ChIP-Atlas: Target genes

Potential target genes for Lhx3

Query protein: Lhx3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1706959 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Lhx3's Target genes

◢ Lhx3: Average

◢ SRX1706941: mESCs, differentiated

◢ SRX1706942: mESCs, differentiated

◢ SRX1706944: mESCs, differentiated

◢ SRX1706945: mESCs, differentiated

◢ SRX1706946: mESCs, differentiated

◢ SRX1706947: mESCs, differentiated

◢ SRX1706952: mESCs, differentiated

◢ SRX1706953: mESCs, differentiated

◢ SRX1706958: mESCs, differentiated

◣ SRX1706959: mESCs, differentiated

◢ SRX1706965: mESCs, differentiated

◢ SRX1706966: mESCs, differentiated

◢ SRX1706967: mESCs, differentiated

◢ SRX1706968: mESCs, differentiated

◢ SRX1706974: mESCs, differentiated

◢ SRX1706975: mESCs, differentiated

◢ SRX1706976: mESCs, differentiated

◢ SRX2388060: mESCs, differentiated

◢ SRX2388063: mESCs, differentiated

◢ SRX2388064: mESCs, differentiated

◢ SRX2388067: mESCs, differentiated

◢ SRX2388068: mESCs, differentiated

◢ SRX2388069: mESCs, differentiated

◢ SRX2388070: mESCs, differentiated

◢ SRX2388071: mESCs, differentiated

◢ SRX2388072: mESCs, differentiated

◢ SRX2388074: mESCs, differentiated

◢ Lhx3: STRING

Nfe2
Cars
Snx18
Kank1
Zfp879
Ubxn10
Pla2g2c
Frmd4a
Nhsl1
Gm4791
Rab38
Mcf2
Sostdc1
Edar
Sipa1l1
Mpi
Nrf1
Sepsecs
Olfr492
Kcng3
Pakap
Arhgap33
Bsx
Zcrb1
Pphln1
Coro2a
Prkab1
Krt8
Pgk1
Akap17b
Hoxc10
Nptx2
Zfp516
Lmo3
Bin2
Atg4c
Zfp608
Tagln3
Slc25a40
Dbf4
Ndufaf4
Lrmp
Lmo4
Pmfbp1
Taf1d
4931406C07Rik
Enc1
Wee2
Tm4sf4
Kdm2b
Irgm2
Nrp1
1600014C23Rik
Pgpep1l
Tspan15
Ntn1
Gdf5
Fgf1
Tmeff1
Skap1
Pxn
Mpp4
Sytl2
Esrrb
Psmc6
Pkdcc
Zkscan1
Cldn3
Gja5
Sash1
Rnase12
Rnase11
Lrrc52
Rasl11a
Gnat2
Slc7a7
Dnajb8
Nnt
Spp2
Hmga1b
Hmga1
Cybb
Rbm27
Fezf2
Neurod1
Id3
Grm4
Dennd11
Pex5l
Morc1
Ndst1
Laptm4b
Plekhh3
Cntnap1
Ccr10
Slc17a8
Cfap36
Myt1l
Tmco5
Arhgap28
Ccpg1os
Ccpg1
Kdm4c
Hoxa1
Cilp
Rbm47
Lrrtm4
Zbtb8a
Abca4
Phc1
Znrf4
Mylk
Tmem30c
Pdlim3
Copz1
Aqr
Lef1
Alkbh5
Ypel1
Gm5820
Sctr
Mid2
Ankrd36
Pcdh12
Sema5b
Lmo1
Grpel1
Arhgef33
Cdk19
Tnfrsf19
Qrfpr
Btla
Peli3
Fam171b
Trex1
Shisa5
Emb
Nt5e
2410004B18Rik
Rgs8
AI429214
Plekha1
Nfkbil1
Atp6v1g2
Kcnn2
Fam43a
Nt5c2
Ina
Ext1
Acbd5
Amacr
Cfap54
Cdh23
Atp2b2
Foxp1
Taar9
Xrcc6
Desi1
Eml1
Angpt1
Gm5165
Zdhhc16
Exosc1
Ptpn12
Uts2b
Arxes2
Oser1
Col11a1
Lsm14a
Timm9
2700049A03Rik
Angpt2
Zfp715
Ddx19b
Cacna1c
Rab27a
Gpr139
Ackr1
Usp25
Cbx5
Smarcal1
Sms
Zfp3
Ptpro
Mad1l1
Lrrc4c
Sec24b
Kdm3b
Phc2
Gm4861
Pdlim1
Ror1
Mup4
Mnx1
Bdnf
Ubiad1
Mtor
Myef2
Sh2d4a
Lats2
Fndc3b
Dipk1c
Sp5
Creb3l1
Cdh12
Npffr2
Hopx
Zfp663
Srp19
Atp6v0a1
Rnase4
Ang
Trim2
Myoz1
Ptprz1
Raph1
St18
Dusp23
Ncoa4
Nol4
Zfp703
Gm14325
Atp8a1
Cyp2j12
Shroom4
Iapp
Sv2a
Morf4l1b
Gm14410
Tbr1
Fzd5
Lix1
St3gal1
Smug1
Gm51425
Prkar2b
Dpp10
Hmgxb4
Tdrd3
Ntn4
Lama1
Aen
Snw1
Galr3
Zfp960
Kat2a
Hspb9
Bambi
Dennd4a
Acadl
Kif15
1110059G10Rik
Kctd9
Cdca2
Abcc12
Optn
Myo1b
Zfp260
Col6a6
Ttc32
Knl1
Lingo3
Ankrd50
Kifc3
Atp5g2
Zfp931
Adar
Gas2
Fancf
Ogn
Mest
Chmp6
Cdh20
Ptpn14
Jup
Trhde
Col3a1
Ppp3ca
Zeb2
Gm9508
Ppia
Mpzl1
Etl4
Barhl1
Olfr107
Crybg3
Chrna4
Hadh
Arhgef18
Cipc
Zfp462
Cldn34d
Bcas2
Pax6
Taar7b
Tcf7l1
Dock10
Accsl
Neil1
Mrvi1
Tcaf1
Zic4
Olfr60
Uqcc3
Lbhd1
Agap3
Lgals12
Psap
Foxe1
Akr1b3
Mrps25
Tjp2
Gm8165
Tbc1d23
Armh4
Rce1
Slc9b2
Cul2
Arhgef2
Prkaa1
F2rl1
Slc16a7
Slc9a9
Trp53bp1
Taf12
Slc10a1
Pipox
Daam1
Olfml1
Mgat4a
Olfr1286
Msi1
Rps19
Optc
Atp1a1
Pop5
Otop3
Lrpap1
Dll1
Lefty2
Lrrn2
Lrrc10b
Abi2
Pde7b
Prpf40a
Arl6ip6
Zfp97
Lamc3
Eif2d
Lama2
Dpf2
Zic3
Plekhm1
Eda
Gpm6b
Apbb2
Fgd4
Tctex1d1
Mamdc2
Trafd1
Gm4907
Nup93
Tenm2
Arid1a
Mfng
2510009E07Rik
4930503B20Rik
Spx
Ucma
Celf2
Lamc1
Cyth1
Rln3
Il27ra
Mcub
Chmp1b
Arhgap36
Zfhx4
Ssu72
Hacd4
Ppp1r17
Kdm1a
Adck1
Gm17026
Acaa2
Mlxip
Inip
Pcdh1
Wbp2nl
Lpar6
Galc
Ldlr
Ryr3
Chd7
Dct
Gm6710
Gm14391
Crx
Slc25a35
Rangrf
Spidr
Bcar3
Apbb1
Trub1
Pxylp1
Slc25a25
Gspt1
Lpar1
Zbtb18
Tent5a
Rnase9
Sulf2
Tac4
Ppp3r1
Pear1
Zfp217
Txndc2
Zfp869
Zfyve26
Rad51b
Krt222
Riok3
Tmem37
Raet1d
Ndufa4l2
Csta3
Sema6d
Tmem107
Serac1
Gtf2h5
Nfatc4
Pitpnm1
Cldn10
Rtn1
BC048507
Bcas1
Epn2
Fam222b
H3c11
H2bc22
H2ac22
H1f5
Zcchc24
Fgf15
Mageh1
Eef1akmt1
4930474N05Rik
Spock3
Palmd
Kcnh2
Slc19a3
Gpbp1
Cga
Kcnj16
Eya1
Tmbim1
Ppp1r2
Foxd3
Lrig3
Secisbp2l
Usp15
Fbxo31
Cyyr1
Piwil1
Cnpy1
Slc10a4
Gnai1
Vax1
Cd200
Otud1
Mrpl45
Synpo
B3galt5
Rs1
Lrp2bp
Rps12
Pgm5
Tle3
Cotl1
Haao
Gm29797
Rdh11
Fbln1
Hspa12a
Eno4
Zfp707
Mrps33
Mbtps2
Rwdd1
Ilvbl
Gja1
Prkab2
Tbc1d9
Hmx1
Otx2
Gfra3
Mcur1
Cdh3
Klhl29
Bhlhe22
Tmc5
Acpp
Olfr1046
Nr6a1
Efna5
Vangl2
Wdcp
Fkbp1b
D7Ertd443e
Ankrd6
Grip2
Vmn2r2
Scml4
Mro
Kitl
Ubr5
Pcdhgc5
Pcdhgc4
Gm14326
Cacnb2
Lig3
Gm52429
Gm38396
Tmcc2
Htr3a
Asf1b
Ehmt2
Pcbp4
Abhd14b
Zfp473
Vrk3
Rexo1
Arap1
Zfp939
C2cd5
Ublcp1
Dnaic2
Irx4
Pitx2
Cyp7a1
2210418O10Rik
Lap3
Hmcn1
Lgr4
Asic1
Rorb
Gm6712
Celf4
Mrpl22
Gemin5
Arid3b
Ttc22
Gm17124
Wdr89
L3hypdh
Jkamp
Klf6
Fzd10
Fbxo7
Gramd1b
Megf9
Arhgef26
Tspan3
Radil
Gm11837
Sh3glb2
Miga2
Alpk3
Ppargc1b
Ccr6
Sorl1
Cbx1
Siah1a
Olfr435
Ifnb1
Nrep
Ints4
Rictor
Nfkb1
Grap2
Phax
Aldh7a1
Rbbp7
Tnip3
Has2
Tex2
Cxxc5
Myh3
Erbb4
1700024G13Rik
Enox1
Irx5
Cass4
Smco4
Cdca7
Gm21119
4930467E23Rik
Fam13b
Traf3ip1
Eml2
Sec61g
Gsc
Hoxb2
Snca
Negr1
Sox2
Krt23
Clps
Slc39a10
Hacd3
Gnas
Otx1
Scg2
Tmem171
Pdgfc
1700034J05Rik
Foxb1
Arid4a
Oacyl
Pik3ip1
Arid5b
Reep3
Gna14
Tmem209
Ssmem1
Lima1
Impdh2
Nt5c3b
Klhl10
Gabrb2
Il31ra
Runx2
Ccnq
Tfe3
Triqk
Sall4
Jagn1
Nr0b2
Fyco1
Vmn2r12
Kmt2c
Ppp2r2b
Glb1l2
Ypel3
Tbx6
Usp44
Elavl2
Fermt2
Nxph4
Ube2ql1
Hesx1
Armc3
Zfp382
Ucn
Tef
Sox5
Acsm1
Cdh24
Prtg
Fzd8
Aqp3
Abr
D630039A03Rik
Gm15319
H3c3
H3c2
H2bc3
H2ac4
Eif4e3
Prkd1
Epb41l3
Sost
Tnks2
Trim24
Adamts10
Adgrg7
Fbxo11
Zfp212
Cacng1
Rbfox2
Shc4
Taar6
Mthfd1
Bcor
Ttll3
Aff1
Cyp2b10
Prop1
Tfeb
Crybb3
Prkcq
Dclk1
Tcerg1
Mrps28
Olfr806
Drd2
Stx12
Rxrg
Sulf1
Zbtb2
Rfx4
Ncoa3
Rnf38
Kcnh8
Plekhf2
Lsmem2
Gfi1
Myt1
Smndc1
Rraga
Cd300lg
Smad5
Pias1
Tuba1b
Agtrap
Kpna1
Cibar2
Myb
Crybg1
Lingo2
Stk32a
Skor1
Nck2
Slc35f3
Zfp987
Mbp
Slc25a4
Tbx3
Zfp182
Tma7
Ccdc51
Gm3173
Add3
Caly
Pdha1
Spaca7
H2al1j
Cry1
Pdpr
Ralgds
Upf3a
Prps1
Skil
Nkx3-1
Atg7
Car9
Arhgef39
Krt90
Dmrtb1
Lpar4
Arap2
Ccdc88c
Gng3
Bscl2
Fabp7
Mical3
Ergic3
6430550D23Rik
Pdcl3
Zfp991
Neurod4
Lmo7
Fam76b
Cep57
Bmp7
Engase
Tbpl1
a
Serpinb2
Slc8b1
Plbd2
Spaca9
Ak8
Npas1
Ptms
Lag3
Ism1
Slc44a3
Ccdc107
Zmat4
Ehbp1
Plekha7
Epha1
Vmn2r24
Plekhg2
Mov10l1
Mlc1
Lipg
Slc20a1
Gcn1
Acat3
Otol1
Osgin2
Gipc2
Nuak1
Nav1
Myl12a
Myl12b
Nkx2-4
Trarg1
Bhlha9
Gpatch1
Kcnv2
Zc3h12c
Drg1
Poglut3
Xylt2
Jmjd1c
Agpat3
Fnbp1
Chodl
Fech
Kctd15
Kifc1
Peli2
Pax8
Gpr25
Vnn1
C1ql1
Acvr2a
Olfr986
Gm20346
Ttc30b
Colec12
Zfp91
Lpxn
Sp9
Por
Gm11100
Tra2a
Zadh2
Tshz1
Ninj1
Olfr108
Cnnm2
Bcl2l1
Rsph4a
Rere
Dcun1d4
Bloc1s1
Gse1
Arfgap2
Dact2
Erg
Dstn
Vgll1
Zfp971
Agpat5
Ehf
CK137956
Bnc2
H3c4
H2bc8
H2bc7
H2ac8
H2ac7
Ywhab
Lhx5
Selenos
Wnt5b
Add1
Dusp4
Zfp945
Nip7
Cog8
Phlpp1
Sugct
Mplkip
Abhd6
H2-T23
Polr2m
Cypt3
Txlng
Shroom3
Neurog2
Gtdc1
Col4a2
Coro6
Zbtb11
Zfp995
Ccn6
Rbms1
Runx1
Rab5b
Dll4
Olfr150
Zfp534
Unc13b
Gas1
Rcor1
Syne3
Sh2d5
Slc37a4
Pak1
Ankrd10
Trappc6a
Bloc1s3
Rora
Tamm41
Map7
Akap9
Ptgr2
Plcxd1
Zfp317
Tshz2
Trio
Rgmb
Tbc1d5
Nkain3
Greb1
Grsf1
Rps10
Stk38
Olfr1282
Zbtb24
Lhx9
Gm3696
Erich3
Wnt2
Bms1
Shld2
Glud1
Cd59a
Galnt5
Tyr
Tmem273
Gsx2
Gm14322
Nat8
Tmem178b
Stk33
Pla2g2e
Gm13030
Dync1li1
Ppm1a
Ajap1
Slc12a6
Zfp979
Rhpn2
Myog
Dhx32
Scd3
Cep112
Zfp985
Itprid1
Olfr812
Ret
Pcbd2
Psd3
1110032F04Rik
Tpcn2
Rps6ka3
Tcf15
Tex37
Col12a1
Ppm1e
Nbeal2
Ccdc12
Ifitm2
4930550C14Rik
Chst7
Insyn2b
Armc12
Mettl9
Lipm
Zfpm1
Wdr63
Tle1
Krt25
Trappc4
Rps25
Unc5b
Raet1e
Raet1c
Raet1b
Tcl1b3
Lct
Fbxo28
Tex36
Gm3411
Mansc1
Atp2c1
Pak2
Rnft1
Leng8
Ccn2
Ovca2
Dusp5
Prkacb
Zfp219
Cdh10
Alg8
Pcdhb12
Tti2
Npc1
Stk11ip
Megf10
Fam124a
2610042L04Rik
Trdn