ChIP-Atlas: Target genes

Potential target genes for Lhx3

Query protein: Lhx3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2388064 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Lhx3's Target genes

◢ Lhx3: Average

◢ SRX1706941: mESCs, differentiated

◢ SRX1706942: mESCs, differentiated

◢ SRX1706944: mESCs, differentiated

◢ SRX1706945: mESCs, differentiated

◢ SRX1706946: mESCs, differentiated

◢ SRX1706947: mESCs, differentiated

◢ SRX1706952: mESCs, differentiated

◢ SRX1706953: mESCs, differentiated

◢ SRX1706958: mESCs, differentiated

◢ SRX1706959: mESCs, differentiated

◢ SRX1706965: mESCs, differentiated

◢ SRX1706966: mESCs, differentiated

◢ SRX1706967: mESCs, differentiated

◢ SRX1706968: mESCs, differentiated

◢ SRX1706974: mESCs, differentiated

◢ SRX1706975: mESCs, differentiated

◢ SRX1706976: mESCs, differentiated

◢ SRX2388060: mESCs, differentiated

◢ SRX2388063: mESCs, differentiated

◣ SRX2388064: mESCs, differentiated

◢ SRX2388067: mESCs, differentiated

◢ SRX2388068: mESCs, differentiated

◢ SRX2388069: mESCs, differentiated

◢ SRX2388070: mESCs, differentiated

◢ SRX2388071: mESCs, differentiated

◢ SRX2388072: mESCs, differentiated

◢ SRX2388074: mESCs, differentiated

◢ Lhx3: STRING

Kank1
Nfe2
Rab38
Cars
Snx18
Pgk1
Atg4c
Zfp879
Ubxn10
Pla2g2c
Mcf2
Cldn34d
Ascl1
Pmfbp1
Spp2
Tnfrsf19
Lrrc52
Bin2
Nptx2
Rnase12
Rnase11
Cfap36
Kcng3
Sema5b
Sipa1l1
Nhsl1
Atp2b2
Lmo4
Nrp1
Sepsecs
Kdm4c
Onecut2
Gas2
Fancf
Mpi
Xylt2
Zfp516
Zfp703
Kpna1
Ptpn12
Col6a6
Hoxa1
Nt5c2
Ina
Edar
Cd59a
Ccr6
Lmo3
Mid2
Tshz2
Unc5c
Uts2b
Plekhh3
Cntnap1
Ccr10
Mpp4
Cdh12
Bambi
Peli3
St3gal1
Olfr107
Nnt
Cdk19
Mnx1
Abhd6
Ntn1
Ebf3
Tshr
Nutm1
Nop10
Ypel1
Slc17a8
Onecut3
Chmp1b
Krt8
Chst7
Neil1
Gm4791
Rasl11a
Sem1
Neurod1
4930503B20Rik
Sema6d
Nrf1
Lrmp
Hoxc10
Dock10
Htr3a
Snca
Il31ra
Lrrtm4
Tspan15
Sostdc1
Copz1
Lmo1
Akap17b
Olfr806
1600014C23Rik
Dpf2
Pakap
Prkab1
Bsx
Irgm2
Zfp608
Foxa2
Frmd4a
Gpr139
Ndufaf4
2410004B18Rik
Raet1d
Cdh23
Sytl2
Pla2g2d
Bcas2
Aff1
Rab3gap1
Rtn1
Gm21119
Gm15319
Serac1
Gtf2h5
Raet1e
Raet1c
Raet1b
Homer2
Ccdc107
Olfr846
Arxes2
Rbm27
Sspn
Etl4
Cyth3
Vmn2r82
Taf1d
4931406C07Rik
Vtcn1
Pcdh1
Ebf2
Hacd4
Grpel1
4930467E23Rik
Hopx
Phactr3
Psmc6
Wdcp
Fkbp1b
Ccpg1os
Ccpg1
Angpt2
Olfr108
Gm5820
Lrrn2
Cbx5
Abi2
Zcrb1
Pphln1
Morf4l1b
L3hypdh
Jkamp
Kcnn2
Ctbp2
Cog3
Mup4
Fam43a
Tbc1d23
Olfr62
Taar9
Shroom4
Cpne3
Aadacl2fm1
Cep350
Hesx1
Zeb2
St18
Acbd5
Pgrmc2
Ttc32
Esr1
Tmeff1
AI429214
Laptm4b
Mamdc2
Usp25
Cybb
Sulf2
Kctd9
Cdca2
Sall4
Fam171b
Lmx1b
Apbb2
Nr4a2
Thrb
Tm4sf4
Lef1
Angpt1
Foxp1
Kcnh8
Stk33
Muc15
Emb
Sash1
Enox1
Cacng1
Cfap54
Slc6a5
Timm9
2700049A03Rik
Abca4
Arid1b
Vmn2r102
Arid4a
Cdh24
Myl12a
Alkbh5
Ror1
Ddx19b
Kdm2b
Slc10a4
Psap
Daam1
Ilvbl
Ubqln4
Lamtor2
Spaca7
Tnks2
Rbm47
Qrfpr
Mobp
Coro2a
Csf2ra
Slc7a7
Dennd4a
Lats2
Gm11437
Esrrb
Arhgef18
Gnat2
Hacd3
Rcor3
Tmco5
Creb3l1
Rnf43
2510009E07Rik
Kifc3
Tagln3
Pxn
Hmga1b
Hmga1
Lama2
Rpf1
Ndst1
Vmn2r2
Grm4
Vmn2r24
Itgb2
Gm12253
Tjp2
Fgd4
Spx
Slc10a1
Myo1e
Raph1
Fgfr2
Hadh
Eef1akmt1
Mroh1
Rfx4
Atp6v0a1
Abracl
Gcgr
Fzd8
Gnai3
Gm4861
Phc2
Wwox
Phc1
Slc25a35
Rangrf
Sec61g
Anxa2
Zkscan1
Sh3glb2
Miga2
Ccdc171
B4galt5
Cenpv
Pgpep1l
Eml1
Baz2b
Ifna13
Fkbp5
Tyr
Ext1
Smco4
Tent5c
Rragd
Sptlc2
Tmem47
Oit1
Ubr5
Grik3
Dipk1c
Nfe2l3
Klhl29
Baz1a
Bnc2
Pkdcc
Id3
Ank2
Pag1
Fndc3b
F2rl1
Hapln1
Neurog2
Nol4
Ldlr
Cldn3
Ppia
Mylk
Tmcc2
Pdlim3
Celf4
Zfp985
Lix1
Gcn1
Colec12
Olfr1286
Tmem30c
Kat2a
Hspb9
Olfml1
Dchs2
Tmem107
Lims1
Gm10710
Rps19
Filip1
Slc20a1
Tamm41
Zfp534
Slc25a40
Dbf4
Gapvd1
Trub1
Lipm
Mbnl1
Lrrc4c
Cyyr1
Knl1
Acadl
Stk32a
Pclo
Arhgap36
Ptpro
Taf12
Asf1b
Lsm1
Bag4
Tbpl1
Zcchc24
Fezf2
Zfp3
Atp5g2
Vmn2r5
Zfhx4
Arid3b
Adat1
Zfp451
Prmt2
Dnajb8
Btla
Gabrg2
Oasl1
Arap1
Erich3
Ranbp9
Cdh20
Zfp991
Ppp6r3
Tcf7
Tent5a
Optn
Tmem209
Ssmem1
Rab27a
Pdia5
Cep112
Insyn2b
Myt1l
Hmgxb4
Gm14325
Gpr137
Bad
Kcnk2
Lpar6
Sfi1
Gdf5
Ankrd36
Efna5
Zfp979
Pcdh12
Gja1
Sgo2a
Fam13b
Mthfd2
Enc1
Tnip3
Shroom3
Ubiad1
Mtor
Fbxo32
Skil
Myo10
Col3a1
Gcfc2
Lsm14a
Ifnb1
Olfr60
Mbtps2
Fap
Agtr2
Arhgef26
Pak3
Porcn
Rnase4
Ang
Gja5
Galr3
Mbp
Zfp980
Add1
a
Kcnj16
Aebp2
Hmcn1
Kifc1
Zbtb11
Snap25
Churc1
Zfp641
Zbtb8a
Prkcq
Cbx1
Zfp984
Lamc1
Taar6
Hey2
Kcnt2
Tmem178b
Fzd5
Adtrp
Lig3
Cyp7a1
Zfp217
Zbtb18
Ptprz1
Snw1
Dpp10
Stk38
Chd7
Cldn14
Dusp23
Mest
Tbr1
D1Pas1
Prkaa1
Rps10
Sox5
Mrgprd
Zfp91
Lpxn
Irx5
Pias1
Prtg
Txlng
Zfp473
Vrk3
Lgr5
Zranb1
Map4
Ptpn9
Trex1
Shisa5
Zfp931
Ppp1r2
Clcn4
Olfr1046
Cnpy1
Slc39a10
Ccng1
Nol4l
Vax1
Lipg
Zfp988
Gm4981
Actn4
Zfp763
Sms
Rorb
Otx2
Pkmyt1
Sult6b2
Zfp715
Col11a1
Armc3
Lrrc57
Haus2
Mrpl48
Ddx6
Tsc22d1
Thsd7a
Pou5f1
Arsi
Mrps25
Usp1
Csta3
Trafd1
Myo1b
Atxn1
Rdm1
Bmp5
Fbxw2
Cibar2
Peli2
Ccdc90b
Hexim1
Urgcp
Acp6
Morc1
Olfr492
Znrf4
Wee2
Dennd11
Ttll3
Arhgef33
Ntn4
Crybg3
Gm5165
Gm51425
Oser1
Fgf1
Aen
Rgs8
Arhgap33
Cyp2j12
Cilp
Trp53bp1
Gm14410
Olfr1282
Prkar2b
Foxd3
Myef2
Zfp960
Pdlim1
Dll1
Sctr
Gm7244
Nfkbil1
Atp6v1g2
Pde7b
Prkab2
Gpm6b
Bhlhe22
Xrcc6
Desi1
Pxylp1
Cipc
Ankrd50
Trim2
Zdhhc16
Exosc1
D7Ertd443e
Lima1
Epn2
Ssu72
Ust
Plekha1
Ackr1
Dct
Saxo2
Efl1
Atp8a1
Plekhm1
Nr6a1
Kdm3b
Zfp663
Gm8165
Taar7b
Vnn1
Apbb1
Fbxo31
Nfatc4
Ppp1r17
Bdnf
Mrap
Adar
Zfp869
Myt1
Fech
Rce1
Zfp260
Sec24b
Chrna4
Myh3
Kcnh2
Gm6710
Gm14391
Klf6
Ppp3ca
Sv2a
Msi1
Akr1b3
Fbln1
Pax6
Zfp707
Aqr
Scml4
Ank3
Cdca7
Tcf7l1
Prpf40a
Arl6ip6
Nup93
Atp8b4
Serpinb2
Otol1
Mro
Cul2
Mrps33
Skap1
Erg
Kdm1a
Tcf15
Cacna1c
Slc25a25
Slc35f3
Ttc30a2
Mad1l1
Bcas1
Usp44
Tle3
Rxrg
Nt5e
Ccnq
Mfng
Gramd1b
Gm38396
Pop5
Chmp6
Uqcc3
Lbhd1
Toporsl
Lingo3
Cotl1
Ogn
Pcbd2
Lama1
Arhgap28
Zfp97
Riok3
C2cd5
Cfap43
Arhgef2
Gm29797
Gm17026
Piwil1
Dip2b
Arid1a
Gnai1
Cyth1
Zfyve26
Rad51b
Nrep
Rln3
Il27ra
Gspt1
Usp15
Sh2d4a
Tenm2
Rabepk
Mrvi1
Mpzl1
Erbb4
Lhx5
Kitl
Ehmt2
Gm17124
Synpo
Jmjd1c
Inip
Mgat4a
Smug1
Ppp3r1
Impdh2
Dnaic2
Tti2
Mical2
Mical3
Micu2
Pitpnm1
Fgf15
Mrpl22
Gemin5
Gm14326
BC048507
Armh4
Lrig3
Gm11837
Lgals12
Gm9508
Neurod4
Nt5c3b
Klhl10
Atp1a1
Scg2
Fam222b
Ucma
Barhl1
Irx4
Ppfia4
Negr1
Wdr17
Cyp2b10
Ttc30b
Megf9
Ubap1l
Wbp2nl
Mrpl45
Tbc1d9
Upf3a
Atxn7l1
Slc9a9
2210418O10Rik
Iapp
Iqschfp
Iqcj
Zfp423
Mrps28
Gng3
Bscl2
Pcbp4
Abhd14b
Rexo1
Sacs
Dstn
Spidr
Ptms
Map7
Cd200
Slc16a7
Inpp4b
Myl1
Lrp2bp
Ankrd6
Eif2d
Bcar3
Krt222
Arap2
Ush2a
Npffr2
Cdc42ep3
Crx
Jagn1
Xrcc5
Txndc2
Zbtb2
Tmem202
Vmn2r4
Amacr
Zfp462
Tra2a
Ptpn14
Pde4b
Olfr1532-ps1
Scd3
Lefty2
4930474N05Rik
Lag3
Ppp2r2b
Accsl
Mageh1
Ablim1
Smad5
Commd4
Gnas
Rnase9
Chpt1
Gm6712
Zfp987
Zc3h12c
Osgin2
Lrrc10b
Sohlh2
B3galt5
Asb4
Radil
Ncoa4
Zmym2
Acat3
Sdk2
Elmo2
Olfr1240
Trim24
Tac4
Tmc5
Elavl2
Chn1
Prph
Xkr5
Alk
Acaa2
Pex5l
Sox2
Lingo2
Vangl2
Tcaf1
Fzd10
Jup
Arid5b
Rps12
Zic3
A1bg
Gm1113
Gpr141
Col12a1
Fam110b
Skor1
Bcor
Tmem30a
Gm3411
Acyp1
Gm3752
Cep120
Caly
Tyro3
Rdh11
Gm3173
Optc
Tmem37
Gfra3
Gm2956
Ttc23
Pgm5
Otud1
Bms1
St6gal1
Epb41l3
Exosc9
Gm4907
Prps1
Abr
Th
Il18rap
Hhip
H1f0
Gcat
Ndufa4l2
Rab5a
Vgll1
Cast
Srp19
Apobec2
Irs4
Rag1
Acvr2a
Zfp382
Drd2
Vkorc1l1
Lhx9
Otx1
Alpk3
Has2
Pipox
Pik3ap1
Meox1
Fbxo7
Asic1
Phlpp1
Smad2
Asic5
Por
Myb
Spns1
Kcnv2
Pop4
Plcd3
Acbd4
Spock3
Ints4
Clasp2
Tctex1d1
Grap2
Pdha1
Myl12b
Sh2d7
Smndc1
Gm3696
Smarcal1
Atp2c1
Otoa
Grwd1
Rraga
Gpr1
Nbdy
Plekhg2
Atp6v1e2
Unc13b
Nxph4
Zfpm1
Zfp385b
Zmat4
Fabp7
Hspa8
Gatad1
Cacng4
Lrpap1
Lrrc30
Gtdc1
2610042L04Rik
Trio
Ncoa3
Gm10406
Ttc34
Syt2
Errfi1
Rgmb
Phyh
Nkx3-2
Tmem273
Zc3h4
Trhde
Pcnx
Tdg
Drg1
Cldn10
Cga
Dusp4
Runx1t1
Rex2
Rbfox2
Tcf12
Spcs3
Gipc2
Creb5
H3c11
H2bc22
H2ac22
Sirt4
Frem1
Mov10l1
Mlc1
Synpr
Nemf
Fam76b
Cep57
Nmnat3
Tfeb
Crppa
Cd300lg
Ifitm2
Traf3ip1
H2-T23
Selenos
Hmx1
Acpp
Ccn2
Foxb1
Gm3739
Tcl1b3
Mlxip
Slc25a19
Cd36
Mcur1
Naa40
Ccdc88c
Cry1
Sulf1
Pak2
Rnf38
Mcub
Gmnn
Eya1
Acvr1c
Med25
Fuz
Arhgef28
Nars
Efnb2
Reep3
Rab5b
Thg1l
Sox4
Ermn
Abcd3
Ovca2
Tmem156
Pde11a
Dll4
Itprid1