ChIP-Atlas: Target genes

Potential target genes for Lhx3

Query protein: Lhx3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2388070 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Lhx3's Target genes

◢ Lhx3: Average

◢ SRX1706941: mESCs, differentiated

◢ SRX1706942: mESCs, differentiated

◢ SRX1706944: mESCs, differentiated

◢ SRX1706945: mESCs, differentiated

◢ SRX1706946: mESCs, differentiated

◢ SRX1706947: mESCs, differentiated

◢ SRX1706952: mESCs, differentiated

◢ SRX1706953: mESCs, differentiated

◢ SRX1706958: mESCs, differentiated

◢ SRX1706959: mESCs, differentiated

◢ SRX1706965: mESCs, differentiated

◢ SRX1706966: mESCs, differentiated

◢ SRX1706967: mESCs, differentiated

◢ SRX1706968: mESCs, differentiated

◢ SRX1706974: mESCs, differentiated

◢ SRX1706975: mESCs, differentiated

◢ SRX1706976: mESCs, differentiated

◢ SRX2388060: mESCs, differentiated

◢ SRX2388063: mESCs, differentiated

◢ SRX2388064: mESCs, differentiated

◢ SRX2388067: mESCs, differentiated

◢ SRX2388068: mESCs, differentiated

◢ SRX2388069: mESCs, differentiated

◣ SRX2388070: mESCs, differentiated

◢ SRX2388071: mESCs, differentiated

◢ SRX2388072: mESCs, differentiated

◢ SRX2388074: mESCs, differentiated

◢ Lhx3: STRING

Kank1
Snx18
Cars
Nfe2
Pgk1
Ascl1
Cldn34d
Atg4c
Zfp879
Gas2
Fancf
Onecut2
Gm4791
Kdm4c
Lmo3
Sema6d
Frmd4a
Kpna1
Sipa1l1
Cdk19
Abhd6
Mcf2
Rab38
Pakap
Spp2
Nrp1
Krt8
Ubxn10
Pla2g2c
Sema5b
Daam1
Nt5c2
Ina
Nptx2
Lmo1
Usp25
Pmfbp1
Nnt
Lrrc52
Mid2
Dock10
Col6a6
Pla2g2d
Akap17b
Mpi
Nhsl1
Uts2b
Il31ra
Olfr806
Neurod1
Tmem30c
Sspn
Olfr1046
Sepsecs
Atp2b2
Psmc6
Mpp4
Abracl
Ifnb1
Rab3gap1
Snca
Zfp516
St18
Arid1b
Enox1
2410004B18Rik
Ntn1
Lmo4
Ypel1
Enc1
Bambi
Dennd11
Pcdh1
Gnat2
Mnx1
Esr1
Kcng3
Hoxa1
Saxo2
Efl1
Ebf2
Fezf2
Ubqln4
Lamtor2
Rnase12
Rnase11
Slc25a35
Rangrf
Tent5c
Plekhh3
Cntnap1
Ccr10
Pgpep1l
Edar
Aadacl2fm1
Prkab1
Gabrg2
Gm5820
Sulf2
Raet1d
Gdf5
Olfr1286
St3gal1
Neil1
Morc1
Celf4
Unc5c
Tnfrsf19
Lsm14a
Ddx19b
Cldn3
Chst7
Gcgr
Bin2
Rtn1
Slc17a8
Epn2
Lrrtm4
Serpinb2
Kifc3
Tbpl1
Xylt2
L3hypdh
Jkamp
Raet1e
Raet1c
Raet1b
Ndufaf4
Rab27a
1600014C23Rik
Hoxc10
Coro2a
Ttc32
Apbb2
Htr3a
Tshz2
Zkscan1
Slc6a5
Chmp1b
Ttll3
Gja5
Tmco5
Thrb
Hmga1b
Hmga1
Lrrn2
Wwox
Lrmp
Zfp608
Bcas2
Cfap36
Lef1
Myh3
Eml1
Nfe2l3
Vmn2r82
Sytl2
Acbd5
Sdk2
Mrap
Morf4l1b
Phc2
Rasl11a
Tspan15
Oasl1
Ccdc107
Rabepk
Pxylp1
Qrfpr
Sostdc1
Nutm1
Nop10
Nckap5
Aen
Grwd1
Fam43a
Fam171b
Chrna4
Pcbd2
Timm9
2700049A03Rik
Slc35f3
Cacng4
Tshr
Lima1
Trp53bp1
Tagln3
Pkdcc
Angpt1
Knl1
Gm4861
Csf2ra
Dll1
Ccr6
Etl4
Olfr107
Kcnh8
Foxd3
Cdca7
Ssu72
Lix1
Zfp217
Angpt2
Alkbh5
Zeb2
Cbx5
Wee2
Ifna13
Ccnq
Ttc34
Ebf3
Homer2
Foxp1
Tmeff1
Atp5g2
Bhlhe22
Esrrb
Galr3
Pde7b
Myt1l
Irgm2
Apbb1
Spcs3
Tmcc2
Ctbp2
Crybg3
Ust
Fgfr2
Olfr846
Gspt1
Lhx5
Bsx
AI429214
Zbtb8a
Nkx3-2
Onecut3
Gpr137
Bad
Cybb
Oser1
Adamts18
Dhrs7
Kctd9
Cdca2
Dip2b
Ttc23
Vmn2r2
Rnf182
Ndst1
Ppia
Eef1akmt1
a
Pgrmc2
Rbm47
Vmn2r102
Gcn1
Zfp423
Fndc3b
Iqschfp
Iqcj
Foxa2
Slc44a1
Trub1
Dennd4a
Ptpn12
Smad5
Dipk1c
Aebp2
Grpel1
Cyp2j12
Ntn4
Mrps33
Pag1
Atp8b4
Kirrel
Myo1b
Pias1
Rcor3
Cdh12
4930503B20Rik
Peli3
Vnn1
Ank3
Mbp
Slc10a4
Lig3
Plekhm1
Cemip2
Sfi1
Sncaip
Taf12
Gm5165
Hadh
Nrf1
Stk33
Gm21119
Gm15319
Uncx
Ubr5
Sgo2a
Kcnn2
Gpr139
Tmem156
Baz2b
Ush2a
Copz1
Taf1d
4931406C07Rik
Olfr492
Sash1
Zcrb1
Pphln1
Rbm27
Kat2a
Hspb9
Slc25a40
Dbf4
Znrf4
Cdh23
Ccpg1os
Ccpg1
Phc1
Trex1
Shisa5
Dnajb8
Pxn
Dpf2
Pcdh12
Hmgxb4
Abca4
Lrrc4c
Creb3l1
Zfp703
Atp6v0a1
Olfml1
Arhgef33
Grm4
Arxes2
Pdlim3
Tjp2
Dusp23
Arhgap36
Gm51425
Btla
Fgf1
Shroom4
Zfp3
Ror1
Vax1
Spaca7
Rgs8
Kdm2b
Mup4
Hacd4
Ptprz1
Sms
Arhgap33
Cilp
Cfap54
Gm14410
Raph1
Gm14325
Olfr1282
Acadl
Nol4
Ubiad1
Mtor
Prkar2b
Chd7
Laptm4b
Ext1
Tm4sf4
Emb
Myef2
Fgd4
Ankrd36
Zfp960
Zfp715
Pdlim1
Olfr60
Serac1
Gtf2h5
Mylk
Tmem178b
Sctr
Slc10a1
Abi2
Gm7244
Nfkbil1
Atp6v1g2
Ldlr
Lats2
Wdcp
Fkbp1b
Mamdc2
Prkab2
Sh3glb2
Miga2
F2rl1
Gpm6b
Hopx
Xrcc6
Desi1
Smco4
Taar9
Slc7a7
Zfhx4
Tbc1d23
Cipc
Ankrd50
Trim2
Zdhhc16
Exosc1
Tnip3
D7Ertd443e
Rnase4
Ang
Dchs2
Arap1
Id3
Plekha1
Ackr1
Lama2
Dct
Asf1b
Zcchc24
Tnks2
Atp8a1
Nr6a1
Kdm3b
Zfp663
Gm8165
Cnpy1
Psap
Taar7b
Spx
4930467E23Rik
Fbxo31
Mest
Efna5
Nfatc4
Zfp931
Ppp1r17
Sall4
Hapln1
Bdnf
Fzd5
Tamm41
Adtrp
Adar
Cacng1
Zfp869
Myt1
Fech
Rce1
Zfp260
Cyyr1
Cyth3
Sec24b
Rps19
Cdh20
Cdh24
Kcnh2
Cd59a
Filip1
Gm6710
Gm14391
Klf6
Prkaa1
Ppp3ca
Mrps25
Sv2a
2510009E07Rik
Msi1
Akr1b3
Fbln1
Pax6
Tbr1
Zfp707
Aqr
Zbtb18
Col11a1
Scml4
Zfp91
Lpxn
Tcf7l1
Kcnj16
Prpf40a
Arl6ip6
Nup93
Otol1
Arid4a
Mro
Tent5a
Aff1
Tmem107
Cul2
Skap1
Slc39a10
Erg
Olfr108
Kdm1a
Sem1
Tcf15
Cacna1c
Slc25a25
Baz1a
Ttc30a2
Mobp
Hacd3
Ptpro
Mad1l1
Bcas1
Usp44
Tle3
Rxrg
Nt5e
Hesx1
Mfng
Optn
Gramd1b
Gm38396
Pop5
Arid3b
Chmp6
Uqcc3
Lbhd1
Toporsl
Lingo3
Klhl29
Cotl1
Ogn
Lama1
Arhgap28
Zfp97
Riok3
C2cd5
Cfap43
Cibar2
Arhgef2
Gm29797
Gm17026
Fbxo32
Fam13b
Vmn2r5
Prtg
Lipm
Irx5
Arhgef18
Piwil1
Ilvbl
Arid1a
Bnc2
Phactr3
Cbx1
Rorb
Gnai1
Cyth1
Zfyve26
Rad51b
Insyn2b
Nrep
Rln3
Il27ra
Lpar6
Mbtps2
Vmn2r24
Nr4a2
Usp15
Sh2d4a
Tenm2
Trafd1
Mrvi1
Mpzl1
Erbb4
Kitl
Ehmt2
Muc15
Gm17124
Synpo
Jmjd1c
Inip
Mgat4a
Zfp991
Smug1
Ppp3r1
Impdh2
Dnaic2
Tti2
Mical2
Mical3
Micu2
Myo1e
Pitpnm1
Fgf15
Mrpl22
Gemin5
Olfr62
Gm14326
BC048507
Armh4
Lrig3
Gm11837
Ranbp9
Tyr
Lgals12
Gm9508
Neurod4
Nt5c3b
Klhl10
Atp1a1
Scg2
Rps10
Fam222b
Ucma
Csta3
Barhl1
Irx4
Ppfia4
Cyp7a1
Skil
Negr1
Wdr17
Cyp2b10
Ttc30b
Cep350
Megf9
Snw1
Hmcn1
Stk32a
Actn4
Ubap1l
Wbp2nl
Mrpl45
Tbc1d9
Add1
Myl12a
Upf3a
Dpp10
Atxn7l1
Fzd8
Slc9a9
2210418O10Rik
Iapp
Erich3
Ppp1r2
Mrps28
Gng3
Bscl2
Zfp534
Pcbp4
Abhd14b
Vtcn1
Rexo1
Sacs
Zfp984
Dstn
Myo10
Spidr
Ptms
Map7
Cd200
Slc16a7
Inpp4b
Myl1
Zfp473
Vrk3
Lrp2bp
Ankrd6
Eif2d
Bcar3
Krt222
Arap2
Npffr2
Cdc42ep3
Crx
Taar6
Jagn1
Xrcc5
Txndc2
Zbtb2
Tmem202
Vmn2r4
Ddx6
Amacr
Zfp462
Zfp979
Tra2a
Ptpn14
Pde4b
Olfr1532-ps1
Scd3
Lefty2
Pclo
4930474N05Rik
Lag3
Ppp2r2b
Otx2
Fbxw2
Accsl
Mageh1
Ablim1
Gja1
Commd4
Gnas
Rnase9
Kcnk2
Armc3
Chpt1
Gm6712
Zfp987
Cldn14
Rdm1
Zc3h12c
Ppp6r3
Osgin2
Lrrc10b
Sohlh2
B3galt5
Asb4
Radil
Ncoa4
Acp6
Zmym2
Acat3
Elmo2
Olfr1240
Trim24
Tac4
Ccdc171
Tmc5
Elavl2
Col3a1
Chn1
Prph
Xkr5
Colec12
Alk
Acaa2
Pex5l
Shroom3
Sox2
Tsc22d1
Lingo2
Vangl2
Tcaf1
Fzd10
Jup
Arid5b
Rps12
Kifc1
Zic3
Rragd
A1bg
Gm1113
Gpr141
Col12a1
Fam110b
Skor1
Bcor
Tmem30a
Gm3411
Acyp1
Gm3752
Cep120
Caly
Tyro3
Rdh11
Gm3173
Optc
Tmem37
Gfra3
Gm2956
Sec61g
Pgm5
Hey2
Otud1
Bms1
Cenpv
St6gal1
Stk38
Epb41l3
Ptpn9
Lmx1b
Exosc9
Gm4907
Prps1
Atxn1
Abr
Rfx4
Th
Il18rap
Hhip
H1f0
Gcat
Ndufa4l2
Rab5a
Vgll1
Cast
Srp19
Apobec2
Irs4
Sptlc2
Ank2
Rag1
Acvr2a
Zfp985
Zfp382
Drd2
Vkorc1l1
Lhx9
Otx1
Alpk3
Has2
Pipox
Pik3ap1
Grik3
Meox1
Fbxo7
Asic1
Phlpp1
Smad2
Asic5
Por
Myb
Spns1
Kcnv2
Pop4
Plcd3
Acbd4
Spock3
Cog3
Ints4
Clasp2
Tctex1d1
Fkbp5
Zbtb11
Grap2
Pdha1
Myl12b
Sh2d7
Smndc1
Gm3696
Neurog2
Smarcal1
Atp2c1
Thsd7a
Sox5
Otoa
Rraga
Gpr1
Nbdy
Plekhg2
Atp6v1e2
Unc13b
Nxph4
Zfpm1
Zfp385b
Zmat4
Fabp7
Hspa8
Gatad1
Usp1
Lsm1
Bag4
Lrpap1
Lrrc30
Cep112
Gtdc1
2610042L04Rik
Trio
Ncoa3
Gm10406
Syt2
Errfi1
Clcn4
Rgmb
Rnf43
Phyh
Tmem273
Zc3h4
Trhde
Pcnx
Tdg
Drg1
Cldn10
Cga
Dusp4
Runx1t1
Rex2
Rbfox2
Tcf12
Gipc2
Mroh1
Creb5
Lims1
H3c11
H2bc22
H2ac22
Sirt4
Frem1
Mov10l1
Mlc1
Synpr
Nemf
Fam76b
Cep57
Zfp980
Nmnat3
Lipg
Tfeb
Crppa
Cd300lg
Ifitm2
Traf3ip1
H2-T23
Selenos
Hmx1
Acpp
Ccng1
Ccn2
Foxb1
Gm3739
Tcl1b3
Mlxip
B4galt5
Slc25a19
Cd36
Pkmyt1
Fap
Mcur1
Naa40
Ccdc88c
Cry1
Lamc1
Sulf1
Pak2
Rnf38
Mcub
Gmnn
Eya1
Agtr2
Acvr1c
Med25
Fuz
Arhgef28
Nars
Efnb2
Reep3
Rab5b
Thg1l
Prkcq
Sox4
Ermn
Abcd3
Ovca2
Pde11a
Gm10710
Dll4
Itprid1
Rwdd1
Tcerg1
Rsph4a
Adgrg7
Tesk2
Ppm1e
Gm20594
Anxa2
Agpat3
Slc48a1
Rnf2
Slc19a3
Pbld2
Hnrnph3
Tmem125
Wdr95
Nbeal2
Ccdc12
Rbms1
Crybb3
Sall1
Nkx3-1
Hoxb2
Rtraf
Tex2
Slc20a1
Tmem74
Myoz1
Zranb1
Cacna1i
Zfp212
Pdgfc
Ptpn3
Gpx1
Cdk14
Tdrd3
Prkag2
Gnai3
Tmem209
Ssmem1