ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX15057960 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◢ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◢ SRX7546913: ES cells

◢ SRX7546914: ES cells

◢ SRX823607: ES cells

◢ SRX12142046: mESCs, differentiated

◢ SRX12142051: mESCs, differentiated

◢ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◢ SRX15057958: mESCs, differentiated

◣ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Cd38
Alg14
Cldn34d
Ufsp1
Gatad2a
Timp4
Gata4
Gid4
Atrn
Man2a2
Letmd1
Gm4861
Asxl1
Prdm4
Pabpc1
Gdap1l1
Car14
Znrf1
Eno1
Trabd
Smc6
Gen1
Lama1
Donson
Apbb2
Fgf5
Irgm2
Acp5
Trim62
Zfp410
Chd1
Arfgef1
Sbk1
Apc
Wrap53
Trp53
Ywhae
Hes7
Gm9736
Mrpl23
Rbm47
Glul
Ints9
Hmbox1
Irgm1
Grb2
Terf2
Colec12
Zcrb1
Pphln1
Sfxn2
Arl3
Slc7a7
Vezt
Fgd6
Itm2b
Setd5
Mkx
Flywch1
Tbc1d5
Pxdc1
Ubtf
Spata24
Tagln3
Zfp964
Ppp1r16a
Foxh1
Klhl1
Cpt1a
Sp5
Mpi
Marcks
Qpct
Hcfc2
G2e3
Wdr59
Mreg
Ddx20
Slc12a4
Marchf7
Wsb2
Hsd11b2
Nkiras2
Dnajc7
Gm9639
Gm19668
Pitx3
Gbf1
Sh2d5
Adnp2
Pcif1
Fbxo5
Faim
Dynll2
E030030I06Rik
Coq2
Enpp4
Pacsin2
Pdcd2
Schip1
Kif17
Ndufaf4
Ptprz1
Slc25a4
Tmc7
Macroh2a2
Chrac1
Exoc6b
Abl1
Tbc1d9
Wipi2
Lypla1
Mmp25
Mios
Prkag1
Ptch2
Arid3c
Arap2
Tbc1d10b
Mylpf
Mdm4
Brms1l
Fstl1
Snrnp70
Gm10318
Ptpdc1
Mapk3
Slc37a3
Rab19
Polg2
Tmem121
Slc6a16
Cd37
Pik3r3
Atp1a2
Ndrg1
Ifitm1
H3f3a
P3h1
AU022252
Mrc1
Zfp9
Rnf125
Zdhhc6
Vti1a
Notch2
Arhgap32
Tmed7
Eif1a
Ptpra
Slc26a8
Mapk14
R3hdm2
Plcxd1
Tfpi
Asap2
Cep70
Rps6ka3
Tmem131l
Cdkn2aip
Rtcb
Mbp
Psmb10
Ctrl
Mpped2
Shoc2
Bbip1
Sh3rf1
Mycn
Kdm2b
Pmaip1
Abl2
Hipk2
Epha1
Tanc1
H2az2
Nudt1
Hook2
Ncoa1
Pde3a
Kif5c
Gm3250
Pnrc1
Arl2
H1f2
Neurog3
Lefty1
Tmco4
Ncdn
AU040320
Slc14a1
Radil
Frzb
Cfap300
Cerkl
Slc16a9
Prelid3a
Trip12
Fbxo36
Mthfd2l
Ccdc30
Pum3
Slco5a1
Ncs1
Col13a1
Trim36
Trappc5
Fcor
Pum1
Cachd1
Rnf114
B3gnt7
Brinp1
Fbxl7
Mterf1b
Dennd1a
Tsga10
Arhgap42
Gm3285
Prrc2b
Stk32a
Cacng2
Cul5
Lifr
Gm9508
Cep55
Mup4
Lzts2
Zfp980
Mab21l1
Snn
Bcl7b
Acot11
Pdrg1
Setd1b
Coil
C1ql1
Ror1
Pdgfra
Mbd3
Skil
Phlpp2
Ddah2
Tdrd3
Tmem62
Fgfr2
Ednrb
Rheb
Klf5
Pdpr
Enah
Dpp10
Arhgap24
B3gnt4
Phf10
Tada1
Cort
Strn3
Ap4s1
Pdia3
Catsper2
Fgf6
Ppp2r5b
Cdkl2
Spry2
Agfg1
Soga3
Zbtb25
Zbtb1
Rnf220
Rnf8
Tenm4
Olfr1034
Ppp2r3a
Gm3233
Smarcd1
Tal2
Cds1
Adam22
Usp37
Cnot9
Grin2c
Sema6a
Mapre2
Lsmem2
Vrtn
Rasgrp3
Atxn3
Lrrc8d
Snx17
Eif2b4
Nr2f6
Pcdhgb6
Pcdhga10
Adgra2
Kif13b
Mapk4
Serpini1
Pdcd10
Slc12a2
Mterf1a
Mea1
Klhdc3
Tef
Chid1
Gdpgp1
Cib1
Ubr5
Ccer2
Zfp868
Pdp2
Hdac1
Speer4f1
Gm9507
Gm2696
Myo10
Trmt1
Nacc1
Fam107a
Rpp14
Htd2
Igsf6
Garre1
Hnrnpa2b1
Cbx3
Cacng7
Hif3a
App
Tmem59l
Crlf1
Apoe
Exd2
C2cd2
Spdef
Vdac3
Ppp1ccb
Ppp1cc
Slc9a3r1
4930402H24Rik
Pbk
Wdr61
Ppp2ca
Smarca1
Casc3
Epn3
Ap2m1
Pou2f1
Smad7
Syne1
Crocc
Kcnn2
Slc39a4
Msc
Ypel1
Krtap10-4
Srrm4
Hoxa2
Tfeb
Rtkn
B3gnt2
Lhx1
Zfp976
Mturn
Ppp1r36
Prr5
Tmem119
Golm2
Tmeff1
Foxa2
4930474N05Rik
Mcf2l
Cx3cl1
Cdh1
Kctd6
Mllt1
Scd1
Nphp3
Srd5a3
Pald1
Trh
Ptch1
Dmtn
Slc4a2
Cdk5
Wnt11
Ccdc60
Gpr108
Trip10
Tor1b
Pef1
Parp6
Pgrmc2
Pygo2
Lrrn4
Zfand6
Raet1e
Raet1a
Tgfbr1
Mpc1
Flrt2
Cltb
Chst15
Ccno
Tvp23a
Ptpn14
Actn1
Ttc28
Tor4a
Ttc21b
Nodal
Rab4a
Gbx2
Ltb4r2
Ltb4r1
Cideb
Sptb
Asah2
Smad4
Mafg
Tmem161a
Pou5f1
Ptms
Got2
Hapln4
Lrrc4b
Naa16
Jade3
Prex1
Prnp
Prn
Loxl3
Dok1
Aktip
Ralgps2
Fam227b
Dtwd1
Hsdl1
Dnaaf1
Tle6
Wnt3
H2-DMa
Brd2
Ropn1l
Enpp3
Tff3
Msh6
Spink2
6820408C15Rik
Zcchc3
Cd24a
Napepld
Lgmn
Gsx1
Appl2
Dnajc10
2300009A05Rik
Hivep2
Cep112
Sec22b
Poc1b
Galnt4
Stmn1
Mapk8
Plk3
Cdhr1
Ttc9b
Scrt2
Fam136a
Dab2ip
Kcnq3
Ccn2
Hnrnpll
Glra1
Cd47
Kcnip4
Tprn
Grid2ip
Fam118a
Ncor2
Igsf23
Map3k20
Spaca6
B4galt2
Atp6v0b
Capg
Neil1
Actr10
Defb46
Ralb
Akt2
Fut4
Epb41l2
Zbtb22
Tapbp
Trim25
Rasgrp2
Cyp27a1
Znhit2
Mrpl49
Fau
Slc22a23
Mamstr
Vsir
Ssh1
Chn1
Sorbs3
Pvr
Atg5
Tent5c
Gimap3
Ctr9
Zfp978
Zfp991
Olfr1028
Mtfp1
Meaf6
Phc2
C4bp
Zfp64
Asap1
Prom1
Nkx3-2
Mib2
Emb
Rbm24
Ptk7
Ift140
Cramp1l
Dmap1
Coro2a
Slc13a2
Lfng
T2
Acta1
Hsbp1l1
Gna14
Ms4a10
Mt1
Adamts7
Kctd9
Cdca2
Gngt2
Abi3
Fn1
Trim68
Spag4
Cep63
Anapc13
Fam178b
Zfp286
Klhdc8b
Ccdc71
Serpinf2
Picalm
Sugt1
Atp1b2
Gab2
Slc25a47
Brwd1
Usp13
Sdc4
Spg20
Utp14b
Acsl3
Retreg1
Cd160
Dnmt3a
Mllt6
Stx11
Tab1
Tmem42
Dgkd
Raph1
Srpr
Foxred1
Rrbp1
Tmem199
Poldip2
Cuedc1
Gpsm2
Cnn3
Usp10
Zfp62
Sec22c
Rab37
Shroom3
Slc7a9
Stc2
Slc25a24
Crabp2
Dnaaf3
Pus3
Ddx25
Nbea
Socs5
Ltc4s
Cox8b
Kcnj4
Zfp341
Adamts20
Pelp1
Unkl
BC003965
Epb41l1
Tchh
Abi2
Itpkc
Coq8b
Spint1
Recql4
Lrrc14
Reep2
Phyhipl
Syde2
Ccdc9
Dleu7
Rmi1
Hnrnpk
Foxf1
Nsrp1
Slain2
Cyp51
Esrrg
Dcaf11
Tmem104
Nat9
Msh5
Clic1
Zfp36
Slc66a2
Zbtb7b
Rcsd1
Fnta
Bcl10
Efemp1
Lpgat1
Ntng1
Tcirg1
Col27a1
Rragc
Ppp3cb
Aoc3
Rps10
Smarce1
G0s2
Phf20
Nostrin
Jak2
Ptk2b
Mad2l2
Draxin
Gjc1
Cd300lg
Abca8b
Rassf8
Rbm45
Rtn4rl1
Dph1
Vmn1r1
Klhl34
Uhrf1bp1
Myrip
Castor1
Rrm2
Pik3cd
Zyg11a
Zfp600
Cluh
Clasp1
Cfap20dc
Zbtb8a
Dusp4
Usp36
Mfap3l
Fbxl19
Med12l
Dhrs7b
Wbp4
Elf1
Fignl2
Synj2
Ost4
Mesp1
Efna3
Tfap2c
Plb1
Slc25a22
Tpm1
Umad1
Rpa3
Tlr2
Rif1
Foxp1
Mtfr1l
9930012K11Rik
Tmem63b
Mrpl14
Timm44
Mrps15
Slc30a9
Mylk2
Ptpn13
Dbx2
Duxbl3
Duxbl2
Duxbl1
Abcc4
Csrp2
Zkscan6
Dner
Pcgf6
Cux2
Fahd2a
Gas2
Fancf
Gpr179
Prmt8
Tspear
Gm19402
Rassf4
Tmem229a
Kcnc2
Snai1
Cspp1
Cops5
Plaat3
Ndufab1
Zfp217
Slc9a3
Tbl1xr1
Smim1
Tdh
Hr
Hoxc13
H3c13
H2bc18
Fbxo11
Olfr52
Zhx1
Otop1
Prr19
Tmem145
Wdr54
1700003E16Rik
Mical1
Gm17660
Il17d
Ust
Immp2l
Xbp1
Kctd12
Rad52
Fam171a1
Dydc2
Lrrc8b
Ctxn2
Cand1
Gne
Nkx2-5
Nid2
Col26a1
Nrp2
Ugp2
Hoxb13
Olfr813
Eif4e
Zfp267
Phldb1
Yars2
Fam90a1b
Apoo
Psd3
Gm3238
Dctn4
Ap1g2
Coa4
Zfp839
Slc23a1
Rnf11
Pramel13
Arrb1
Tmem121b
Mob4
Thsd7a
Zeb2
Inf2
Hmx3
Tnni1
Kcnc1
H2-T-ps
P2ry1
Pcdh8
Wiz
Zfp36l2
Csnk2a1
Slc35d1
Cd63
Tfg
Wscd2
Vps37d
Ap1g1
Stra6
Angpt1
2210016F16Rik
Shisal1
Pax1
H3c15
H3c14
H2ac19
H2ac18
Ehmt2
Zbtb12
Tox3
Cox5a
Sall4
Per3
Mtarc1
BC048679
Ap3b2
Gm10100
Maz
Klhl22
Fads1
Phf12
Trim8
Onecut2
Prmt9
Epb41l4a
Zswim7
Ttc19
Dhx32
Gna13
Ddb2
Slc25a17
Kank2
Glipr1l3
Caps2
Gm3739
Ndrg4
Tle4
Trerf1
Cpsf4l
Sap18b
Sap18
Tulp4
Rmnd5b
Tdgf1
Lrrc2
Hmgxb4
Ppat
Paics
BC107364
Aff4
Serpina12
Megf8
Rnaset2b
Rnaset2a
Hoxb3
Syne2
Proser2
Ephx2
Tha1
Rnasek
0610010K14Rik
Bcl6
Klhl2
Scaf11
Nfkb1
Mybph
Plcb4
Gabrb3
Susd2
Iqch
Aagab
Ssr1
Myo1b
D5Ertd579e
Inafm2
Slc4a5
Zfp532
Cxxc5
Exosc6
Vrk1
Mnx1
Pkm
C1ql3
Rnaseh2b
Ago3
Usp44
AI661453
1700001C19Rik
Lpar2
Adnp
Adcyap1
Egr3
Rgs12
Nup85
Snap29
Pi4ka
Adm
Aqp11
Sall2
Slc46a3
Racgap1
Mink1
Rtl8c
Inha
Obsl1
Pdha1
Tcf7l2
Smim5
Cbs
Ccdc102a
Adgrg5
Tmem181a
Tle2
Pms1
Ormdl1
B3galt1
Spef1
Tmem200c
Fermt2
Mgat1
Mob1a
Rnf38
Fhl3
Ackr3
Clip4
Tafa3
Ppm1j
Trim7
Baz1b
Tbx1
Tiparp
Ido1
Cdr2l
Stat5b
Set
Hnrnpr
Casz1
Zdhhc2
Kcnab3
Trappc1
Cntrob
Irx2
Scrt1
Icam5
Icam4
Pth2r
Fbrsl1
Ksr2
Pcmt1
Lats1
Gse1
Slc17a5
Fam241b
Hhip
AI413582
Ptdss2
Bloc1s5
Srpx
Rbpjl
Matn4
Zfp979
Zbtb24
Cmas
Zfp319
Usb1
Cep192
Dgkh
Oplah
Glis3
Rhbdf1
Mpg
Setx
Gja4
Trim72
Tctex1d1
Suz12
Hinfp
Tgfbr3
Nynrin
Armc4
Atoh8
Wdr86
Myo5b
Plag1
Chchd7
Ptpn3
Zfp663
Kazn
Exoc7
Smarcd3
Dsn1
Scgn
Cela2a
Gosr2
Il17rd
Tsc22d3
Plekhg5