ChIP-Atlas: Target genes

Potential target genes for Lhx3

Query protein: Lhx3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1706975 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Lhx3's Target genes

◢ Lhx3: Average

◢ SRX1706941: mESCs, differentiated

◢ SRX1706942: mESCs, differentiated

◢ SRX1706944: mESCs, differentiated

◢ SRX1706945: mESCs, differentiated

◢ SRX1706946: mESCs, differentiated

◢ SRX1706947: mESCs, differentiated

◢ SRX1706952: mESCs, differentiated

◢ SRX1706953: mESCs, differentiated

◢ SRX1706958: mESCs, differentiated

◢ SRX1706959: mESCs, differentiated

◢ SRX1706965: mESCs, differentiated

◢ SRX1706966: mESCs, differentiated

◢ SRX1706967: mESCs, differentiated

◢ SRX1706968: mESCs, differentiated

◢ SRX1706974: mESCs, differentiated

◣ SRX1706975: mESCs, differentiated

◢ SRX1706976: mESCs, differentiated

◢ SRX2388060: mESCs, differentiated

◢ SRX2388063: mESCs, differentiated

◢ SRX2388064: mESCs, differentiated

◢ SRX2388067: mESCs, differentiated

◢ SRX2388068: mESCs, differentiated

◢ SRX2388069: mESCs, differentiated

◢ SRX2388070: mESCs, differentiated

◢ SRX2388071: mESCs, differentiated

◢ SRX2388072: mESCs, differentiated

◢ SRX2388074: mESCs, differentiated

◢ Lhx3: STRING

Snx18
Kank1
Cars
Nfe2
Zfp879
2410004B18Rik
Kdm4c
Sipa1l1
Usp25
Frmd4a
Mcf2
Morc1
Atg4c
Lrrc52
Nrp1
Cdk19
Olfml1
Ubxn10
Pla2g2c
Gabrg2
Snca
Tspan15
Sema6d
Daam1
Spp2
Kcng3
Zfp516
St18
Fam171b
Prkab1
Nptx2
Gm4791
Coro2a
Ttll3
Nt5c2
Ina
Pmfbp1
Gdf5
Zfp608
Cldn3
Gm7244
Ust
Gnat2
Ndufaf4
Tshz2
Atp2b2
Tmeff1
Tagln3
Psmc6
Bcas2
Vmn2r2
Gas2
Fancf
Olfr1286
Slc17a8
Krt8
Chst7
Ypel1
Atp8b4
Olfr1046
Lmo1
Lrrn2
Usp44
Neurod1
Gm5820
Lmo4
Zkscan1
Grpel1
Lix1
Col6a6
Ifnb1
St3gal1
Ppia
Kat2a
Hspb9
Akap17b
Bhlhe22
Mical2
Taf1d
4931406C07Rik
Lsm14a
Dock10
Cdh23
Dct
Fezf2
Edar
Rabepk
L3hypdh
Jkamp
Mid2
Eml1
Ntn4
Trp53bp1
Copz1
Ttc30a2
Sema5b
Htr3a
Kcnn2
4930503B20Rik
Knl1
Sepsecs
Pde7b
Dipk1c
Rnase12
Rnase11
Erg
Dnajb8
Gramd1b
AI429214
Lef1
Hmgxb4
Saxo2
Efl1
Lrrc4c
Pakap
Foxp1
Creb3l1
Taf12
Timm9
2700049A03Rik
Myt1l
Mnx1
Arid1b
Ccnq
Alkbh5
Raet1d
Celf4
Sohlh2
Hoxa1
Rab3gap1
Pla2g2d
Bsx
Angpt2
Adtrp
Apbb1
Ttc32
Lmo3
Mrps33
Tmem202
Tmcc2
Znrf4
Micu2
Vmn2r5
Myt1
Mpi
Crybg3
Cfap36
Etl4
Spaca7
Pcdh1
Dpf2
Olfr1532-ps1
Cipc
Prkab2
Zfhx4
Ndst1
Smug1
Ntn1
Enc1
Prkar2b
Lrrtm4
Rasl11a
Fbln1
Enox1
Ppfia4
Atp6v1e2
Tmco5
Rab38
Sall1
Epn2
Mrap
Ormdl3
Ptpn12
Angpt1
Ush2a
Uts2b
Raph1
Pcnx
Bcas1
Zfp663
Slc25a25
Cldn34d
Tnfrsf19
Frat2
Mpp4
Filip1
Ank3
Mrps28
Apbb2
Acbd5
Arhgef33
Zdhhc16
Exosc1
Gja5
Slc10a4
Gm14325
Ppp1r17
Rab27a
Cdh12
Dip2b
Fech
Trafd1
Tbpl1
Fbxo31
Pgpep1l
Ext1
Vax1
Cilp
Cbx5
Myh3
Neil1
Olfr846
Cfap43
Pcdh12
D7Ertd443e
Hapln1
Wdr17
Kitl
Th
Mettl26
Mcrip2
Lrmp
Tmem156
a
Kctd9
Cdca2
Xrcc5
Hoxc10
Zfp260
Kifc3
Tmem178b
Zfp869
Arap1
Creb5
Tmem30c
Zfp91
Lpxn
Alcam
Plekhm1
Chpt1
Pkdcc
Tra2a
Ubqln4
Lamtor2
Efna5
Klf6
Atxn7l1
Gpm6b
Lhx5
Clasp2
Slc10a1
Nrf1
Iapp
Dennd4a
Thrb
Tle3
Ubap1l
Fam110b
Dynll2
Pik3ap1
Clca1
Zfp217
Muc15
Peli3
Lrrtm2
Serpinb2
Bin2
Arhgap36
Pttg1ip2
Mmrn1
Kpna1
Ctbp2
Megf9
Gspt1
Atp2c1
Ccdc107
Inpp4b
Agtr2
Luzp1
Cfap54
Cacng1
Slc35f3
Vtcn1
Ripor2
Scn2a
Zfp931
Elavl2
Nkx3-2
Clnk
Atp5g2
Nfatc4
Galr3
Hmga1b
Hmga1
Olfr1282
Gmnn
Zfp960
Sh3glb2
Miga2
Bco1
Myl1
Zfpm1
C1ql2
Irx5
Ech1
Sytl2
Dyrk3
Vnn1
Cotl1
Sh2d7
Tas2r119
Stk32a
Lrrc30
Baalc
Xrcc6
Desi1
Nt5c3b
Klhl10
Olfr319
Atp6v0a1
Cln6
Gm4861
Gm51425
Grm4
Acadl
Slc16a7
Hspa8
Cep120
Rapgef6
Gatad1
Gm14410
Ccr6
Phc2
Gm5165
Kdm1a
Vkorc1l1
Gse1
Raet1e
Raet1c
Raet1b
Rnase4
Ang
Otol1
Isl1
Mamdc2
Elmo2
Chn1
Adamts18
Zbtb8a
Mylk
Hmcn1
Runx1t1
Trex1
Shisa5
Tamm41
Tshr
Tnks2
Ddx6
Sh2b2
Gm21119
Tnip3
4930467E23Rik
Zfp664
Ccdc92
Axin2
Zcchc24
Cdca7
Rtn1
Tbr1
Add1
Ppa1
Abhd6
Fam43a
Gm38396
Ppp6r3
Psap
Dstn
Myo10
Olfr121
Igsf5
Cul2
Tsga10
Gpr85
1600014C23Rik
Sulf2
Skor1
Taar9
Nbeal2
Ccdc12
Cyth3
Ptms
Lag3
Bcor
Oser1
Slc39a10
Iqschfp
Iqcj
Cdh6
Nck2
Dll1
Sv2a
Cacna1i
Ranbp9
Nmnat3
Tjp2
Tsc22d1
Hadh
Otx1
Scn4a
Cnpy1
Spcs3
Lnpk
Gm51573
Vmn2r82
Gm6710
Gm14391
Tmem74
Ankar
Hecw2
Lpar6
Map7
Iqsec1
Kcnh8
Erich3
Otoa
Ppp3ca
Olfr806
2510009E07Rik
Synpo
Cacng4
Fgfr2
Card19
Nfkbil1
Atp6v1g2
Trim2
Cibar2
Prtg
Mgat4a
Nhsl1
Gnai1
Trim24
Trio
Lcor
Tmem107
Cep350
Epb41l3
Fgf1
Dnaic2
Rcn1
Eef1akmt1
Gm15319
Wwox
Crx
Meox1
Neurog2
Tmem71
Pxylp1
Tbx3
Fyco1
Asf1b
Vmn2r102
Pcbp4
Abhd14b
Commd4
Sdk2
Syt2
Marchf9
Cdk4
Myo1b
Zfyve26
Rad51b
Mrpl45
Tyro3
Unc5c
Ankrd36
Ehmt2
Upf3a
Nkx3-1
Mageh1
Col12a1
Lrrc9
Rxrg
Zfp703
Smco4
Rnase9
Asic1
Fgd4
Usp15
Smad5
Pak2
Epha7
Scml4
Gnas
Kifc1
Folr2
Gpr139
Kcnk2
Gnat3
Chmp1b
Ptpro
Actn4
Tmem30a
Cnmd
Lyrm9
Six1
Irx4
Zbtb18
Tdg
Wee2
Pop5
Snw1
Zfp827
Dennd11
Arid1a
Zfp473
Vrk3
Acyp1
Pum2
Sostdc1
C2cd5
Vmn2r4
Gm3752
Polr2m
2310079G19Rik
Ubiad1
Mtor
Jmjd1c
Ankrd50
Tent5a
Tcf15
Rbm27
Chrna4
Pcbd2
Zbtb2
Med25
Fuz
Ipo8
4930524B15Rik
Nbdy
Olfr60
Ttc34
Cldn7
Rag1
Trp53inp2
Arid2
Ermn
Cntn1
Txndc2
Schip1
Spx
Pitpnm1
Acvr2a
Il5ra
Gulp1
Msi1
Dzip1l
Plch1
Wdcp
Fkbp1b
Olfr735
Rnf220
Ppp3r1
Sacs
Pbld2
Hnrnph3
Smarce1
Traf3ip3
Nnt
Foxd3
Baz2b
Phactr2
Morf4l1b
Cdc42ep3
Drd2
Esrrg
Gnb1
Tbc1d9
Rbm47
Nol4
Kcnh2
Ablim1
Cd300lg
Dock11
Zfp715
Gm2956
Zc3h4
Wdr35
Prpf40a
Arl6ip6
Cast
Higd1c
Krt26
Zadh2
Tshz1
Toporsl
Sstr1
Trib1
Spata1
Gng5
Cyth1
Gm3739
Mapre1
Omt2a
Ereg
Pclo
Guf1
Dipk2a
Slc25a40
Dbf4
Slc25a35
Rangrf
Cyyr1
Mfng
2210418O10Rik
Spns1
Defb2
Tuba3b
Peli1
Olfr492
Crppa
B4galt5
Vpreb1
Top3b
Olfm3
Vmn2r7
Adra2a
Mobp
Gabrr3
Zeb2
Kdm3b
Mybl1
Dpep1
Kctd20
Sctr
Negr1
Meis3
Rhbdd1
Setd1b
Pdgfrb
Ddx19b
Cdh24
Alk
C2cd4d
Pgk1
F2rl1
Rce1
Ttc30b
Gm1113
Sox5
Naa40
Clip1
Plppr1
Lingo3
Gcn1
Vgll1
Fabp7
Ngef
Neu2
Hs3st4
Lgi4
Fxyd1
Ldlr
Lama1
Rcor3
Fam32a
Msantd4
Sgcz
Hsf2
Olfm4
Mc4r
Anks3
4930451G09Rik
Skap1
Inip
Zfp423
Nek11
Aste1
Gm2237
Ankrd6
Asic5
Nsmce3
Epc1
Laptm4b
Atp8a1
Sall4
Xkr5
Gm3411
Sox4
Dusp10
1700056E22Rik
Ncam1
Nectin2
Sf3b2
Gal3st3
Fndc3b
Rufy3
Rsu1
Klhdc8b
Ccdc71
Ezr
Gm14326
Myl12a
Myl12b
Sncaip
Bmp2k
Ccpg1os
Ccpg1
Abracl
Mest
Gng3
Bscl2
Zfp707
Zfp991
Spidr
Gm3696
Pde11a
Ppm1e
Usp6nl
Chrna9
Chd7
Mro
Cacna1c
Insyn2b
1110032F04Rik
Asap1
Asb4
Zmym2
Dusp23
Fam222b
Hey2
Zc3h10
Rpl41
Olfr122
Plekhh3
Cntnap1
Ccr10
Nr4a2
Mical3
Cyp2b10
Prps1
Ccdc88c
Ckap2
Kmt5c
Cldn1
Carf
Rap1b
Crtam
Lingo4
Klhl29
Cry1
Xylt2
Ptprz1
Thsd7a
Gpbp1
Samsn1
Olfr1287
Skil
Gm10406
Tmco3
Dcun1d2
Steap2
Fbxo32
Erbb4
Atp1a1
Ucma
Pop4
Ndst4
Gpc6
Hdac5
Lin7a
H1f0
Gcat
Cdk14
Taf5
Ugt1a9
Arxes2
Nr6a1
Nfe2l3
Scg2
Tcerg1
Prop1
Nde1
Marf1
Optn
Rdm1
Lingo2
Fzd10
Fmc1
Tac1
Poln
Haus3
Grasp
Rgs8
Hacd4
Vangl2
Prkrip1
Nedd4
Vps50
Hepacam2
Lima1
Prickle1
Stx18
Zfp3
Akr1b3
Radil
Fbxo28
Osbpl8
Mospd1
Trak2
Col3a1
Phlpp1
Ppp6c
Tnrc6a
Ube2j1
Cybb
Taar7b
Zc3h12c
Errfi1
Pag1
Arfgap2
Sfi1
Abca4
Ppp1r2
Pde1b
Zfyve16
Mad2l2
Draxin
Col11a1
Atxn1
Apobec2
Ankrd13b
Git1
Exoc1
Pax6
Acvr1c
Gas1
Clvs1
Psme4
Aen
Sms
Tm4sf4
Ubr5
Armh4
Bcar3
Rraga
Zfp212
Larp4
Sorbs2
Vav2
Abi2
Fgd5
Bnc2
Ptpn3
Celf2
Prcc
Tbc1d5
Bms1
Abcd3
Tex21
Phf12
Usp38
Psd3
Dact2
Akr1e1
Spink5
Klhl24
Agk
Oxr1
2610301B20Rik
Mbp
Acp6
Arid5b
Mov10l1
Mlc1
Mitf
Adad2
Bambi
Gpr141
Lsm1
Bag4
Rere
Mef2c
Timm10
Smtnl1
Ankrd40
Shisa3
Lrp2bp
Qrich1
Zfp97
Cog3
Rbfox2
Tesk2
Fbxw2
Cga
Basp1
Lipm
Jagn1
Amph
Alyref2
Nras
Ank2
Dpys
Rgmb
Igfbpl1
Atg16l1
Grwd1
Tex14
Shisa9
1700066M21Rik
Neurod4
Usp1
Lhx3
Tmprss6
Onecut3
Ccdc171
2610042L04Rik
Frem1
Emp1
Ip6k2
Tti2
Sgca
Mup5
Rundc1
Ptges3l
Golm1
Rab5b
Mrpl15
Sulf1
Nuak1
Kcnj16
Prkaa1
Gm9508
Arid4a
Golga7
BC107364
Olfr1058
Lama2
Cwf19l2
Erc1
Fgf15
Ttc23
Synpr
Cma1
Trarg1
Bhlha9
Ssh2
Olfr115
Egf
Ctnnbip1
St7l
Capza1
Sspn
Gm6712
Med6
Notch1
Rnft1
Fzd2
Arap2
Cln5
Bard1
Aff4
Mycn
Prnp
Prn
Dach1
Rftn2
G3bp2
Tnfrsf11b
Ntm
Map2
Il31ra
Ascl1
Esrrb
Irgm2
Sash1
Zcrb1
Pphln1
Qrfpr
Phc1
Pxn
Onecut2
Pdlim3
Btla
Shroom4
Ror1
Kdm2b
Mup4
Arhgap33
Cyp2j12
Trub1
Csf2ra
Olfr107
Emb
Myef2
Pdlim1
Serac1
Gtf2h5
Esr1
Lats2
Nutm1