ChIP-Atlas: Target genes

Potential target genes for Lhx3

Query protein: Lhx3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2388063 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Lhx3's Target genes

◢ Lhx3: Average

◢ SRX1706941: mESCs, differentiated

◢ SRX1706942: mESCs, differentiated

◢ SRX1706944: mESCs, differentiated

◢ SRX1706945: mESCs, differentiated

◢ SRX1706946: mESCs, differentiated

◢ SRX1706947: mESCs, differentiated

◢ SRX1706952: mESCs, differentiated

◢ SRX1706953: mESCs, differentiated

◢ SRX1706958: mESCs, differentiated

◢ SRX1706959: mESCs, differentiated

◢ SRX1706965: mESCs, differentiated

◢ SRX1706966: mESCs, differentiated

◢ SRX1706967: mESCs, differentiated

◢ SRX1706968: mESCs, differentiated

◢ SRX1706974: mESCs, differentiated

◢ SRX1706975: mESCs, differentiated

◢ SRX1706976: mESCs, differentiated

◢ SRX2388060: mESCs, differentiated

◣ SRX2388063: mESCs, differentiated

◢ SRX2388064: mESCs, differentiated

◢ SRX2388067: mESCs, differentiated

◢ SRX2388068: mESCs, differentiated

◢ SRX2388069: mESCs, differentiated

◢ SRX2388070: mESCs, differentiated

◢ SRX2388071: mESCs, differentiated

◢ SRX2388072: mESCs, differentiated

◢ SRX2388074: mESCs, differentiated

◢ Lhx3: STRING

Kank1
Rab38
Nfe2
Cars
Atg4c
Snx18
Mcf2
Nhsl1
Cldn34d
Ascl1
Pmfbp1
Ubxn10
Pla2g2c
Sepsecs
Rnase12
Rnase11
Nrp1
Lrrc52
Kcng3
Zfp879
Pgk1
Bin2
Tnfrsf19
Nptx2
Spp2
Edar
Onecut2
Zfp703
Kpna1
Uts2b
Abhd6
Ptpn12
Kdm4c
Sipa1l1
Irgm2
Hoxa1
Mpi
Sema5b
Gm4791
Col6a6
Nt5c2
Ina
Plekhh3
Cntnap1
Ccr10
Lmo3
Lmo4
Htr3a
Lrrtm4
Ntn1
Tshz2
Olfr107
Mid2
Cfap36
Sostdc1
Mpp4
Mnx1
Atp2b2
Nrf1
Ccr6
Ebf3
Zfp516
Bambi
Tshr
Cdk19
St3gal1
Xylt2
Arid4a
Sem1
Unc5c
Cdh12
Krt8
Bsx
Il31ra
Cwc27
Olfr806
Rasl11a
Atp6v0a1
Snca
Lrmp
Gas2
Fancf
Onecut3
Cd59a
Zcrb1
Pphln1
Enox1
Bcas2
Dpf2
Nutm1
Nop10
Sema6d
Rtn1
Pakap
Akap17b
Rbm27
Phactr3
Ccdc107
4930503B20Rik
Lmo1
Ypel1
Neil1
Nnt
Timm9
2700049A03Rik
Hoxc10
Qrfpr
Aadacl2fm1
L3hypdh
Jkamp
Lef1
Chst7
Cep350
Taf1d
4931406C07Rik
Slc7a7
Sfi1
Slc17a8
Cbx5
1600014C23Rik
Rnf43
Sash1
Serac1
Gtf2h5
Taar9
Dock10
Cpne3
Grpel1
Raet1d
Cyth3
Tspan15
Cybb
Olfr846
Peli3
Mroh1
Ndufaf4
Phc1
Arhgap36
Esr1
Tmco5
Ttc32
Arxes2
Shroom4
Neurod1
Copz1
Gm21119
Lats2
Gm15319
Tm4sf4
Pla2g2d
Vmn2r102
Psmc6
Pcdh1
Tmeff1
Fam43a
Gm4861
Ccpg1os
Ccpg1
Kdm2b
Ctbp2
Id3
AI429214
Abi2
Olfr108
Gpr139
Ebf2
Gapvd1
Tbc1d23
Sspn
Chmp1b
Ubqln4
Lamtor2
Emb
Lama2
Aff1
St18
Cacng1
Sulf2
Hopx
Pxn
Hadh
Sall4
Vnn1
Kcnh8
Gnat2
Celf4
Homer2
Hmga1b
Hmga1
Pgpep1l
Eml1
Alkbh5
Laptm4b
Mup4
Hacd4
Ilvbl
Myl12a
Pdlim3
Rbm47
Zfp608
Ldlr
2410004B18Rik
Kcnn2
Sh3glb2
Miga2
Stk33
Morf4l1b
Zeb2
Tnip3
Snap25
Fezf2
Angpt2
Btla
Gcgr
Tent5c
Hesx1
Cenpv
Ddx19b
Wdcp
Fkbp1b
Esrrb
Pfkp
Hmgxb4
Mobp
Fam13b
Vax1
Prkab1
Abca4
Arid1b
Creb3l1
Cdh20
Gja1
Spx
Vmn2r24
Pdia5
Sytl2
Zkscan1
Kctd9
Cdca2
Vmn2r82
Zbtb18
Baz1a
Dnajb8
Thrb
C8b
Fam171b
Gnai3
Csf2ra
Vtcn1
4930467E23Rik
Apbb2
Sec61g
Gm5820
Fap
Sptlc2
Ndst1
Arid3b
Muc15
Raet1e
Raet1c
Raet1b
Lims1
Tyr
Baz2b
Tsc22d1
Trex1
Shisa5
Lrrn2
Taf12
Ackr1
Rab3gap1
Slc6a5
Angpt1
Wwox
Lipm
Slc25a40
Dbf4
Smco4
Acadl
Akr1b3
Pag1
Gm12253
Mical3
Fzd5
Filip1
Pcdh12
Dennd4a
Knl1
Ptprk
Olfr1282
Frmd4a
Olfr1286
Etl4
Foxp1
Mamdc2
Acat3
Vgll1
Tmem30c
Tjp2
Myo1e
Ror1
Rps10
Pkdcc
Fgfr2
Thsd7a
Daam1
Zfp715
Primpol
Casp3
Cdh23
Dchs2
Slc35f3
Gcn1
Erich3
Cdk14
Hacd3
Anxa2
Kcnt2
Coro2a
Hapln1
Pgrmc2
Rps19
AB124611
Lig3
Tagln3
Zfp985
Sctr
Arap1
Tnks2
Zfp663
Nfe2l3
Dpp10
Fbxw2
Fgf13
Acbd5
Mylk
Smu1
Sart3
Iscu
Rgs8
Grik3
Nol4
Pmaip1
Myt1l
Lsm14a
Cry1
Fam102b
F2rl1
Cacnb2
Rab27a
Insyn2b
Irs4
Ifna13
Pkmyt1
Trub1
Bms1
Cfap54
Pdlim1
Slc10a1
C2cd5
Colec12
Cep112
Cnpy1
Fbxo32
Arhgef18
Fgd4
a
Olfr812
Eif2d
Prkcq
2510009E07Rik
Grm4
Chd7
Tmem178b
Slc10a4
Oasl1
Tamm41
Tcf7l1
Slc25a25
Nt5e
Reep3
Slc10a6
Lix1
Zfp763
Dpf3
Zfp534
Rbm8a
Zcchc24
Ext1
Fzd8
Il6st
Pde4b
Slc4a2
Cdk5
Cyp2c69
Fndc3b
Hmcn1
Tmcc2
Pcbp4
Abhd14b
Arhgef26
Usp25
Ifnb1
Sms
Arap2
4930474N05Rik
Armc3
Cog3
Slc25a19
Mrps25
Plcd3
Acbd4
Csta3
Radil
Mpzl1
Actn4
Dusp4
Lrrc36
Kctd19
Ank2
Tbpl1
Inip
Zfp3
Tbc1d12
Spaca7
Tent5a
Cibar2
Impdh2
Cyp7a1
Kcnk2
Otud3
Ptprz1
Pipox
Rps24
Polr3a
Rragd
Cemip2
Plagl1
Cyyr1
Gm6557
Myef2
Clcn4
Nfatc4
Bdnf
Dipk1c
Vmn2r2
Mrgprd
Veph1
Tmod1
Pxylp1
Fam241a
Rxrg
Selenos
Rcor3
Qser1
Tle1
Caly
Skil
Rgl1
Arpc5
Rorb
Grwd1
Mcur1
Kmt5c
Nefm
Prkaa1
Hadhb
Hadha
Cdkn2d
Sulf1
Clec1a
Sgo2a
Zfp960
Cga
Pde11a
Grem2
Zfp97
Rita1
Ddx54
H3c10
H2bc14
H2bc13
H2ac13
Mark1
Eef1akmt1
Slc25a4
Lipg
Acp6
Plekhm1
Myl12b
Thra
Vmn1r42
Gja5
Morc1
Cldn3
Olfr492
Gdf5
Enc1
Kat2a
Hspb9
Olfr1046
Znrf4
Wee2
Zbtb8a
Dennd11
Ttll3
Kifc3
Lrrc4c
Olfml1
Arhgef33
Ntn4
Crybg3
Ppia
Gm5165
Dusp23
Gm51425
Oser1
Fgf1
Aen
Arhgap33
Cyp2j12
Cilp
Trp53bp1
Phc2
Gm14410
Raph1
Gm14325
Ubiad1
Mtor
Prkar2b
Gabrg2
Foxd3
Atp5g2
Ankrd36
Galr3
Olfr60
Dll1
Myo1b
Gm7244
Nfkbil1
Atp6v1g2
Pde7b
Prkab2
Gpm6b
Bhlhe22
Xrcc6
Desi1
Zfhx4
Zfp217
Slc25a35
Rangrf
Cipc
Ankrd50
Trim2
Zdhhc16
Exosc1
D7Ertd443e
Lima1
Rnase4
Ang
Epn2
Ssu72
Ust
Plekha1
Dct
Saxo2
Efl1
Asf1b
Atp8a1
Nr6a1
Kdm3b
Gm8165
Psap
Taar7b
Apbb1
Fbxo31
Abracl
Mest
Efna5
Zfp931
Ppp1r17
Mrap
Adtrp
Adar
Zfp869
Myt1
Fech
Rce1
Zfp260
Sec24b
Chrna4
Myh3
Cdh24
Kcnh2
Gm6710
Gm14391
Klf6
Ppp3ca
Sv2a
Msi1
Fbln1
Pax6
Tbr1
Zfp707
Aqr
Col11a1
Scml4
Ank3
Zfp91
Lpxn
Cdca7
Kcnj16
Prpf40a
Arl6ip6
Nup93
Atp8b4
Serpinb2
Otol1
Mro
Tmem107
Cul2
Mrps33
Skap1
Slc39a10
Erg
Kdm1a
Tcf15
Cacna1c
Ttc30a2
Ptpro
Mad1l1
Bcas1
Usp44
Tle3
Ccnq
Mfng
Optn
Gramd1b
Gm38396
Pop5
Chmp6
Uqcc3
Lbhd1
Toporsl
Lingo3
Klhl29
Cotl1
Ogn
Pcbd2
Lama1
Arhgap28
Riok3
Cfap43
Arhgef2
Gm29797
Gm17026
Vmn2r5
Prtg
Irx5
Piwil1
Dip2b
Arid1a
Bnc2
Cbx1
Gnai1
Cyth1
Zfyve26
Rad51b
Nrep
Rln3
Il27ra
Gspt1
Lpar6
Mbtps2
Nr4a2
Usp15
Sh2d4a
Tenm2
Trafd1
Rabepk
Mrvi1
Erbb4
Lhx5
Kitl
Ehmt2
Gm17124
Synpo
Jmjd1c
Ubr5
Mgat4a
Zfp991
Smug1
Ppp3r1
Dnaic2
Tti2
Mical2
Micu2
Pitpnm1
Fgf15
Mbp
Mrpl22
Gemin5
Olfr62
Gm14326
Foxa2
BC048507
Armh4
Lrig3
Gm11837
Ranbp9
Lgals12
Gm9508
Neurod4
Nt5c3b
Klhl10
Atp1a1
Scg2
Fam222b
Ucma
Barhl1
Irx4
Ppfia4
Negr1
Wdr17
Cyp2b10
Ttc30b
Megf9
Snw1
Stk32a
Ubap1l
Wbp2nl
Mrpl45
Tbc1d9
Gpr137
Bad
Add1
Upf3a
Atxn7l1
Slc9a9
2210418O10Rik
Iapp
Iqschfp
Iqcj
Zfp423
Ppp1r2
Mrps28
Gng3
Bscl2
Rexo1
Sacs
Zfp984
Dstn
Myo10
Spidr
Ptms
Map7
Cd200
Slc16a7
Inpp4b
Myl1
Zfp473
Vrk3
Lrp2bp
Ankrd6
Bcar3
Krt222
Ush2a
Npffr2
Cdc42ep3
Crx
Taar6
Jagn1
Xrcc5
Txndc2
Zbtb2
Tmem202
Vmn2r4
Ddx6
Amacr
Zfp462
Zfp979
Tra2a
Ptpn14
Olfr1532-ps1
Scd3
Lefty2
Pclo
Lag3
Ppp2r2b
Otx2
Accsl
Mageh1
Ablim1
Smad5
Commd4
Gnas
Rnase9
Chpt1
Gm6712
Zfp987
Cldn14
Rdm1
Zc3h12c
Ppp6r3
Osgin2
Lrrc10b
Sohlh2
B3galt5
Asb4
Ncoa4
Zmym2
Sdk2
Elmo2
Olfr1240
Trim24
Tac4
Ccdc171
Tmc5
Elavl2
Col3a1
Chn1
Prph
Xkr5
Alk
Acaa2
Pex5l
Shroom3
Sox2
Lingo2
Vangl2
Tcaf1
Fzd10
Jup
Arid5b
Rps12
Kifc1
Zic3
A1bg
Gm1113
Gpr141
Col12a1
Fam110b
Skor1
Bcor
Tmem30a
Gm3411
Acyp1
Gm3752
Cep120
Tyro3
Rdh11
Gm3173
Optc
Tmem37
Gfra3
Gm2956
Ttc23
Pgm5
Hey2
Otud1
St6gal1
Stk38
Epb41l3
Ptpn9
Lmx1b
Exosc9
Gm4907
Prps1
Atxn1
Abr
Rfx4
Th
Il18rap
Hhip
H1f0
Gcat
Ndufa4l2
Rab5a
Cast
Srp19
Apobec2
Rag1
Acvr2a
Zfp382
Drd2
Vkorc1l1
Lhx9
Otx1
Alpk3
Has2
Pik3ap1
Meox1
Fbxo7
Asic1
Phlpp1
Smad2
Asic5
Por
Myb
Spns1
Kcnv2
Pop4
Spock3
Ints4
Clasp2
Tctex1d1
Fkbp5
Zbtb11
Grap2
Pdha1
Sh2d7
Smndc1
Gm3696
Neurog2
Smarcal1
Atp2c1
Sox5
Otoa
Rraga
Gpr1
Nbdy
Plekhg2
Atp6v1e2
Unc13b
Nxph4
Zfpm1
Zfp385b
Zmat4
Fabp7
Hspa8
Gatad1
Cacng4
Usp1
Lsm1
Bag4
Lrpap1
Lrrc30
Gtdc1
2610042L04Rik
Trio
Ncoa3
Gm10406
Ttc34
Syt2
Errfi1
Rgmb
Phyh
Nkx3-2
Tmem273
Zc3h4
Trhde
Pcnx
Tdg
Drg1
Cldn10
Runx1t1
Rex2
Rbfox2
Tcf12
Spcs3
Gipc2
Creb5
H3c11
H2bc22
H2ac22
Sirt4
Frem1
Mov10l1
Mlc1
Synpr
Nemf
Fam76b
Cep57
Zfp980
Nmnat3
Tfeb
Crppa
Cd300lg
Ifitm2
Traf3ip1
H2-T23
Hmx1
Acpp
Ccng1
Ccn2
Foxb1
Gm3739
Tcl1b3
Mlxip
B4galt5
Cd36
Pias1
Naa40
Ccdc88c
Lamc1
Pak2
Rnf38
Mcub
Gmnn
Eya1