ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX12142055 | mESCs, differentiated
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◢ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◢ SRX7546913: ES cells

◢ SRX7546914: ES cells

◢ SRX823607: ES cells

◢ SRX12142046: mESCs, differentiated

◢ SRX12142051: mESCs, differentiated

◣ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◢ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Cldn34d
Alg14
Gdap1l1
Ufsp1
Trabd
Gata4
Gm9736
Eno1
Igsf6
Car14
Atrn
Cd38
Man2a2
Gm3250
Mesp1
Gatad2a
Timp4
Gm9639
Gm19668
Gid4
Letmd1
Znrf1
Macroh2a2
Ppp1r16a
Foxh1
Fgfr2
Rnf220
Gm10318
Notch2
Tfpi
Wrap53
Trp53
Sh2d5
Donson
Prdm4
Lama1
Meox1
Sbk1
Tbc1d5
Tmc7
Atp1a2
Pdgfra
Gm10100
Tor1b
Pabpc1
Zfp964
Tox3
Gm3233
Krtap10-4
Spata24
Mapk3
Vezt
Fgd6
Apbb2
Ubtf
Abl1
Grin2c
Colec12
Ywhae
Smc6
Gen1
Cul5
Asxl1
Setd5
Cx3cl1
Tnni1
Mrpl23
Mkx
Rbm24
Inf2
Ints9
Hmbox1
Ddx20
Klhl1
Ptch1
Hcfc2
Nudt1
Susd2
Acp5
E030030I06Rik
Gm9508
Gm3285
Dleu7
Pacsin2
Slc26a8
Mapk14
Zfp410
Tenm4
Ccdc102a
Adgrg5
Atoh8
Efcc1
Chd1
Marchf7
Grid2ip
Wdr54
1700003E16Rik
Irgm2
Coq2
Arfgef1
Prelid3a
Hoxb1
Arl2
Ptprz1
Lef1
Kcna2
Mpi
Lrig3
Mios
Ndufaf4
Rasgrp3
Prr5
Flywch1
Clip4
Pcp4
Hnrnpll
Chst15
Pigv
Ptpra
Tdrd3
Gm4861
Qpct
Prrx2
Fbxl7
C4bp
Ddah2
Gse1
Sfxn2
Arl3
Grb2
Wdr59
Zfp9
Lamb3
Phlpp2
Srrm4
Foxp1
Tspear
Gm19402
Tagln3
Hsd11b2
Apc
Sp5
Sclt1
D3Ertd751e
Sparcl1
Ifitm1
Dbh
Tmem121b
Zdhhc6
Vti1a
Gm9507
Gm2696
Adgra2
Fbxo5
Prkag1
Pcif1
H3f3a
Tmem121
Marcks
Itm2b
Acot11
Mapre2
Mpped2
Enpp4
Arhgap32
Nostrin
Adnp2
Pdia3
Catsper2
Meis3
Sorbs3
Mrc1
Gdpgp1
Cib1
Faim
Terf2
H1f2
Zfp975
Glul
Ptch2
Ppp2r5b
Krtap3-2
Ncoa1
Chrac1
Slc12a4
Mbd3
Exoc6b
Rnf114
2300009A05Rik
Casz1
Stra6
Abl2
Tmem62
Nkiras2
Dnajc7
Tanc1
Frzb
Rtkn
Gpsm2
Slc11a1
Wbp4
Elf1
Apool
Gm3238
Polg2
Pbk
Arg1
Prickle1
Gpr179
Omp
Zfp976
Sh3rf1
Ugp2
Hipk2
Col13a1
Setd1b
Rhof
Abca9
Sort1
Wipi2
Il6ra
Hoxb3
Plb1
Tbc1d10b
Mylpf
Ndrg1
Ssh1
Igdcc3
Nbea
Cacng2
Cdkn2aip
Ppp2ca
Actn1
Mdga1
Ccn2
Tmem63b
Mrpl14
Atxn3
Tff3
Pdcd2
Pxdc1
Coro2a
Phf10
Rnf125
Ptk7
Arhgap42
Fam227b
Dtwd1
Mthfd2l
Mapk8
Inha
Obsl1
Zfp91
Lpxn
Slc37a3
Rab19
Klf5
Zbtb22
Tapbp
Zbtb25
Zbtb1
Tsga10
Fam117a
Hes7
B3gnt2
Dynll2
Ypel1
Duxbl3
Duxbl2
Duxbl1
Pum1
Cachd1
Tmco4
R3hdm2
Ncdn
AU040320
Tmem119
Rheb
Dlc1
Arap2
Usp13
Pgrmc2
Nova1
Hoxa2
Acta1
Ralb
Lyzl6
Tle4
Mllt1
Slc14a1
Hs3st3a1
Appl2
Vsir
Flacc1
Dennd1a
Tef
Fstl1
Fnta
H2az2
Coil
Pdxdc1
Mpv17l
Lzts2
Stc2
Serpina12
Csrp2
Efna3
App
Trappc5
Fcor
Garre1
Cep70
Rpp14
Htd2
D5Ertd579e
Slc25a44
Ednrb
Erc1
Pdp2
Spink4
Brinp1
Smad7
Sema6a
Slc16a9
Mab21l1
Snai1
Calu
G2e3
Pnrc1
Tmed7
Eif1a
Ywhag
Cd24a
Sod3
Gas1
Cacng7
Spry2
Ccdc30
Cox5a
Tbc1d9
Rad52
Pde3a
Zfp868
Golm2
Zkscan5
Zkscan14
Pum3
Ppp2r3a
B4galt2
Atp6v0b
Tcf7l2
Speg
Adcyap1
Zfp36l2
Tgfbr1
C1ql1
Tmem42
Lfng
Znhit2
Mrpl49
Fau
Abca8b
Igsf23
Got2
Cpox
Prnp
Prn
Naa16
Slc18a3
Chat
Mreg
Chid1
Usp32
Accs
Gm36176
Rtcb
Kif5c
Spg20
Tmub1
Fastk
Adnp
P3h1
AU022252
Nhsl2
Bcl7b
Brms1l
Parp6
Smarcd3
Kcnab3
Pkm
Trappc1
Cntrob
Flrt2
Hmga1b
Hmga1
Eif4e
Snn
Rest
Mn1
Asap2
Hnrnpa2b1
Cbx3
Pdpr
Wdr61
Pald1
Rbm47
Adamts20
Atp1b2
Dnajc10
Bcl10
Lrrc8d
Proser2
Cfap300
H3c15
H3c14
H2ac19
H2ac18
Soga3
Vrk1
Inafm2
Phc2
Foxf1
Trmt1
Nacc1
Dtx1
Fads2
Pitx3
Gbf1
Rcsd1
Hapln4
Neurog3
Zfp62
Tmem229a
Mdm4
Sema3g
Nkx2-5
Epb41l2
Mterf1a
Fn1
Msra
Setx
Gna14
Krtap10-10
Epn3
Shroom3
Cpt1a
Asap1
Fgf6
Prom1
Thsd7a
Tha1
Snrnp70
Abr
Trim36
Fscn1
Zfand6
Rbms1
Krtap3-3
Reep2
P3h2
Lrrc38
Fam178b
Ctdsp2
Ap1g2
Cyth1
Cand2
Ccdc66
Tmem131l
Tab1
Mad2l2
Draxin
Lrp2
Atg5
Mtfp1
Ptdss2
Spag4
Dusp4
Stx11
6820408C15Rik
Zcchc3
Kcnq3
Glipr1l3
Caps2
Clcn4
Sugt1
Tgfb2
Tulp4
Shoc2
Bbip1
Hdac1
Zhx1
Rmi1
Hnrnpk
Lpgat1
Kdm2b
Iqcf6
Cxxc4
Rnase4
Ang
Cdyl
Glra1
Ppp1ccb
Ppp1cc
Pcdh19
Raph1
Cers3
Pcgf6
Kctd9
Cdca2
Gm2237
Togaram1
Klhl28
Dcaf11
Ptpn14
Kctd12
Prtg
Sun1
H3c13
H2bc18
Krba1
Pbx1
Kmt2a
Csrp1
Prmt9
Flnc
Neurl1a
Gm11559
Rnf8
Aktip
Usp37
Cnot9
Psd
Fbxl15
Zfp286
Neil1
Nphp3
Lamb1
Pygo2
Bloc1s5
Slc6a16
Cd37
Ttc21b
Ptpdc1
Ssbp2
Slc22a6
Clasp2
Usp36
Ncor2
B3gnt4
Tpm1
Vpreb3
Gm867
Lhx1
Trim68
Jak2
Itpkc
Coq8b
Mterf1b
Gna13
Gm17660
Armc4
Smarce1
Lifr
Phf20
S1pr5
Gsx1
Dab2ip
Hectd1
Mob4
Rnaseh2b
Glrx3
Schip1
Per3
Col26a1
H2bc6
H1f4
Umad1
Rpa3
Mamstr
2510009E07Rik
Foxo6
Epha2
Casc3
Utp15
Ankra2
Nudt9
Zbtb18
Pdik1l
Mapk4
Slc25a47
Pvr
Zfp687
Ncoa2
Raf1
Rrm2
Grip1
Slc35g2
Camta2
Meis1
Mafg
Tbc1d4
Ulk2
Wnt2
Zfpm1
Rmdn1
Cpne3
Gm10267
Btbd7
C2cd2
Gm11568
Gbx2
Sf3a1
Ccdc157
Serpini1
Pdcd10
Map3k20
Slain2
Adck5
Slc7a7
Scrt2
Bcl6
Cpxm1
Col5a1
Lrrn1
Pkn2
Zfp319
Usb1
Sowahc
Septin10
Hes6
Mbp
Gpr108
Zfp787
Rad51ap1
D6Wsu163e
Vdac3
Ccdc60
Cand1
Mogat2
Dph5
Pax7
Arhgap6
Pm20d2
Trerf1
Dctn4
Slc66a2
Mycbp2
Zdhhc2
Epha4
Nkx3-2
Borcs5
Zfhx3
Fahd2a
Rbpjl
Matn4
Tlr2
Scd1
Slc25a22
Akt2
Dtnbp1
Slc12a2
Lgmn
Zfp35
Ust
Scaf11
Ghitm
Mical1
Ehmt2
Mob1a
Zbtb12
Yod1
Pfkfb2
Jade1
B4galt7
Arid3c
Pcmt1
Lats1
Gpr142
Calr4
Pik3r3
Cxxc5
2700081O15Rik
Brwd1
Dbx2
Exd2
Epha1
Adm
Prob1
Mzb1
Plekhh1
Zeb2
Tafa3
Ppm1j
Itgb7
Mfap3l
Triobp
Anp32a
Gm20346
Ppdpf
Ndnf
Fbrsl1
Immp2l
Msh5
Clic1
Msh6
Hmx3
Soat1
Tbl1xr1
Slc4a2
Cdk5
Zmynd8
Dgkh
Sulf1
Tmem161a
Fbxo11
Taf6l
Coa4
Kcnj4
Lrrc4b
Pdrg1
Srd5a3
Cd47
AI413582
Septin2
Hdlbp
Onecut2
Rab4a
Epop
Mt1
Rab11fip1
Smarca1
Dmap1
Nynrin
Otud4
Foxa2
Fbxl19
Rnasek
0610010K14Rik
Wnt2b
Dll3
Cd63
Sdc4
Smtn
Kcnn2
Picalm
Slc31a1
Fkbp15
Cfap20dc
2310022B05Rik
Rybp
Wdr86
Ntng1
Cort
Spint1
Tcirg1
Slc25a24
Coch
Sorcs3
Park7
Pramel13
Syne2
Cct2
Pde5a
Pelp1
Mylip
Napepld
Mmp15
Socs5
Afap1
Aaas
Oxct1
Setdb2
Gm45935
Cab39l
Rffl
Rbm45
Ezh1
B3gnt7
Slc9a3r1
Bcap31
Abcd1
Rnf103
Arx
Abi2
Sec22c
Ube2d1
Nodal
Sox12
Ttc28
Rrbp1
Tmem98
Rassf4
Slc25a36
Col12a1
Smad4
Zkscan6
Dpf1
Cdhr1
Klhdc8b
Ccdc71
Gm4981
Trip10
Rpl10a
Tada1
Loxl3
Dok1
Gnaq
Cnn3
B4galt1
Asah2
Tchh
Gm11567
Tmem256
Nlgn2
Prkag2
Zfp365
Ift140
Cramp1l
Ndfip2
Cc2d2a
Agfg1
Capg
Snx17
Eif2b4
Tmem104
Nat9
Tcf20
Tsc22d3
Xpo6
Mllt10
Cdk6
Barhl1
Slc2a9
Klhl22
Slc24a3
Fkbpl
Kank2
Igfbpl1
Atad2b
Eif4g2
Map1lc3b
Ldlrad2
Psmb10
Ctrl
Plaat3
Wscd2
Nectin2
BC107364
Kcnj10
Timm44
Col27a1
Ltb4r2
Ltb4r1
Cideb
Fam90a1b
Apoo
Gpr84
Ano6
Pcgf1
Ap1g1
Tmem262
Zfpl1
Cdca5
Aoc3
Ipo8
Lhfpl2
Mink1
Slc12a5
Magi3
Atrnl1
Ror1
Hsdl1
Dnaaf1
Fam136a
Smad6
Fzd8
Epm2a
Twf2
Ppm1m
Pax6
Gpbp1
Fermt2
Fzd7
Tbx1
Sprr2a3
Fhl2
Rassf8
Dnttip2
Cnot2
Klhl15
Cep63
Anapc13
Reln
Zfp36
Plekha7
Ptdss1
Mterf3
Ppp3cb
Sbno2
Sgk1
Hes1
Pdha1
Pdzd2
Rnf216
Kcnip4
Septin3
Sema6d
Nkap
Fndc3c1
Ctr9
Tle2
Mkrn2
Camk2n1
Polr2b
Noa1
Evx2
Hook2
Pik3cd
Gab1
Tiparp
Nfatc3
Cdk19
G0s2
Arhgap24
Laptm4b
Tafa5
Tubb2b
Coa3
Cntd1
Mturn
Pitpnm1
Cdk2ap2
Rcc2
Ncoa7
Vwa2
Adamts7
Slc22a23
Cux2
Fitm2
Itpr2
Maml2
Hmgxb4
Arhgap33
Tprn
Ppat
Paics
Hsp90ab1
Klf4
Cdr2l
Fyn
Mib2
Atg12
Ap3s1
Prcc
Enah
Ltc4s
Numa1
Ndufab1
Yars2
Nsrp1
Adamts6
Col19a1
Cspp1
Cops5
Fam118a
Iqgap2
Malt1
Sec22b
Maz
Sh3bp2
P2ry1
Galnt16
Afg1l
Sema4b
Tle6
Gpr83
Abhd12
Zfp667
Shprh
Piwil1
Cd109
Aipl1
Prrc2b
Phf12
Sptssa
Asb4
Slc16a5
Hey1
Tox
Zfp24
Slc26a9
Wscd1
Fgf5
Adam22
Txndc12
Btf3l4
Krtap9-1
Slc9a3
Mtarc1
Trip12