ChIP-Atlas: Target genes

Potential target genes for Lhx3

Query protein: Lhx3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1706953 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Lhx3's Target genes

◢ Lhx3: Average

◢ SRX1706941: mESCs, differentiated

◢ SRX1706942: mESCs, differentiated

◢ SRX1706944: mESCs, differentiated

◢ SRX1706945: mESCs, differentiated

◢ SRX1706946: mESCs, differentiated

◢ SRX1706947: mESCs, differentiated

◢ SRX1706952: mESCs, differentiated

◣ SRX1706953: mESCs, differentiated

◢ SRX1706958: mESCs, differentiated

◢ SRX1706959: mESCs, differentiated

◢ SRX1706965: mESCs, differentiated

◢ SRX1706966: mESCs, differentiated

◢ SRX1706967: mESCs, differentiated

◢ SRX1706968: mESCs, differentiated

◢ SRX1706974: mESCs, differentiated

◢ SRX1706975: mESCs, differentiated

◢ SRX1706976: mESCs, differentiated

◢ SRX2388060: mESCs, differentiated

◢ SRX2388063: mESCs, differentiated

◢ SRX2388064: mESCs, differentiated

◢ SRX2388067: mESCs, differentiated

◢ SRX2388068: mESCs, differentiated

◢ SRX2388069: mESCs, differentiated

◢ SRX2388070: mESCs, differentiated

◢ SRX2388071: mESCs, differentiated

◢ SRX2388072: mESCs, differentiated

◢ SRX2388074: mESCs, differentiated

◢ Lhx3: STRING

Kank1
Snx18
Nhsl1
Esrrb
Mcf2
Cldn34d
Sepsecs
Mpi
Kcng3
Nfe2
Pakap
Ubxn10
Pla2g2c
Zfp879
Rab38
Nnt
Phc1
Nrf1
Hoxc10
Rbm27
Akap17b
Frmd4a
Gja5
Lrrc52
Lmo3
Slc25a40
Dbf4
Bsx
Krt8
Kpna1
Mpp4
Bin2
Rasl11a
Cars
Pdlim3
Sash1
Gm4791
Ypel1
Lmo4
Irgm2
Sipa1l1
Gm17124
Htr3a
Plekhh3
Cntnap1
Ccr10
Gm17026
Sostdc1
Zcrb1
Pphln1
Kcnn2
Pmfbp1
Gm8165
Mid2
Fzd5
Neurod1
Zfp608
Wee2
Tmco5
Zbtb8a
Nt5c2
Ina
Lats2
Taf1d
4931406C07Rik
Emb
Il31ra
Prkar2b
Cbx1
Uts2b
Sms
Coro2a
Zkscan1
Ccpg1os
Ccpg1
Ttc32
Rnase12
Rnase11
Myef2
Kdm4c
Pgk1
Zfp3
Cybb
Eml1
Sytl2
Ncoa3
Ntn1
Cbx5
Hmgxb4
Acbd5
Mup4
Psmc6
Qrfpr
Gnat2
Plekha1
Fezf2
Nrp1
Alkbh5
Hadh
Tenm2
Sec24b
Ackr1
Morf4l1b
Tjp2
Erbb4
Aqr
Gm14325
Dipk1c
Oser1
Angpt1
Ndst1
Peli3
Morc1
Xrcc6
Desi1
Mrps25
Atp6v0a1
Pgpep1l
Olfr1286
Adar
Timm9
2700049A03Rik
Rbm47
Arhgap28
Tnfrsf19
Ror1
Shroom4
Btla
Hacd4
Rps19
Ism1
St18
Vmn2r24
Olfr492
Csta3
Lrp2bp
Lrmp
Chd7
Zfp931
Klhl29
Gm14326
Prpf40a
Arl6ip6
Knl1
Bdnf
Id3
Lama2
Bcas1
Zbtb18
Pgm5
Dennd11
Cdh12
Neil1
Cilp
Gm6710
Gm14391
Kdm2b
Col6a6
Zfp516
Nol4
Gm14410
Barhl1
Prkab1
Atg4c
Tmem37
Tmeff1
Usp25
Mro
Cipc
Edar
Accsl
Sspn
1600014C23Rik
Fbxo7
Lix1
Etl4
Rgs8
Slc17a8
Enc1
Kcnh2
Zfp984
Kcnh8
2410004B18Rik
Znrf4
Foxp1
Acadl
Cfap36
Spx
Dock10
Lef1
Cdh20
4930474N05Rik
4930503B20Rik
Fgd4
Sox2
Tyr
Ccn2
Diaph2
Sctr
Mad1l1
Olfr1046
Trp53bp1
Arhgef33
Myt1l
Optn
Mbtps2
Cyyr1
2410141K09Rik
Tmem30c
Crybg3
Tbc1d23
Nptx2
Rnase4
Ang
Zfp382
Dusp23
2210418O10Rik
Ms4a14
Fam171b
Zeb2
Pxn
Slc16a3
Myo1b
Scml4
Cfap54
Piwil1
Ankrd36
F2rl1
Ppp3r1
C2cd5
Rex2
Pde4b
Slc10a1
Lrig3
Lrrc4c
Cyp2j12
2510009E07Rik
Ntn4
Abhd6
Pdgfc
Zfp987
Ppp1r15b
Ankrd50
Spp2
Amacr
Ppp2r2b
Col11a1
Hmga1b
Hmga1
Pdlim1
Cd36
Pax6
Nt5e
Gnai1
Olfr60
Slc7a7
Zfp260
Gja1
Tcf7l1
Pcdh12
Hoxa1
Lsm14a
Mest
Actn4
Spidr
Gm11837
Ssu72
Kctd9
Cdca2
Zfp960
Zfp534
Eif2d
Lmo1
Ppm1e
Gm51425
Csf2ra
Trex1
Shisa5
Ogn
Olfr806
Gm9595
Gm29797
Creb3l1
Ccser2
Plekhf2
Pla2g2e
Gm13030
Taf12
Zfp979
Gdf5
Zbtb45
Arhgap36
Oasl1
Taar7b
Cdk19
Tagln3
Ldlr
Fgfr2
Nkx2-4
Raet1d
Ptpn12
Lig3
Ssr2
Kat2a
Hspb9
Dll1
Trim2
Lingo3
Rps10
Ddx19b
Cacna1c
Ext1
Atp8a1
Gfra3
Abca4
Ubiad1
Mtor
Kcnj16
Wbp2nl
Fam25c
Mfng
Megf9
Eya1
Otx2
Colec12
Engase
Akr1b3
Cldn3
Mnx1
Arxes2
Lrpap1
Ndufaf4
Ncoa4
Sall4
Ccdc83
Zfp980
Pipox
Gtdc1
Apbb2
Kcnv2
Oacyl
Fbxo31
Tm4sf4
Mbp
Tmc5
Gm5165
Olfr812
Nr6a1
Prkaa1
Uqcc3
Lbhd1
Lipm
Lars
Zfp991
Slc19a3
Zfp978
Laptm4b
Tle3
Synpr
Prtg
Mrvi1
Rln3
Il27ra
Zfp280b
Katnal2
Foxd3
Rab27a
Nfkbil1
Atp6v1g2
Phax
Aldh7a1
Gpx1
Klhdc4
Ucma
Dnmt3a
Lrrtm4
AI429214
Daam1
Thap4
Gpr139
Dennd4a
Dchs2
Gm10710
Kdm3b
Tac4
Zdhhc16
Exosc1
Kifc3
Tmem107
Usp44
Cnpy1
Slc9a9
Trim24
Reep3
Olfr1240
Lct
Olfr98
Ttc33
Rab28
D630039A03Rik
Zfp462
Phc2
Arap2
Rbfox2
Atad2b
Pkdcc
Mpzl1
Fgf1
Otud1
Myb
St6gal1
Arhgef18
Npffr2
1700034J05Rik
Raph1
Lamc1
Sulf2
Hesx1
Rpia
Sypl2
Lhx9
Plcxd1
Cotl1
Skil
Zfp985
Rnf38
Rdh11
Adam12
Golgb1
Fam43a
Fzd8
Tcf12
Trim50
Nfkb1
Mbnl2
Zfp981
Kat2b
Trub1
Zfp217
D7Ertd443e
Apbb1
Zfp97
Inip
Tbc1d9
Erich3
Acaa2
Gpr141
Pde11a
Slc48a1
Caly
Lin28a
Vmn2r12
Mrpl22
Gemin5
Ccng1
Sugct
Mplkip
Zfp91
Lpxn
Cldn14
Gm4981
Dux
Eef1akmt1
Tnks2
Drg1
Anapc15
Fev
Tspan15
Olfr1282
Mov10l1
Mlc1
Zfp971
Txlng
Kctd16
Zmynd11
Vps54
Sfi1
Ptpn14
Nup93
Arid3b
Cdkn2d
Clcn3
Npepps
Klf6
Insyn2b
Stk38
Usp15
Gm9508
Dpp10
Ankrd6
Prkcq
Nuak1
Spertl
Zfp990
Olfr150
4930447A16Rik
Dscaml1
Ptprz1
Ucn
Lima1
Lama1
Errfi1
Scfd2
Fip1l1
Arhgap33
Ifitm2
Gm3667
Myl12a
Myl12b
Slc22a23
Smim13
BC048507
Rfx4
Secisbp2l
Pstpip2
Tfeb
Rsph4a
Tmem125
Copz1
Vmn2r102
Kdm1a
Impdh2
Map7
Clcn4
Zc3h4
Olfr435
Tfe3
Crybg1
Vax1
Raet1e
Raet1c
Raet1b
Kitl
Mical3
Ldb1
Dnaic2
Pdpr
Sv2a
Rps12
Olfr1312
Gm38396
Zranb1
Krt222
Tyro3
Slc10a5
Phlpp1
Bcas2
Tbr1
Rag1
Alpk3
Adgrg7
Lmo7
Olfr986
Klhl32
Osbpl1a
Smad2
a
Zc3h12c
Ttc23
Foxd4
Lhx5
Ublcp1
Npas1
Atp5g2
Cul2
Sulf1
Spice1
Serac1
Gtf2h5
Ilvbl
Zfyve26
Rad51b
Cdh3
Dpys
Grpel1
Tnip3
Riok3
Ptpn13
Cyth3
Col12a1
Pdha1
Nkx3-1
Klhl2
Sftpd
Plekha7
Irx4
Rnft1
Nfe2l3
Mrpl45
4930583I09Rik
Nr4a2
Txndc2
Bms1
4930550C14Rik
Sort1
Etv1
Sirt4
Lrrc10b
Slc25a19
Fam32a
Gpr137
Bad
Dpf2
Jmjd1c
Taf5
Ifnb1
Tamm41
Ppp3ca
Ehmt2
Ranbp9
Osgin2
Ddx58
Oxct1
Gpc6
Rnf8
Chmp6
L3hypdh
Jkamp
Plekhm1
Zfp212
Cadm3
Scfd1
Uhrf1bp1
Eef2
Dapk3
Lefty2
Plxdc2
1700024G13Rik
Cd59a
Fam222b
Krt25
Gbx1
Gas2
Fancf
Msi1
Il18rap
Nacc2
Hdac9
Gm14305
Ehf
Sapcd1
Map6
Numb
Gypa
Fabp7
H3c11
H2bc22
H2ac22
Tex2
Rftn2
Ptch1
Ttc30b
Rnf2
Maml2
Bmf
Bcar3
Trappc6b
Pcbp4
Abhd14b
H2-T23
Selenos
Slc46a3
Pls1
Col1a2
Stk33
Rbm8a
Efna5
Nlrp9b
Man1a2
Tpd52l1
Bambi
Celf4
Otol1
Pclo
Rdm1
Exosc9
Zbtb11
Acpp
Pak3
Krt90
Rab31
Gm4861
Nfatc4
Gm38510
Zfp715
Ddx6
Tcp11l1
Pin1rt1
Ahi1
Phip
Phactr1
Bhlhe22
Hapln1
Por
Myoz1
Poglut3
Akap9
Sh3glb2
Miga2
Zmym2
Nsmaf
Speer4e
Saxo2
Efl1
Pkmyt1
Itgbl1
Prepl
Camkmt
Pml
Slc25a25
Fbxw2
Siah1a
Vrk1
Zfp869
Tmem209
Ssmem1
Tbx3
Rcn1
Tex37
Batf
Zzef1
Cyb5d2
Srpk1
Slc7a11
Mfap4
Edem1
Mterf1a
Ooep
Chrm1
Tcerg1
Zfp988
Thsd7a
Nkx3-2
Gm3448
Gm3417
Gm3435
G6pc2
Spata18
Hnrnpa3
Vav3
Neurod4
Runx1t1
Vnn1
Armh4
Spns1
Bod1l
1110032F04Rik
Lrrn3
Ankrd35
Hmgn5
Ptgfrn
Il17d
St3gal5
Vmn1r30
Gspt1
Arhgef28
Tmem242
Pik3r4
Ppp1r2
Mthfd1
Acsbg3
Acsbg2
Leng8
Coa6
Rgmb
Trarg1
Bhlha9
Ipo11
Eif4enif1
Rce1
Arid1a
Phox2b
Atp2b2
Commd4
Gpr1
Map4
Ruvbl1
Tm2d2
Ifnar1
Gm10406
Trdn
Gsx2
Clvs2
Armc3
Tesk2
C130073F10Rik
Mettl9
Fhit
Cep112
Gm7592
Baz2b
Gapvd1
Dlc1
Chmp1b
Zbtb2
Prph
Rxrg
Galk1
Gm1979
Thg1l
Magi2
Slc6a5
Prss8
Med24
Fmc1
Bend3
Cradd
Tuba1b
Golm2
Abca8b
Ascl1
Klhl24
Rab5b
Sema5b
Sema6d
St3gal1
Snca
Gm5820
Pcdh1
Angpt2
Tshz2
Cdh23
Ccr6
Chst7
Dnajb8
Lrrn2
Vmn2r2
Ttll3
Onecut2
Zfp703
Ccdc107
Olfml1
Rtn1
Grm4
Enox1
Rab3gap1
Arid1b
Fndc3b
Ppia
Unc5c
Xylt2
Aen
Spaca7
Ubqln4
Lamtor2
Gabrg2
Olfr107
Wwox
Galr3
Olfr846
Gm21119
Mylk
Tmem178b
Abi2
Gm7244
Slc10a4
Esr1
Pla2g2d
Tshr
Wdcp
Fkbp1b
Mamdc2
Nutm1
Nop10
Pde7b
Prkab2
Tmcc2
Gpm6b
Hopx
Smco4
Taar9
Pxylp1
Zfhx4
Gm15319
Onecut3
Slc25a35
Rangrf
Epn2
Arap1
Tbpl1
Ust
Ctbp2
Dct
Asf1b
Zcchc24
Zfp663
Psap
4930467E23Rik
Abracl
Ppp1r17
Mrap
Adtrp
Vmn2r82
Ebf3
Thrb
Cacng1
Myt1
Fech
Tent5c
Chrna4
Myh3
Cdh24
Filip1
Fbln1
Zfp707
Aadacl2fm1
Ifna13
Ank3
Cdca7
Atp8b4
Serpinb2
Arid4a
Gcgr
Tent5a
Aff1
Mrps33
Skap1
Slc39a10
Erg
Olfr108
Sem1
Tcf15
Slc35f3
Baz1a
Ttc30a2
Mobp
Hacd3
Ptpro
Ccnq
Gramd1b
Pop5
Toporsl
Pcbd2
Cfap43
Cibar2
Arhgef2
Fbxo32
Fam13b
Vmn2r5
Irx5
Ebf2
Dip2b
Bnc2
Phactr3
Rorb
Cyth1
Nrep
Lpar6
Sh2d4a
Trafd1
Rabepk
Muc15
Synpo
Ubr5
Mgat4a
Smug1
Homer2
Tti2
Mical2
Micu2
Myo1e
Pitpnm1
Fgf15
Olfr62
Foxa2
Gcn1
Lgals12
Rcor3
Nt5c3b
Klhl10
Atp1a1
Scg2
Ppfia4
Cyp7a1
Negr1
Wdr17
Cyp2b10
Cep350
Snw1
Hmcn1
Stk32a
Ubap1l
Add1
Upf3a
Atxn7l1
Iapp
Iqschfp
Iqcj
Zfp423
Mrps28
Gng3
Bscl2
Vtcn1
Rexo1
Sacs
Dstn
Myo10
Ptms
Cd200
Slc16a7