ChIP-Atlas: Target genes

Potential target genes for Lhx3

Query protein: Lhx3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1706967 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Lhx3's Target genes

◢ Lhx3: Average

◢ SRX1706941: mESCs, differentiated

◢ SRX1706942: mESCs, differentiated

◢ SRX1706944: mESCs, differentiated

◢ SRX1706945: mESCs, differentiated

◢ SRX1706946: mESCs, differentiated

◢ SRX1706947: mESCs, differentiated

◢ SRX1706952: mESCs, differentiated

◢ SRX1706953: mESCs, differentiated

◢ SRX1706958: mESCs, differentiated

◢ SRX1706959: mESCs, differentiated

◢ SRX1706965: mESCs, differentiated

◢ SRX1706966: mESCs, differentiated

◣ SRX1706967: mESCs, differentiated

◢ SRX1706968: mESCs, differentiated

◢ SRX1706974: mESCs, differentiated

◢ SRX1706975: mESCs, differentiated

◢ SRX1706976: mESCs, differentiated

◢ SRX2388060: mESCs, differentiated

◢ SRX2388063: mESCs, differentiated

◢ SRX2388064: mESCs, differentiated

◢ SRX2388067: mESCs, differentiated

◢ SRX2388068: mESCs, differentiated

◢ SRX2388069: mESCs, differentiated

◢ SRX2388070: mESCs, differentiated

◢ SRX2388071: mESCs, differentiated

◢ SRX2388072: mESCs, differentiated

◢ SRX2388074: mESCs, differentiated

◢ Lhx3: STRING

Cars
Nfe2
Snx18
Kank1
Sipa1l1
Frmd4a
Ubxn10
Pla2g2c
Zfp879
Mcf2
Gm4791
Cdk19
Tspan15
Prkab1
Krt8
Coro2a
Zfp516
Pakap
Zfp608
Sostdc1
Kcng3
Pmfbp1
Spp2
Rab38
Atg4c
Akap17b
Slc17a8
Nhsl1
Myt1l
Copz1
Nptx2
Rnase12
Rnase11
Cfap36
Ndufaf4
Mpi
Pkdcc
Tagln3
Grpel1
Neurod1
Nrp1
Lrmp
Kdm4c
Atp2b2
Cldn3
Bcas2
Edar
Olfr492
Lmo4
Pgpep1l
Morc1
Olfr1286
Enc1
Psmc6
Bin2
Usp25
Lsm14a
Tmeff1
Fam43a
2410004B18Rik
Fam171b
Zkscan1
Gja5
Aen
Gdf5
1600014C23Rik
Daam1
Bsx
Ypel1
Lrrc52
Sema5b
Znrf4
Spaca7
Sepsecs
Angpt2
Fgf1
Cdh23
Alkbh5
Taf1d
4931406C07Rik
Gm5820
Fndc3b
Lmo1
Prkab2
Lmo3
Sema6d
Hoxc10
Kat2a
Hspb9
Pcdh1
St18
Gnat2
Ndst1
Dennd11
Gas2
Fancf
Tmco5
Hmga1b
Hmga1
Rasl11a
Peli3
St3gal1
Eml1
Nt5c2
Ina
Ntn4
Sytl2
Mpp4
Apbb2
Olfml1
Col6a6
Cldn34d
Ntn1
Pxn
Ttll3
Olfr1046
Cdh12
Abca4
Nrf1
Fezf2
Grm4
Ext1
Tnfrsf19
Snca
Gm5165
Vmn2r2
Dnajb8
Foxd3
Lrrc4c
Mid2
Wee2
Kifc3
Dock10
Mylk
Zfp703
Rbm47
Ptpn12
Chmp1b
Timm9
2700049A03Rik
Cyp2j12
Crybg3
Tmem30c
Kcnn2
Rgs8
Trex1
Shisa5
Cybb
Lrrtm4
Ddx19b
Gm7244
Ppia
Myh3
Neil1
Knl1
Creb3l1
Ubiad1
Mtor
Toporsl
Lef1
Rab27a
Uts2b
Fbln1
Fech
Msi1
AI429214
Dusp23
Hopx
Upf3a
Slc25a40
Dbf4
Ssu72
Mnx1
Gpr139
Cbx5
Ppp1r17
Pcdh12
Zcrb1
Pphln1
Trp53bp1
Raph1
Dipk1c
Olfr1282
Trim2
Ptprz1
Sulf2
Nnt
Ifnb1
Hoxa1
Btla
Ttc32
Gm51425
Oser1
Lrrn2
Lix1
Rbm27
Etl4
Taar7b
Zfp715
Pde7b
Nrep
Qrfpr
4930503B20Rik
Plekhh3
Cntnap1
Ccr10
Gabrg2
Zfp707
Arhgap33
Psap
Chst7
Bambi
Irgm2
Plekha1
D7Ertd443e
Chd7
Arhgef33
Mrap
Tmem178b
Vax1
Myo1b
Abi2
Gpm6b
Dll1
L3hypdh
Jkamp
Phc2
Tshz2
Zdhhc16
Exosc1
Erg
Sv2a
Riok3
Ldlr
Xrcc6
Desi1
Mrps33
Ppp3ca
Htr3a
Rab3gap1
Celf4
Plekhm1
Cfap43
Taar6
Otx1
Trub1
Zfhx4
Tnip3
Ttc30a2
Zbtb8a
Cipc
Chrna4
Bhlhe22
Atp5g2
Mest
Cnpy1
Arhgap36
Sms
Ust
Micu2
Taf12
Foxp1
Mgat4a
Ankrd50
Apbb1
Nfkbil1
Atp6v1g2
Ank3
Arid1b
Atp6v0a1
Crx
Kpna1
Angpt1
Pdlim1
Lima1
Klf6
Smco4
Dpf2
Slc39a10
Nr6a1
Acbd5
Sash1
Ccnq
Cacng1
Kdm3b
Skap1
Efna5
Cilp
Galr3
Asf1b
Tm4sf4
Pop5
Fgf15
Mamdc2
Hmgxb4
Arxes2
Saxo2
Efl1
Fbxo31
Bdnf
Ccpg1os
Ccpg1
Adtrp
Morf4l1b
Zcchc24
Optc
Olfr60
Mfng
Scg2
Rxrg
Zfp3
Sctr
Tent5a
Acadl
Pitpnm1
Cfap54
Epn2
Atp1a1
Bnc2
Nfatc4
B3galt5
Myt1
Arhgef2
Zfp663
Tcf7l1
Nt5c3b
Klhl10
Fgd4
Pax6
Tcf15
Laptm4b
Zfp869
Akr1b3
Ankrd36
Olfr107
Atp8b4
Rce1
Arap1
Synpo
Zfp960
Wdcp
Fkbp1b
Tmem30a
Raet1d
Ppfia4
Serac1
Gtf2h5
Jagn1
Exosc9
Cotl1
Smndc1
Pcbd2
Drd2
Snw1
Serpinb2
Mro
Hmcn1
Slc25a25
Cyp2b10
Vangl2
Slc16a7
Atp8a1
Slc10a1
Nol4
Slc7a7
Dnaic2
Ubap1l
Tmcc2
Otol1
Fzd8
Esrrb
F2rl1
Gm9508
Irx4
Rorb
Kdm2b
Scml4
Uqcc3
Lbhd1
Vnn1
Zfp462
Hacd4
Ackr1
Tmem202
Tcl1b3
Kcnh2
Chmp6
Rtn1
Arid1a
Tjp2
Ubqln4
Lamtor2
Hoxb2
Ehmt2
Gspt1
Gm1113
Rnase4
Ang
Slc10a4
Iapp
Lpar6
Lrig3
Pcbp4
Abhd14b
Dct
Rraga
Tnks2
Zfp473
Vrk3
Baz2b
Pxylp1
Tbc1d23
Sh2d4a
Cacna1c
Gm29797
Hadh
Cd200
Elavl2
Ppp3r1
Ccdc107
Elmo2
Fbxo32
Cibar2
Tbpl1
Nup93
Kdm1a
Mobp
Neurod4
Ttc30b
Lrp2bp
Col3a1
Tbr1
Mup4
Raet1e
Raet1c
Raet1b
Tmem107
Map7
Zfp260
Ablim1
Pdlim3
Usp44
Prkar2b
Cul2
Hspa8
Ror1
BC048507
Acat3
Tac4
Asic1
Slc35f3
Gramd1b
Xrcc5
Gm21119
4930467E23Rik
Shroom3
Iqschfp
Iqcj
Gm14325
Skor1
a
Gm14410
Bcas1
Ints4
Lingo3
Ptms
Lag3
Bcor
Baz1a
Fam13b
Tcf7l2
Agpat3
Armc12
Gm4861
Eef1akmt1
Tle3
Myef2
Cyth3
Smad5
Mical2
Tcaf1
Clps
Zfp423
Filip1
Enox1
Taar9
Sall4
Trafd1
Dstn
Foxb1
Lama2
Adar
Arhgap28
Otoa
Zfp217
Pik3ap1
Lama1
Spx
Cdca7
Ccr6
Shroom4
Dennd4a
Jmjd1c
Zfp385b
Zfp97
Vmn2r5
Gng3
Bscl2
Tra2a
Fam76b
Cep57
Mageh1
Lingo2
Ankrd6
Gm6712
Ogn
Smug1
Fam222b
Cyp7a1
Ermn
Meis3
Nt5e
Ovca2
Lhx5
Ush2a
Prkaa1
Col11a1
Optn
Ubr5
Rnase9
Irx5
Insyn2b
Ranbp9
Alk
Txndc2
Cep120
Rln3
Il27ra
Tmem171
Usp15
Mpzl1
Ucma
Lipg
Megf9
Acaa2
Il18rap
H1f0
Gcat
Kitl
Inip
Wdr17
Hey2
Otud1
Gm3739
Tgfbr1
C2cd5
Zc3h12c
Cdc42ep3
Vmn2r4
Gm15319
Tctex1d1
Tubb1
Acyp1
Gm3752
Gm2956
Fabp7
Add1
Cldn10
Axin2
2210418O10Rik
Crppa
Atxn7l1
Fzd10
Runx1t1
Npffr2
Col12a1
Mrps28
Tmem273
Mrpl45
Mrvi1
Myl1
Sdk2
Olfr108
Bcar3
Smarcal1
Sacs
Gm4907
Cyyr1
Chpt1
Gipc2
Lgals12
Trio
Gnai1
Gm3411
Zfp667
Slc6a5
Arhgef18
Gm1604b
Asb4
Por
Vkorc1l1
Gm38396
Mbp
Inava
Grasp
Zfp931
Olfr1240
Gm17660
Gm3696
Ptpro
Inpp4b
Mrpl22
Gemin5
Gigyf2
Gfra3
Traf3ip1
Meox1
Atp6v1e2
Spcs3
Olfr1532-ps1
Erbb4
Tbc1d9
Sh3glb2
Miga2
Gcn1
Atp2c1
Nxph4
Pak2
Aasdh
Zeb2
Gm10406
Cd300lg
Ppp1r2
Syt16
Gtf2a1l
Epb41l3
Tamm41
Ttc34
Kcnk2
2610042L04Rik
Fgf12
Abr
Lrrc30
Hapln1
Cypt3
Cyth1
Acvr2a
Rcor1
Abracl
Zfyve26
Rad51b
Tti2
Zfpm1
Olfr806
Pex5l
Myo10
Dll4
Fzd5
Rexo1
Myb
Serpine3
Slc25a35
Rangrf
Cast
Gmnn
Wdr95
Wdr63
Th
Clnk
Cma1
Gm6710
Gm14391
Zfp91
Lpxn
Piwil1
Lrrtm2
Igfbpl1
Kctd9
Cdca2
Sec24b
Rab5b
Il31ra
Mbtps2
Card19
Kifc1
Gm3173
Shisa3
Pbx1
Arid5b
Magi3
Mrps25
Prtg
Crybb3
Pou3f1
Rag1
Clip1
Susd2
Wbp2nl
Arid3b
Ndst4
Creb5
Myog
Kcnj16
Grik3
Thrb
Lrrc10b
Stk33
Ptpn14
Impdh2
Slc9a9
Rnf220
Sox5
Trhde
Dusp4
Epha7
Atxn1
Syt2
Bms1
Pcnx4
Zic3
Galc
Anks1b
Ilvbl
Zbtb32
Kmt2b
Cldn7
B4galt5
Sall1
Atg7
Ddx6
Sgca
Cdh20
Arsi
Cdh24
Dip2b
Zfp991
Armh4
Gm11837
Tafa1
Drg1
Sh2b2
Mex3a
Tshr
Ndufa4l2
Slc25a19
Nfe2l3
Zbtb2
Pclo
Mad1l1
Arhgap32
Frmpd4
Fgfr2
Arid4a
Smad2
Hmx1
Rheb
Mical3
Phc1
Lig3
Asic5
Zmat4
Chodl
Jup
Tdg
Sirt4
Pbld2
Hnrnph3
Nek11
Aste1
Ak2
Stk32a
Cga
Klhl29
Kcnv2
Phactr3
Naa40
Galnt5
Negr1
Arap2
Osgin2
Npc1
Prdx6
Fam110b
Acvr1c
Prkacb
Ank2
Fnbp1
Pde4b
Tmc5
Frem1
Galk1
Pcdh15
Ccdc171
Spock3
Lefty2
Tbx3
Slc25a21
Slain1
Gm14326
Cacng4
Agtrap
Pdha1
Hesx1
Itprid1
Psmc2
Dnajc2
Zic4
Abhd6
Rps12
Rnf38
Scd3
Lhx9
Dpp10
Zfp979
Alpk3
Nkx3-1
Pla2g2d
Fbxw2
Olfr735
Clca1
Armc3
Skil
Cldn14
Cnmd
Chn1
Lnpk
Gpr142
Btbd17
Rdh11
Efnb2
Cln6
Tac1
Radil
Txndc9
Eif5b
Rdm1
Zmym2
Gm3005
Ccdc88c
Ncald
Slc10a6
Nr0b2
Slc13a1
Trim24
Rbfox2
Bod1l
Ferd3l
Plcd3
Acbd4
C1ql2
Neo1
Rhoh
Aff1
Tmem156
Rnf165
Trdn
Ybx1
Spidr
Lrch4
Erich3
Gse1
Kcnh8
Ppargc1b
Abcd3
Adgrg7
Cldn1
Prdm12
Tecrl
Commd4
Gas1
Acpp
Cdr2
Mfsd13b
Dpp8
Gpr137
Bad
Gnas
Tmem37
Stk38
Sulf1
Olfr986
Hhip
Tcf12
Cacna1i
Luzp1
Tmem119
Plekhg2
Nkx3-2
Alcam
Fmc1
Spns1
Nbdy
Lrp6
Acsm2
Sohlh2
Ehbp1
Ltbp1
Nr5a2
Phlpp1
Trappc6b
Stx12
Hecw2
Eif2d
Klhl24
Fam32a
Fam149a
Ascc3
Dock11
Thsd7a
Arhgef28
Zranb1
Cdh3
Stambpl1
Tex37
Atg2a
Emb
Zc3h4
Psd3
Ripor2
Mbnl1
Dzip1l
Id3
Hacd3
Grap2
Defb2
Mfap3l
Rabepk
Grb2
Aebp2
Mcub
Rwdd1
Foxe1
Myl12a
A1bg
Myl12b
Tuba3b
Defb10
Olfr1494
Slc5a4a
Med25
Fuz
1700024G13Rik
Prpf18
Tesk2
Amph
Zfp984
Tmem242
Tex14
Acacb
2510009E07Rik
Nme7
Blzf1
Srp19
Gtf3c4
Cnnm2
Unc13b
Cry1
Psmd4
Hspa12a
Eno4
Epha1
Phyh
Rs1
Lct
H2al1j
Tuba1b
Rpia
Qrich1
Haao
Gm33933
Rbm20
Pbld1
Rbms1
Il34
Tyro3
Has2
Tmem71
Camkv
Actl11
Ccdc187
Rab21
Sh2d7
Grip2
Slc48a1
Schip1
C4bp
Nmnat3
Ccdc90b
Crabp1
Stra6
Trarg1
Bhlha9
Fyco1
Gsc
Gm2237
Dpysl3
Mov10l1
Mlc1
Ifitm2
Tars2