ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX15057958 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◢ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◢ SRX7546913: ES cells

◢ SRX7546914: ES cells

◢ SRX823607: ES cells

◢ SRX12142046: mESCs, differentiated

◢ SRX12142051: mESCs, differentiated

◢ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◣ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Cd38
Alg14
Timp4
Cldn34d
Atrn
Gatad2a
Smc6
Gen1
Fgf5
Eno1
Pabpc1
Sbk1
Lypla1
Gid4
Ufsp1
Asxl1
Zcrb1
Pphln1
Letmd1
Enpp4
Man2a2
Zfp980
Slc7a7
Slc6a16
Cd37
Grb2
Mkx
Tal2
Ints9
Hmbox1
Gm4861
Znrf1
Irgm1
Wrap53
Trp53
Coq2
Slc37a3
Rab19
Donson
Rbm47
Ywhae
Wsb2
Mup4
Slc25a4
Wipi2
Lama1
Tbc1d5
Ubtf
Pacsin2
Pitx3
Gbf1
Itm2b
Snrnp70
Pcif1
Prdm4
Trabd
Frzb
Apbb2
Slc12a4
Cul5
Lefty1
Ptprz1
Vezt
Fgd6
Fbxo5
Stmn1
Ror1
Arfgef1
Zfp410
Adnp2
Rnf220
Zfp964
Ppp2ca
Phf10
Kdm2b
Spata24
Zfp600
Mmp25
Colec12
Apc
Marchf7
Exoc6b
Rnf114
Mycn
Inafm2
Mrpl23
Mdm4
Pou5f1
Ccno
Trim62
E030030I06Rik
Nudt1
Pmaip1
Zfp979
Flywch1
Tmco4
Abl1
Ptpra
Zfp36
Acp5
2610528J11Rik
Tmed7
Eif1a
Tbc1d10b
Mylpf
Mterf1b
H2-DMa
Brd2
Otop1
Zfp9
Pdcd2
Dhx32
Cyp51
Asah2
Syne1
Kif13b
Ddx20
Rpp14
Htd2
Tagln3
Sfxn2
Arl3
Smarcd1
Coil
Fstl1
Terf2
Trip12
Fbxo36
Ccdc60
Golm2
Chd1
Pnrc1
Arl2
Sema6a
Klf5
Soga3
Pxdc1
Shoc2
Bbip1
G2e3
Trim33
Lrrc8d
Faim
Enah
Abl2
Tmem59l
Crlf1
Cep70
Mios
Hook2
Polg2
Gata4
Kif17
Ndrg1
Mbd3
Mcf2l
Mterf1a
Pvr
Setd5
Tent5c
Notch2
Il17d
Pramel13
Cds1
Trh
Olfr1034
Glul
Mreg
Rnf8
Nkiras2
Dnajc7
Dynll2
Mapre2
Marcks
Zdhhc6
Vti1a
B3gnt7
Sptb
R3hdm2
Sp5
Ms4a10
Lrrn4
Gdpgp1
Cib1
Plcxd1
Slc39a4
Slc26a8
Mapk14
Pald1
Tmem131l
Ednrb
Phlpp2
Arap2
Ncdn
AU040320
H1f2
Smad4
Trappc5
Fcor
Nbea
Agfg1
Ttc21b
Tmem62
Sh3rf1
Setd1b
Ddah2
Irgm2
Arid3c
Prelid3a
Zfand6
Arhgap32
Coro2a
Asap2
Ksr2
Chrac1
Scd1
Snn
H3f3a
Hnrnpa2b1
Cbx3
Usp36
Pum1
Cdkn2aip
Usp37
Cnot9
Pou2f1
T2
Lifr
Lzts2
Nsrp1
Mapk4
Cerkl
Fbxl7
Trim25
Esrrg
Atxn3
Pum3
Qpct
Ephx2
Mpped2
Pdia3
Catsper2
Hoxa2
Rps6ka3
Ralb
Pelp1
Hcfc2
Gpsm2
Tmem63b
Mrpl14
Ccdc30
Spry2
Ncs1
Wdr59
Epb41l1
Tfeb
Parp6
Tgfbr1
Dnaaf3
Phc2
Zbtb22
Tapbp
Dpp10
Ifitm7
Bmerb1
Rmi1
Hnrnpk
C1ql1
Olfr813
Gngt2
Abi3
Slco5a1
Ptch2
Actn1
Smarca1
Enpp3
Zfp341
Radil
Pdpr
Mab21l1
Rmnd5b
Serpini1
Pdcd10
Brms1l
Myo10
Prmt9
Hnrnpll
Cpsf4l
Zfp868
Scrt2
Slc12a2
Zfp62
Serpinf2
App
Csnk2a1
Usp13
Tbl1xr1
Hoxc13
Ppp3cb
Neil2
Slc4a2
Cdk5
Efemp1
Usp32
Zbtb7b
Tmem121
2300009A05Rik
Espn
Ptprg
Kazn
Fbxo11
Rbm45
Exd2
Gja1
Ptk7
Hif3a
Epp13
Smad7
Prkag1
Rtcb
Slc19a3
Ubr5
Ccer2
Tab1
Dmtn
Pdxdc1
Mpv17l
Castor1
Aktip
Strn3
Ap4s1
Ropn1l
Tcf7l2
H2az2
Mpi
Hoxb13
Ppp2r5b
Rnf125
Loxl3
Dok1
Rheb
Ttc9b
Prss30
Prkar1a
Hsd11b2
Rab4a
Cpt1a
Col5a1
Pde3a
Dgkd
Ptpn13
Slc9a3
Ptdss2
Rasgrp2
Mea1
Klhdc3
Mthfd2l
Tmem42
Rab13
Znhit2
Mrpl49
Fau
Zfp532
Naa16
Ackr3
Zbtb25
Zbtb1
Gdap1l1
Garre1
Klhdc8b
Ccdc71
Mybph
Cdkl2
Pms1
Ormdl1
Camk1d
Ncoa1
Klhl1
Kcnj4
Dnmt3a
Itpkc
Coq8b
Cacng2
Gas2
Fancf
Mbp
Trim72
Cox5a
Msh6
Fam107a
Col13a1
Mib2
Slc16a9
Pik3r3
Spint1
Arhgap42
Timm44
4930474N05Rik
Ppat
Paics
6820408C15Rik
Zcchc3
Coa4
Tfpi
Dennd1a
Cfap300
Zfp64
Hipk4
Rtkn
Fam50b
Pdp2
Rif1
Tsga10
Prrc2b
Wdr61
Sec22c
Prickle1
Hsdl1
Dnaaf1
Flrt2
4930402H24Rik
Kcnn2
Vdac3
BC048679
Ap3b2
Bcl7b
Picalm
Chid1
Nat8f5
Fads1
Cyp27a1
Liph
Skil
Hdac1
Ptch1
Cd47
Smim5
Usp10
Kif5c
Zdhhc2
Shc1
Cks1b
Glra1
Mtfr1l
Fam241b
Srd5a3
Dlx6
Mturn
Tle4
Med12l
Emb
Dner
Kctd6
Zfp976
Stk32a
Tmeff1
Inha
Obsl1
Zfp267
Xpo6
Cdh1
Set
Akt2
Mapk8
Neil1
Capg
Gsx1
Ptpdc1
Foxd2
Tdrd3
Kcnq3
Fam160b2
Fam227b
Dtwd1
Tpd52
Chn1
Vgll3
Rtn4rl1
Dph1
Jund
Iqcn
Zfp839
Cdhr1
Snx17
Eif2b4
Hinfp
Ccdc194
Proser2
Tor4a
Tanc1
Casc3
Msc
H3c13
H2bc18
Tmc7
Duxbl3
Duxbl2
Duxbl1
Fgf6
Slc44a4
Ehmt2
Zbtb12
Krba1
Tprn
Trmt1
Nacc1
Tle6
Rragc
Tcirg1
Smim1
Pcbp2
Slc35f2
Mmp15
Mllt6
Oplah
Ddx60
Nphp3
Cltb
Gimap3
Trim68
Sdc4
Nr2f6
Vmn1r1
Socs5
Csk
Phc1
Ust
Rgs12
P3h1
AU022252
Mapk3
Stat5b
Sox7
Hipk2
Tubb5
Mdc1
Brinp1
Dctn4
Lrrc8b
Pcdh8
Mink1
Vrk1
Arid4b
Zfp978
Zfp991
Ssh1
Fam136a
Car14
Meaf6
Cd24a
Tmem121b
Malt1
Togaram1
Klhl28
D5Ertd579e
Adam22
Secisbp2l
Fbrsl1
Cfhr3
Zyg11a
C2cd2
Plk3
Cluh
Tfap2c
Pik3r4
Pef1
Pygo2
Eif4e
Ccn2
Hmga1b
Hmga1
Kctd9
Cdca2
Jak2
Gpr108
Trip10
Rab37
Hcn1
Rock2
Arhgap24
Phyhipl
Unkl
BC003965
Dab1
Apoe
Kcnh8
Pdha1
Mob1a
Adamts20
Ccdc177
Ptpn14
Fam178b
AI661453
1700001C19Rik
Icam1
Pgrmc2
Spg20
Appl2
Dcaf11
Napepld
Mafg
Rragd
Krt17
Ctxn2
B4galt1
Mt1
Epn3
Kat7
Rnaset2b
Rnaset2a
Ttc14
Bcl10
Zfp981
Fahd2a
Pkm
Galk1
Smarcd3
Dgkh
Ankle2
Slc25a22
Pcgf6
Dvl1
Faap20
Nup85
Fnta
Pik3cd
Immp2l
Ltb4r2
Ltb4r1
Cideb
Pnkd
Igf2bp3
Aamp
Tbc1d9
Tada1
Irx2
Ost4
Cacng7
Parp8
Cct2
Per3
Cga
Slc46a3
Slc30a9
Umad1
Rpa3
Tfg
Nid2
H3c15
H3c14
H2ac19
H2ac18
Cuedc1
Hmgxb4
Ccdc3
Mnx1
Sfn
B3gnt4
Cand2
Spdef
Ppp2r3a
Zfp36l1
Rgl2
Fn1
Chst15
Jakmip1
Retreg1
Hectd1
Sec22b
Hivep2
Psd3
Nadk2
Zfp91
Lpxn
Ypel1
Tdgf1
Lrrc2
B4galt2
Atp6v0b
Klhl34
Cnn3
Stx11
Phf20
Suz12
Rsph4a
Utp14b
Acsl3
Rab33b
Ppara
Rps10
AI413582
Clcn4
Hr
Stc2
Ctdsp2
Ap2m1
Ift140
Cramp1l
Ntng1
Aff4
Tmem161a
Chrna9
Il18
Bco2
Nkx2-5
Slc4a5
Slc27a2
Zfp977
Fgfr2
Sbk2
Atg5
P2ry1
Ddx3x
Dna2
Rev3l
Olfr1028
Galnt12
Poc1b
Galnt4
Scaf11
Mical1
Trim36
Asap1
Speer4f1
Csrp2
Prmt8
Slc22a23
Skor1
Slc40a1
Btbd1
Zkscan5
Zkscan14
Adam12
Kiss1
Mov10
Ltbp4
Tulp4
Erc1
Iqcc
Ccdc28b
Dcdc2b
Rufy3
Pdk1
Ptpn3
Bcat2
Aoc3
C1ql3
Sema4d
Esrp2
Gm2237
Slc13a2
Ctf1
Bcl7c
Sntb2
Entpd4b
Entpd4
Mllt1
B3gnt2
Mfap3l
Fignl2
Sf3a1
Ccdc157
Ubtd1
Mms19
Got2
Cxcl11
Zfp787
Cux2
Tmem199
Poldip2
Sugt1
Slc25a44
Gja4
9930012K11Rik
Klc3
Scrt1
BC107364
Wtap
Kmt2c
Gm3739
Rhbdf1
Mpg
Fem1c
Eml6
Ttc28
Ndufa6
Pus3
Ddx25
Gm3173
Ran
Tpm1
Sowahc
Septin10
Lsm8
Clip4
Ppp1ccb
Ppp1cc
Plekhh1
Slc23a1
Macroh2a2
Tle2
Srpr
Foxred1
Lypd6b
Septin2
Hdlbp
Tmem175
Gak
Slc14a1
Fam222b
Uqcrq
Gdf9
Ctr9
Cd63
Raph1
Adgra2
Tvp23a
Mettl9
Pias3
Atrnl1
Abca8b
Mnt
Cds2
Cand1
Yars2
Recql4
Lrrc14
Tchh
Gapvd1
Thsd7b
Trim7
Fam118a
Nefh
Ap1b1
Fgf4
Dnah2
Lrrn2
Nkx3-2
Soat1
Ccpg1os
Ccpg1
Ndufab1
Rassf8
Hnrnpu
Dhrs7b
Clasp1
Ipo8
Rimbp3
Impdh2
Cass4
Arrb1
Psap
Mob1b
Gna13
Plxna1
Kank2
Cenpb
Fam20b
Usp44
Trim13
Zbtb8a
Kcnab3
Trappc1
Cntrob
Ndufaf4
Cd300lg
Rcc2
Sox2
Rrm2
Tmem189
Exosc6
Srsf2
Mfsd11
Baz1b
Herc6
Paip1
Uhrf2
Tob1
Rps23rg1
Slc9a3r1
Ugp2
Ccdc9
Cdk6
Raet1e
Raet1a
Zfp996
Schip1
Tef
Pdpn
1190005I06Rik
Parp12
Zfp687
Ube3c
Epm2a
Ltc4s
Teddm3
Lpgat1
Zfp217
Herpud2
Mzt1
Cmas
Adamts6
Mrps15
Klf4
Gzme
Tmem229a
Cltc
Igfbpl1
Steap3
Smtn
Htr2a
Gm10406
Phldb1
Fam90a1b
Apoo
Neurog3
Slc66a2
Casq2
Dpf3
Gmeb2
Pcbp1
Fzd10
Ccdc6
Extl3
Nfat5
Mrps23
Col27a1
Afap1l2
Fbxo25
Dab2ip
Maz
Prrt2
Phlda3
Timm9
2700049A03Rik
Mkrn2
Dusp4
Tdh
Pou3f3
Strn
Rorb
Col2a1
Myo1e
Ncoa2
Ifitm1
Ptdss1
Mterf3
Spag4
Kcng3
Cdk13
Glipr1l3
Caps2
Rnf103
Foxo6
2210016F16Rik
Tmem178
Fadd
Foxf1
Reep2
Prr19
Iqgap2
Tmem145
Atad2b
Rnf11
Nectin2
Fitm2
Smndc1
Slc25a17
Magi3
Bcl6
Trim8
Trmt61a
Cnbp
Zfp36l2
Shox2
Rsrc1
Dpf1
Cox8b
Map3k20
Itga1
Eif4g2
Mlf2
Prex1
Pbld2
Hnrnph3
Pdpk1
Mpc1
Mtfp1
Wdr20
Mamstr
Atp1a1
Mael
Nanog
Defb46
Phf12
Tmem168
Klhl22
Tnk2
Cachd1
Numa1