ChIP-Atlas: Target genes

Potential target genes for Lhx3

Query protein: Lhx3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2388072 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Lhx3's Target genes

◢ Lhx3: Average

◢ SRX1706941: mESCs, differentiated

◢ SRX1706942: mESCs, differentiated

◢ SRX1706944: mESCs, differentiated

◢ SRX1706945: mESCs, differentiated

◢ SRX1706946: mESCs, differentiated

◢ SRX1706947: mESCs, differentiated

◢ SRX1706952: mESCs, differentiated

◢ SRX1706953: mESCs, differentiated

◢ SRX1706958: mESCs, differentiated

◢ SRX1706959: mESCs, differentiated

◢ SRX1706965: mESCs, differentiated

◢ SRX1706966: mESCs, differentiated

◢ SRX1706967: mESCs, differentiated

◢ SRX1706968: mESCs, differentiated

◢ SRX1706974: mESCs, differentiated

◢ SRX1706975: mESCs, differentiated

◢ SRX1706976: mESCs, differentiated

◢ SRX2388060: mESCs, differentiated

◢ SRX2388063: mESCs, differentiated

◢ SRX2388064: mESCs, differentiated

◢ SRX2388067: mESCs, differentiated

◢ SRX2388068: mESCs, differentiated

◢ SRX2388069: mESCs, differentiated

◢ SRX2388070: mESCs, differentiated

◢ SRX2388071: mESCs, differentiated

◣ SRX2388072: mESCs, differentiated

◢ SRX2388074: mESCs, differentiated

◢ Lhx3: STRING

Cars
Kank1
Snx18
Nfe2
Ubxn10
Pla2g2c
Spp2
Rab38
Atg4c
Pmfbp1
Pgk1
Nptx2
Gas2
Fancf
Col6a6
Kdm4c
Mcf2
Kpna1
Zfp516
Snca
Sema5b
Lrrc52
Zfp703
Foxa2
Ebf3
Nrp1
Tnfrsf19
Slc17a8
Tshz2
Phactr3
Bambi
Zfp879
Cfap36
Ccr6
Rnase12
Rnase11
St3gal1
Edar
Sipa1l1
Cldn34d
Il31ra
Atp2b2
Lmo4
Bin2
Olfr846
Gm21119
Gm15319
Unc5c
Sspn
Copz1
Nt5c2
Ina
Plekhh3
Cntnap1
Ccr10
Cdk19
Vtcn1
Sema6d
Mpp4
Sepsecs
Ndufaf4
Rab3gap1
Lrrtm4
Hoxa1
Frmd4a
Cacng1
Lmo1
Muc15
Olfr108
Taar9
Bcas2
St18
Tshr
4930467E23Rik
Fam171b
Ctbp2
Mid2
Cdh12
Olfr107
Abhd6
Rtn1
Onecut3
Abi2
Mnx1
Lmo3
Thrb
Ptpn12
Lrrn2
Gm4791
Vmn2r82
Prkab1
Ccdc107
Fam43a
2410004B18Rik
Ypel1
Apbb2
Bmp7
Arid1b
Grpel1
Angpt2
4930503B20Rik
Grik3
Psmc6
1600014C23Rik
Taf1d
4931406C07Rik
Tmeff1
Sostdc1
Lrmp
Olfr806
Dpf2
Zfp608
Uts2b
Rps29
Krt8
Vmn2r2
Etl4
Tmem178b
Chmp1b
Spaca7
Chst7
Neil1
Nrf1
Vax1
Kcng3
Xylt2
Pla2g2d
Akap17b
Abca4
Tspan15
Olfr1282
Nemf
Usp25
Olfml1
Daam1
Alkbh5
Olfr1532-ps1
Mmrn1
Peli3
L3hypdh
Jkamp
Nhsl1
Rasl11a
Ascl1
Grm4
Kcnk2
Arxes2
Zfhx4
Homer2
Serac1
Gtf2h5
Stk32a
Cdh23
Fezf2
Fndc3b
Kcnh8
Mpi
Cd59a
Dchs2
Gm10710
Slc6a5
Olfr1286
Zkscan1
Anxa2
Cog3
Mroh1
Eml1
Pcdh1
Gpr139
Sall4
Lef1
Malt1
Pkdcc
Kirrel
Myt1l
Fgf13
Mylk
Pgrmc2
Gm4861
Cenpv
Kat2a
Hspb9
Nr4a2
Gtf3c4
Kifc3
Eef1akmt1
Sulf2
Mical2
Sytl2
Gm14325
Hesx1
Ndst1
Rragd
AI429214
Hacd3
Tbpl1
Nbdy
Kdm2b
Acadl
Ptpro
Fam227b
Dtwd1
Zfp663
Myt1
Lipm
Tmem273
Dennd4a
Dct
Neurod1
Fam13b
Gm5165
Shroom3
Aff1
Laptm4b
Timm9
2700049A03Rik
Ccpg1os
Ccpg1
Slc10a1
Hoxc10
Hopx
Pxylp1
Baz1a
Ttc32
Zfp960
Pcdh12
Hacd4
Dock10
Cdh24
Lix1
Cyyr1
Aadacl2fm1
Cdc42ep3
Hmga1b
Hmga1
Ankrd29
Cbx5
Cep350
Fbxo32
Kcnt2
Onecut1
Coro2a
Tnip3
Mical3
Rasip1
Izumo1
Kctd9
Cdca2
Ranbp9
Filip1
Shroom4
Smco4
Enox1
Tmem131l
Taf12
Rbm47
Fam241a
Pgpep1l
Htr3a
Mobp
Nars
Fzd7
Ppia
Zfp451
Cldn3
Kcnj16
Bmp5
Nnt
Naif1
Irgm2
Prkcq
Oit1
Sem1
Pfkp
Esr1
Zfp598
Mrpl48
Prkdc
BC052040
Spx
Stk33
Nol4
Elmo2
Mrgprd
Arhgef33
Slc10a4
Zadh2
Tshz1
Tagln3
Mamdc2
Gm5820
Pakap
Atp2b1
Nutm1
Nop10
Lrrc4c
Lima1
Adtrp
Ubqln4
Lamtor2
Myo1e
Sh3glb2
Miga2
Zcchc24
Myl1
Snap25
Hey2
Pag1
Gja5
Ifnb1
Ppp2r1b
Ror1
Fech
Tmco5
Atp6v0a1
Arhgap36
Vmn2r5
Actbl2
Slc39a10
Ddx19b
Celf4
Ccdc171
Raet1d
Ankrd50
Sash1
Ermn
Acbd5
Baz2b
Ext1
Tmcc2
Irx5
Tti2
Morc1
Psap
Tent5c
Gm51425
Hadh
Sec61g
Il6st
Zfp831
Cilp
Pclo
Map3k14
Nfatc4
Knl1
Irf4
Actn4
Kcnn2
Olfr492
Mup4
Cyp2j12
Tent5a
Snrpc
Smu1
Oasl1
Negr1
Pop4
Cfap54
Csf2ra
Slc20a1
Cpne3
Esrrb
Lama2
Rorb
Pdlim3
Pdlim1
Id3
Morf4l1b
Bsx
Ntn1
Tm4sf4
Tmem30c
Cybb
Phc2
Gm14410
Lrrc57
Haus2
Tpgs2
Rab27a
Pxn
Crppa
Gnat2
Arid5b
Cep112
Myo10
Kifc1
Lims1
Arf2
Gm38396
Gnas
Ldlr
Cyth1
Trex1
Shisa5
Atp5g2
Commd4
Trafd1
Nms
Wdcp
Fkbp1b
Slc35f3
Vgll1
Samsn1
Gcgr
Rxrg
Veph1
Zfp217
Abracl
Chrna4
Acat3
Sox5
Rgmb
Nol4l
Enc1
Creb3l1
Clcn4
Nr6a1
Tnks2
Cast
Dipk1c
Dusp23
Alk
Exosc9
Olfr60
Prtg
Acp6
Irs4
Ferd3l
Mat2a
Pir
Nkx2-9
Npm2
Lsm14a
Arid3b
Cdk14
B3gnt7
Tamm41
Lama1
Raph1
Hapln1
Add1
Pgghg
Vmn2r4
Arhgap12
Mthfd2
Ifna13
Sfi1
Ppp6c
Gm11437
Arap1
Tsc22d1
Arsi
Scml4
Gatad1
Ubiad1
Mtor
Zfp869
Ppfia4
Gpr62
Erg
Sh2d4a
Pbld2
Hnrnph3
Tmem47
Sox4
Sohlh2
Srrm3
Lpar6
Tjp2
Cdca7
Hmcn1
Ppp2r3a
Ptprz1
a
Gpr137
Bad
Rnase9
Gm17660
Kitl
Lig3
Mbp
Ppp6r3
Polr2m
Marchf9
Cdk4
Impdh2
Creb5
Wnt7a
Arhgef26
Pabpc2
Foxp1
Fgd4
Ccnq
Tle1
Gja1
Unc13b
Fbxo31
Zfp991
Ttc30b
Ptpn3
Dll1
Rnase4
Ang
Klf6
Asrgl1
Galr3
Zfp534
Cdh6
Cyth3
Kdm1a
Zfp97
Qrich1
Cdh20
Prph
Qser1
Rbm27
F2rl1
Cyp7a1
Gm51573
Tmem202
Med25
Fuz
Sgo2a
Astn2
Ppp3ca
Atp1a1
Rps10
Sptlc2
1110032F04Rik
Riok3
Lats2
Asf1b
Pde4b
Arid1a
Xkr5
Rwdd1
Gm3667
Ing3
Ppp1r2
Tmem67
Rbm12b2
Adgra2
Smad2
Nckap5
Ap1ar
Ric3
Znrf4
Rere
Clec1a
Nfkbil1
Atp6v1g2
Nfe2l3
Kcnj2
Foxd3
Dip2b
Snw1
Nlrp10
Eif3f
Msantd4
Porcn
Rce1
Cibar2
Map7
Nefm
Mlkl
Fzd8
Zfp931
Rab5b
Nkx1-1
Incenp
Zfp507
Zfp473
Vrk3
Zfp980
Cemip2
Mettl8
Dcaf17
Akr1b3
Fam222b
Tra2a
Trhde
Aldoart2
Zfp985
Dynll2
Atxn1
Pcnx
Olfr1046
Gm7244
Iqschfp
Iqcj
Gm6712
Sdk2
Cep120
Th
Gpr1
Herc6
Fbxo4
Ankfn1
Tbr1
Tmem209
Ssmem1
Dyrk3
Rac1
St8sia4
Emb
Zfp260
Efna5
Xrcc5
Otoa
Frat2
Ppic
Zfyve26
Rad51b
Zfp667
Evpl
Msh2
Zfp280b
Tcf7l2
Jagn1
Bcor
D1Pas1
Cpd
Raet1e
Raet1c
Raet1b
Myo1b
Zbtb2
Vmn2r102
Bnc2
2210418O10Rik
Spns1
Ints4
Ccng1
Slco4c1
Mc4r
Arhgef6
Nck2
Rcor3
Dstn
Syt16
Ptprk
Insyn2a
Slc22a17
Btla
Zbtb18
Sgtb
Nln
Itgb1
Trim2
Dclk2
Smarca5
Thsd7a
Lamtor5
Zfp715
Mrpl45
Chn1
Dpysl3
Phyh
Zc3h4
Jam2
Gnai1
Zfp93
Pknox2
Hjurp
A730008H23Rik
Xrcc6
Desi1
Cnpy1
Rabepk
Zfp423
Fzd10
Fbxw2
Ablim1
Hhip
Lipg
Tnfrsf11b
Ilf2
Myo3b
Slc25a35
Rangrf
Selenos
Pak2
Spock3
Cdr2
Mfsd13b
Plcl2
Arap2
B4galt5
Nup93
Ckap2
Ankrd13b
Git1
Zeb2
Otol1
Osgin2
Dusp4
Zranb2
Zcrb1
Pphln1
Cipc
Gm6710
Gm14391
Myl12a
Prkaa1
Zfp524
Fiz1
Cenpb
Amt
Fgf15
Lurap1l
Fap
Elavl4
Rdm1
Ttc23
Trub1
Thg1l
4930583I09Rik
Fam161a
Gm29797
G3bp2
Trhr
Pou2f1
Bcar3
Pitpnm1
Vmn2r24
H3f3a
Slc9a4
Zfp641
Shroom2
Igf2
Tmem107
Zfp990
Zfp763
Jmjd1c
Sirt4
Gdf5
Qrfpr
Slc25a40
Dbf4
Wee2
Phc1
Dnajb8
Zbtb8a
Angpt1
Dennd11
Ttll3
Hmgxb4
Onecut2
Ntn4
Crybg3
Oser1
Fgf1
Zfp3
Aen
Rgs8
Sms
Arhgap33
Trp53bp1
Prkar2b
Gabrg2
Chd7
Myef2
Wwox
Ankrd36
Sctr
Pde7b
Prkab2
Gpm6b
Bhlhe22
Slc7a7
Tbc1d23
Zdhhc16
Exosc1
D7Ertd443e
Epn2
Ssu72
Ust
Plekha1
Ackr1
Saxo2
Efl1
Atp8a1
Plekhm1
Kdm3b
Gm8165
Taar7b
Vnn1
Apbb1
Mest
Ppp1r17
Bdnf
Fzd5
Mrap
Adar
Sec24b
Rps19
Myh3
Kcnh2
Mrps25
Sv2a
2510009E07Rik
Msi1
Fbln1
Pax6
Zfp707
Aqr
Col11a1
Ank3
Zfp91
Lpxn
Tcf7l1
Prpf40a
Arl6ip6
Atp8b4
Serpinb2
Arid4a
Mro
Fgfr2
Cul2
Mrps33
Skap1
Tcf15
Cacna1c
Slc25a25
Ttc30a2
Mad1l1
Bcas1
Usp44
Tle3
Nt5e
Mfng
Optn
Gramd1b
Pop5
Chmp6
Uqcc3
Lbhd1
Toporsl
Lingo3
Klhl29
Cotl1
Ogn
Pcbd2
Arhgap28
C2cd5
Cfap43
Arhgef2
Gm17026
Arhgef18
Piwil1
Ebf2
Ilvbl
Cbx1
Insyn2b
Nrep
Rln3
Il27ra
Gspt1
Mbtps2
Usp15
Tenm2
Mrvi1
Mpzl1
Erbb4
Lhx5
Ehmt2
Gm17124
Synpo
Ubr5
Inip
Mgat4a
Smug1
Ppp3r1
Dnaic2
Micu2
Mrpl22
Gemin5
Olfr62
Gm14326
BC048507
Armh4
Lrig3
Gm11837
Gcn1
Tyr
Lgals12
Gm9508
Neurod4
Nt5c3b
Klhl10
Scg2
Ucma
Csta3
Barhl1
Irx4
Skil
Wdr17
Cyp2b10
Megf9
Ubap1l
Wbp2nl
Tbc1d9
Upf3a
Dpp10
Atxn7l1
Slc9a9
Iapp
Erich3
Mrps28
Gng3
Bscl2
Pcbp4
Abhd14b
Rexo1
Sacs
Zfp984
Spidr
Ptms
Cd200
Slc16a7
Inpp4b
Lrp2bp
Ankrd6
Eif2d
Krt222
Ush2a
Npffr2
Crx
Taar6
Txndc2
Ddx6
Amacr
Zfp462
Zfp979
Ptpn14
Scd3
Lefty2
4930474N05Rik
Lag3
Ppp2r2b
Otx2
Accsl
Mageh1
Smad5
Armc3
Chpt1
Zfp987
Cldn14
Zc3h12c
Lrrc10b
B3galt5
Asb4
Radil
Ncoa4
Zmym2
Olfr1240
Trim24
Tac4
Tmc5
Elavl2
Col3a1
Colec12
Acaa2
Pex5l
Sox2
Lingo2
Vangl2
Tcaf1
Jup
Rps12
Zic3
A1bg
Gm1113
Gpr141
Col12a1
Fam110b
Skor1
Tmem30a
Gm3411
Acyp1
Gm3752
Caly
Tyro3
Rdh11
Gm3173
Optc
Tmem37
Gfra3
Gm2956
Pgm5
Otud1
Bms1
St6gal1
Stk38
Epb41l3
Ptpn9
Lmx1b
Gm4907
Prps1
Abr