53
Trp53
Letmd1
Mup4
Slc15a1
Wsb2
Cldn34d
Gatad2a
Setd5
Prdm4
Vezt
Fgd6
Ncdn
AU040320
Acp5
Gja1
Zcrb1
Pphln1
Slc6a16
Cd37
Asxl1
Eno1
Tmem181a
Zfp410
Rheb
Trim72
Cd38
Atrn
Kif17
Spata24
Lama1
Prkag1
Gid4
Apbb2
Man2a2
Colec12
Coro2a
Nphp3
Pacsin2
Rnf114
Dhx32
Rassf8
Wdr59
Terf2
Setd1b
D630039A03Rik
Sfxn2
Arl3
Mbd3
H3f3a
Exoc6b
Timp4
Zfp964
Smc6
Gen1
Rragc
Atxn3
Ywhae
Mios
Defb46
Tagln3
Hnrnpdl
Enoph1
Ddah2
Tmed7
Eif1a
Ubr5
Arfgef1
Tulp4
Lifr
Ufsp1
Donson
Pum3
Rif1
Dynll2
Abl1
B3gnt7
Fahd2a
Lypla1
Abcc4
Radil
Gm4861
Stmn1
Slc7a7
Prelid3a
Hoxb13
Prnp
Prn
Bcl10
Tmem62
Dnttip2
Myo10
Klf5
Rnf125
Slc37a3
Rab19
Ptprz1
Lrrc8b
D5Ertd579e
Rybp
Hoxa2
Ift140
Cramp1l
Notch2
Flywch1
Polg2
Ccdc30
Ddx20
G2e3
Togaram1
Klhl28
Mllt1
Slc9a3r1
Arl2
Qpct
Tmem131l
Adnp2
Ndrg1
Atg5
Dhrs7b
B3gnt4
Adgra2
Pef1
Zscan10
Zfp13
Chd1
Slc26a8
Mapk14
Med12l
Prkar1a
Rpp14
Htd2
Mrps15
Mycn
Parp6
H1f2
Tdrd3
Hic1
Apc
Tprn
Slc25a22
Lax1
Sptb
Spef1
Cenpb
Pvr
Sbk1
Col26a1
Zfand6
Ptch2
Gne
Parp12
Shoc2
Bbip1
Ptpra
D030056L22Rik
Coq2
Tfeb
Vrk1
Tbc1d9
Rab4a
Snx15
Tbc1d5
Pcgf1
Gsx1
Dnmt3a
Ppp2r3a
Trappc5
Fcor
Mab21l1
Sbk2
Cdkn2aip
Usp37
Cnot9
App
Soga3
Mllt6
Snn
Agtrap
Ptger1
Slc31a1
Fkbp15
R3hdm2
Cmas
Mreg
Smad6
Rnf122
Dcaf11
Cd300lg
Zfp9
Sh3rf1
Pdp2
Nodal
Ppp2ca
Pcif1
Unc5b
Chrac1
Zdhhc2
Fbrsl1
Enpp4
Zfp532
Zdhhc6
Vti1a
Rest
Ccdc9
Serpini1
Pdcd10
Rps10
Sclt1
D3Ertd751e
Kcnj4
Fbxo5
Nefh
Ap1b1
Cds1
Hsdl1
Dnaaf1
Prrc2b
Mrpl23
Ralb
Hmgxb4
Glra1
Tmco4
Ccn2
Grb2
Mea1
Klhdc3
Cep70
Cbll1
Dgkd
Ubc
Fam136a
Znfx1
Zbtb45
Pdcd2
Wbp11
BC049715
Trmt61a
Asap2
Lpgat1
AI413582
Tmem170b
Coa4
Cdc16
Golm2
Spag4
Isl1
Abl2
Pcgf6
Mterf1a
Zhx1
Gdap1
Scaf11
Fam227b
Dtwd1
Usp5
Cdca3
Epha4
Ifitm7
Bmerb1
Slc12a4
Mib2
Tmeff1
Zfp36
Gzme
Dyrk4
Ido1
H2az2
Aldh5a1
Snx17
Eif2b4
Cldn14
Racgap1
Il17rd
Ints9
Hmbox1
Cecr2
Lsmem2
Fubp3
Slc16a9
Umad1
Rpa3
Pxdc1
Rabggta
Ap1g2
Klhdc8b
Ccdc71
Max
Mtfr1l
Chid1
Actr10
Jade2
Ror1
Phyhipl
Zfp978
Zfp991
Plcxd1
A630095N17Rik
Znhit2
Mrpl49
Fau
Faim
Rtcb
Lgmn
Exd2
Mt1
Ndrg4
Pitpnm1
Cdk2ap2
Slc17a5
Timm44
Phf12
Ptms
Tsga10
Smyd4
Rpa1
2210016F16Rik
Zfp868
Spast
Itm2b
Flrt2
Cep192
Smad7
Plekha7
Mturn
Cox8b
Nadsyn1
Dhcr7
Pdlim5
Arhgap32
Slc25a1
Arid3c
Zbtb8a
Rap2a
Marchf7
Coil
Pmaip1
Hcfc2
Slc35f2
Arhgap19
Dpf3
Mapkapk5
Cdkl2
Chn1
Csn1s2a
Picalm
Fbxo34
Atp2c2
Steap3
Etv6
P3h1
AU022252
Ms4a10
Pygo2
Tcea3
Gmeb2
Slco5a1
Castor1
4930474N05Rik
Hspb1
Ccdc60
Vdac3
Poll
Dpcd
Slc4a2
Cdk5
Socs2
Cep63
Anapc13
Tvp23a
Ryr2
Smad4
Olfr1034
Cerkl
C1ql1
Hipk2
Pitx3
Gbf1
Mterf1b
Klhl13
Ankle2
Fignl2
Pdha1
Fam118a
Tmem235
Pnrc1
Pus3
Ddx25
Cdc45
Tent5c
Cit
Hes3
Fbxl7
Cspp1
Cops5
Mettl9
Rbm47
Caprin1
Trabd
Hnrnpa2b1
Cbx3
Clasp2
Mamstr
Ppp1ccb
Ppp1cc
Pik3r3
Mafg
Wiz
Midn
Nfix
Tmtc4
Fam161a
Rnf103
Slc12a2
T2
Ttc9b
Pdia3
Catsper2
Ttc21b
Tpst2
Cep112
Gjc1
Sp2
Nr2f6
Mnx1
Kctd6
Oplah
Ube2d1
Akt2
Hdac1
Tdp2
Acot13
Glra3
Lrrn2
E030030I06Rik
Zfp982
Rpp38
Acbd7
Cul5
Ust
Pdrg1
Cds2
Foxd2
Recql4
Lrrc14
Rpp40
Arf2
Gli2
Arhgap42
B3gnt2
Msh6
Zbtb25
Zbtb1
B4galt2
Atp6v0b
Slc22a17
Kcnt1
Nkiras2
Dnajc7
Fads1
Lrrc8e
Mkrn2
Lama5
Irgm1
Ttc28
Slc22a23
Zbtb34
Yod1
Pfkfb2
Hgh1
Gna13
Psd
Fbxl15
Ltc4s
Trh
Slc13a2
Pex5
Rmnd5b
Pgrmc2
Klhl2
Abcc1
Cacng2
Fndc3b
Txndc12
Btf3l4
Dab1
Unk
Pxk
H3c15
H3c14
H2ac19
H2ac18
Cfl1
Csnk2a2
Ptch1
Lrrn4
Cluh
Rcc2
Vstm2l
Ap2m1
Ntng1
Slc5a1
Nup85
Kcnq3
Hey1
Atad3a
Ephb3
Setdb2
Gm45935
Cab39l
Ckb
Klf1
Tbl1xr1
Ctif
Tmem42
Actl6b
Cpsf4l
Ppfia1
Denr
Enah
Stk38
Timm9
2700049A03Rik
Nfyb
Mapk4
Lrrc8d
Rad51ap1
D6Wsu163e
Trim7
Garre1
Mxra8
Pnkd
Ubfd1
Ears2
Aamp
Smarce1
Mrps35
Axin1
Nanos3
Tcte2
Slc25a44
Tubgcp6
Ppfibp1
Brinp1
Jund
Iqcn
Dus2
Ddx28
Ppp2r5b
Setx
Plekha5
Ubtf
Cdk13
Orai1
Ssh1
Unkl
BC003965
Ahdc1
Cnot11
Hif3a
Msc
Suclg2
Tmem63b
Mrpl14
Fam178b
Ube2c
Phf11d
Cuedc1
Mbtps2
Xpo6
Trmt1l
Swt1
Cd55
Rasa2
Poc1b
Galnt4
Hcn4
Dolk
Ginm1
Cort
Mael
Zfp64
Pdpk1
Marcks
Bloc1s5
Prickle1
Snai1
Col27a1
Bcl6
Tbx20
Camk2n1
Onecut2
Tab1
Ywhag
Tpd52
Bcap31
Abcd1
Rps19
Nfatc1
Naa16
Ssc5d
Nat14
Wipi2
Fam102a
Ddx3x
Gprc5a
Timp2
Ltn1
Rwdd2b
Asah2
Ccnd1
Gpbp1
Mylk2
Rsbn1
Atg14
Zfp62
Sf3a1
Ccdc157
Ghitm
Pigk
Prmt9
Hpgd
Srd5a3
Iars2
Bpnt1
Reep5
Wnt3a
Ints14
Mkx
Trim8
Dsn1
Bod1l
Dok5
Zfp839
Dvl1
Slc14a1
Spred1
H3c13
H2bc18
Cd47
Gpcpd1
Rnf220
Pdpr
Nkx2-5
Acbd5
Ncoa1
Per3
Aoc3
Hectd1
Dis3l
Exosc6
Olfr212
Napepld
C1ql3
Zfp217
Wdr61
Atp1a1
Dnah2
Smim1
Rab37
Mpzl1
Mnt
Ninj1
Gcnt4
Erbin
4930402H24Rik
Immp2l
Sumo3
Utp15
Ankra2
Cdr2l
Hacd3
Dnajc6
Rhbdf1
Mpg
Spx
Klf11
Map2k1
Garnl3
Sap18b
Sap18
Cdhr1
Rtn4rl1
Dph1
Mettl14
Csde1
Ccpg1os
Ccpg1
Ptges2
Stx11
Fnta
Macroh2a2
Txlng
Pyurf
Igfbp2
Gpr108
Trip10
Fam53b
Mfap3l
Set
Tmem104
Nat9
Nfatc3
Sh3gl3
Gdap1l1
Tmc8
Tmc6
Ripor2
Smarca1
Mapk8
Wscd2
Rrbp1
Kin
Atp5c1
Yars2
Nrros
Capg
Pkm
Zfp35
Grid2ip
Meaf6
Uhrf1bp1
Ube3c
Mier2
Zfp976
Trim62
Rev3l
Arap2
Igfbpl1
Cltb
Mfsd13b
Cdr2
Shroom3
Phc2
Plk3
Chrm4
Arid4b
Gclm
Glul
Rabggtb
Afg1l
Catip
Tgfbr3l
Snapc2
En2
Trim36
Glipr1l3
Caps2
Crocc
Fkbp14
Sun1
Skor2
Casc3
Plaat3
Crh
Fignl1
Tcim
Trim68
Baz1b
Sfn
Klhl23
Epp13
Lag3
Dll4
Ccdc136
Chmp4c
Tigar
Trmt9b
BC031181
Tmem44
Slc39a4
Syne2
Tiparp
Nt5c3
Tmem106b
Polr1d
Lnx2
Plcb4
Gls
Loxl3
Dok1
Tsc22d3
Tdh
Tex45
Pex11g
Tspan17
Osgin2
Hinfp
2510009E07Rik
Zkscan17
Map2k5
Cst3
Lcor
Mbp
Tafa3
Ppm1j
Gtf3c4
Galnt16
Phax
Aldh7a1
Sntg1
Slc39a3
Sema4b
Ska3
Mrpl57
Tpcn2
Fgf5
2700081O15Rik
Hook2
Asap1
Chd8
Pde3a
Lrrc25
Agpat5
Washc4
Ipo8
2700062C07Rik
Tmem200c
Ccdc134
Proser2
Ptdss1
Mterf3
Ppat
Paics
Pou3f3
Gmcl1
Edf1
Rmi1
Hnrnpk
Zbtb24
Rexo1
Lrrc8c
Sp5
Rnf8
Prmt8
Tbx1
Cbs
Sin3b
Mtarc1
Dusp4
Fosl1
Cfap300
Smarcd3
Hmgb3
Kcnma1
Tor4a
Nadk2
Muc3
Ripply1
Axl
Tgfbrap1
AI597479
Cnnm4
Arhgef16
Myo5c
Slco4c1
Txnrd2
Comt
Adgrl1
Limk1
Cdh1
Zfp36l1
Tsc22d4
Nyap1
Tubb5
Mdc1
St3gal3
Inafm2
Tmem256
Nlgn2
Adamts7
Plekhg5
Pdp1
Lpar2
Amd2
Amd1
Pycr1
Myadml2
Xbp1
Prrt4
Kcp
Plekhg2
Mthfd2l
Krt17
Efnb3
Frmd6
Cachd1
Dctn4
Rnf11
Yy1
Tmem121
Ptpn14
Slc46a3
Kmt5c
Abcb4
Epha10
Uhrf2
Pcbp2
Mylip
Zfp598
Ssr1
Tra2a
Usp13
Nid2
Erc1
Zfpm1
Cbfa2t3
Prkab1
Ppia
Gapvd1
Ctr9
Zfp937
Iqch
Aagab
Spink2
Zfp36l2
Cux2
Gnaq
Zscan5b
Polg
Ly6g5b
Gpank1
D17H6S53E
Csnk2b
Pcm1
Gja4
Chd7
N4bp1
Kazn
Gabbr1
Tinagl1
Fgfrl1
Epb41l4a
Flnc
Kl
Kcnh2
Gdpgp1
Cib1
Phlpp2
Letm1
Tmem123
Ptpre
Phf20
Slc66a2
Plin3
Brwd1
Gm36210
Irf1
Rnase4
Ang
Ppp2cb
Ltb4r2
Ltb4r1
Cideb
Nectin2
Uqcrq
Gdf9
Wipf1
Csad
Zfp740
Stc2
Ctdsp1
Tspan2
Kcng3
Ndufa6
Bcat2
Nnt
Celf5
Tle4
Prom1
Acta1
Slc27a2
Kif5a
Dctn2
Usp36
Ppfibp2
Zyg11a
Stx8
Cfap52
Fam107b
Sav1
Pex5l
Ankrd53
Foxp2
Plcl1
B4galnt3
Mdm4
Itpkc
Coq8b
Suz12
Mindy2
Mex3a
Cdc42ep2
Actn1
Cand2
Map3k20