ChIP-Atlas: Target genes

Potential target genes for Lhx3

Query protein: Lhx3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1706965 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Lhx3's Target genes

◢ Lhx3: Average

◢ SRX1706941: mESCs, differentiated

◢ SRX1706942: mESCs, differentiated

◢ SRX1706944: mESCs, differentiated

◢ SRX1706945: mESCs, differentiated

◢ SRX1706946: mESCs, differentiated

◢ SRX1706947: mESCs, differentiated

◢ SRX1706952: mESCs, differentiated

◢ SRX1706953: mESCs, differentiated

◢ SRX1706958: mESCs, differentiated

◢ SRX1706959: mESCs, differentiated

◣ SRX1706965: mESCs, differentiated

◢ SRX1706966: mESCs, differentiated

◢ SRX1706967: mESCs, differentiated

◢ SRX1706968: mESCs, differentiated

◢ SRX1706974: mESCs, differentiated

◢ SRX1706975: mESCs, differentiated

◢ SRX1706976: mESCs, differentiated

◢ SRX2388060: mESCs, differentiated

◢ SRX2388063: mESCs, differentiated

◢ SRX2388064: mESCs, differentiated

◢ SRX2388067: mESCs, differentiated

◢ SRX2388068: mESCs, differentiated

◢ SRX2388069: mESCs, differentiated

◢ SRX2388070: mESCs, differentiated

◢ SRX2388071: mESCs, differentiated

◢ SRX2388072: mESCs, differentiated

◢ SRX2388074: mESCs, differentiated

◢ Lhx3: STRING

Kank1
Nfe2
Snx18
Zfp879
Cars
Ubxn10
Pla2g2c
Sipa1l1
Atg4c
Nrp1
Frmd4a
Mcf2
Krt8
Gm4791
Rab38
Cdk19
Kcng3
Psmc6
Spp2
Akap17b
Cfap36
Rnase12
Rnase11
Pmfbp1
Sostdc1
Prkab1
Pakap
Sema5b
Slc17a8
Nptx2
Nhsl1
Tspan15
Sepsecs
Kdm4c
Zkscan1
Zfp516
Tagln3
Atp2b2
Fndc3b
Pgpep1l
Lrrc52
Lmo4
Olfr1286
Ypel1
Zfp608
Myt1l
Sema6d
Gm5820
Coro2a
Bcas2
Kcnn2
Gnat2
Cldn3
Lrmp
Lsm14a
Neurod1
Usp25
Copz1
Mpp4
Nrf1
Ndufaf4
Tmeff1
Grpel1
Vmn2r2
Tnfrsf19
Fam43a
Gja5
Timm9
2700049A03Rik
Rasl11a
St3gal1
Olfr1282
Daam1
Hmga1b
Hmga1
Olfr492
Hoxc10
Uts2b
St18
Ddx19b
Mpi
Gas2
Fancf
Arhgap33
Enc1
Col6a6
Lrrtm4
Sytl2
Morc1
Peli3
Edar
Fam171b
Gm7244
Olfml1
Bin2
Nt5c2
Ina
Pcdh1
Chmp1b
Tmco5
Cldn34d
Fgf1
Cbx5
Spaca7
Kat2a
Hspb9
Eml1
Snca
Angpt2
Lrrn2
Angpt1
Ndst1
Cdh23
Rab27a
Dock10
Pcdh12
Creb3l1
Mylk
Kifc3
1600014C23Rik
Mid2
Taf1d
4931406C07Rik
Arap1
2410004B18Rik
Olfr107
Abca4
Gdf5
Atp5g2
Chst7
Ntn1
Rbm47
Olfr1046
Dnajb8
Prkab2
Tle3
Tnip3
Bsx
Pde7b
Atp6v0a1
Rab3gap1
Lmo3
Fezf2
Fbln1
Cfap43
Pkdcc
Ppia
Upf3a
Nnt
Plekhh3
Cntnap1
Ccr10
Mnx1
Gpr139
Zcrb1
Pphln1
Ifnb1
Lef1
Cdh12
Lix1
Ubiad1
Mtor
Fbxo32
Raph1
Ntn4
Qrfpr
Arxes2
4930503B20Rik
Mrap
Wee2
Tmem30c
Arid1b
Gabrg2
Knl1
Cybb
Ust
Lrrc4c
Hoxa1
Zfp707
Hmgxb4
Ptpn12
Ccpg1os
Ccpg1
Toporsl
Dipk1c
Tmcc2
L3hypdh
Jkamp
Rgs8
Tmem178b
Dennd11
Chd7
Tmem30a
AI429214
Mrps33
Apbb2
Gpm6b
Olfr60
Tbc1d23
Zfp663
Xrcc6
Desi1
Irgm2
Aen
Sctr
Ext1
Abi2
Crybg3
Atp1a1
Trex1
Shisa5
Btla
Gm4861
Xrcc5
Tshz2
Cypt3
Acbd5
Adtrp
Arhgap36
Dpf2
Pgk1
Dll1
Kcnj16
Alkbh5
Tbpl1
Gramd1b
Cyp2j12
Armh4
Pcbd2
Htr3a
Trub1
Zfp703
Ttll3
Cipc
Esrrb
BC048507
Mup4
Ptprz1
Bhlhe22
Micu2
Rtn1
Zfp217
Mrpl22
Gemin5
Lima1
Vax1
Bnc2
Neil1
Tjp2
Mrps25
Zfp91
Lpxn
Atp8b4
Bambi
Arid5b
Hey2
Rbm27
Trp53bp1
Laptm4b
Fam13b
Fech
Taar6
St6gal1
Gm51425
Ppp1r17
Scg2
Lmo1
Ttc30b
Kdm3b
Vnn1
Vmn2r4
Lpar6
Znrf4
Dusp23
Sms
Ccdc107
Map7
Celf4
Myt1
Pxn
Fgd4
Eef1akmt1
Hapln1
Klf6
Slc35f3
Plekhg2
Mamdc2
Kcnh2
Gm4907
Mgat4a
Slc25a40
Dbf4
Arhgef33
Zfp3
Zfp715
Serac1
Gtf2h5
Prkar2b
Mrvi1
Jagn1
Scd3
Acyp1
Nr6a1
Ovca2
Ankrd50
Hadh
Zfhx4
D7Ertd443e
Otol1
Asic5
Plekha1
Zfp260
Baz1a
Oser1
Gm21119
Gm15319
Pitpnm1
Irx4
Myo1b
Adar
a
Cast
Slc10a4
Zbtb2
Grm4
Shroom4
Cacng1
Tti2
Acadl
Taar7b
Rexo1
Ldlr
Trim2
Foxd3
Cyp7a1
Zcchc24
Rce1
Cibar2
Jmjd1c
Ttc32
Neurod4
Lrrc30
Cilp
Phc2
Apbb1
Akr1b3
Slc16a7
Gfi1
Pxylp1
Mobp
Optn
Trafd1
Morf4l1b
Cyyr1
Atxn7l1
B3galt5
Wwox
Nt5c3b
Klhl10
Ccr6
Uqcc3
Lbhd1
Smco4
Rnase4
Ang
Gm8165
Scml4
Erg
Gm38396
Nup93
Etl4
Slc10a1
Nfkbil1
Atp6v1g2
Nol4
Tnks2
Mbtps2
Gm5165
Insyn2b
Kdm2b
Ssu72
Ubr5
Iapp
Gng3
Bscl2
Olfr806
Hopx
Gm9508
Tmc5
Tcf7l1
Lrig3
Gm1113
Il18rap
Spcs3
Taf12
Lgals12
Pdlim3
Dct
Sv2a
Wdr17
Vmn2r5
Tbc1d9
Plekhm1
Atp8a1
Slc9a9
Fam110b
Atxn1
Foxb1
Olfr735
Hacd4
Arid3b
C2cd5
Ucma
Tra2a
Baz2b
Tent5a
Synpo
Ppfia4
Tm4sf4
Bdnf
Ogn
Riok3
Usp15
Cdca7
Kctd9
Cdca2
2510009E07Rik
Zbtb11
Peli2
Nek11
Aste1
Cfap54
4930467E23Rik
Nrep
Myef2
Epn2
Lama2
Fbxo31
Kitl
Rps19
Chpt1
Taar9
Serpinb2
Sohlh2
Col11a1
Lefty2
Dennd4a
Pdlim1
Psap
Msi1
Ehmt2
Acvr1c
Tbce
H3c4
H2bc8
H2bc7
H2ac8
H2ac7
Nfatc4
Gm29797
Arid1a
Ank2
Lrrtm2
Abhd6
Ankrd36
Sh3glb2
Miga2
Sall4
Usp44
Ubap1l
Tafa1
Ptpro
Inpp4b
Tmem107
Smndc1
Vmn2r102
Naa40
Nudt5
Cdc123
H1f0
Gcat
Sash1
Ror1
Zfyve26
Rad51b
Add1
Asf1b
Zfp869
Tcf15
Iqschfp
Iqcj
Fzd10
Mical3
Pak2
Sugct
Mplkip
Slc44a3
Olfr108
Krt222
Prpf40a
Arl6ip6
Drd2
Megf9
Zmym2
Tmem273
Lmo7
Prkaa1
Alk
Gm3696
Zc3h10
Rpl41
Sulf2
Zfp960
F2rl1
Saxo2
Efl1
Piwil1
Dstn
Elmo2
Serpine3
Ppargc1b
Gxylt2
Tshr
Efna5
Ppp3ca
Crx
Tcl1b3
Vkorc1l1
Qrich1
Fgf12
Zdhhc16
Exosc1
Rxrg
Radil
Fam32a
Rnf165
Kpna1
Tyro3
Rbm20
Orc5
Zeb2
Kcnh8
Abracl
Armc3
Asic1
Otoa
Tex14
Lama1
Myl1
Zfp462
Gipc2
Ptpn3
Prdm12
Gm14325
Efnb2
Slc46a3
Myh3
Slc39a10
Kdm1a
Tcaf1
Rps12
Prps1
Lipg
Card19
Enox1
Chmp6
Ppp1r2
Pcbp4
Abhd14b
Fbxw2
Axin2
Chn1
Rorb
Zc3h12c
Pop5
Ilvbl
Sh2d4a
Nt5e
Otx2
Asb4
Acp6
Kifc1
Tmem156
Psmd4
Ferd3l
Galr3
Rcor3
Cd200
Rnase9
Olfr1240
Igfbpl1
Epha1
Cnpy1
Mfng
Sirt4
Tars2
Alpk3
Pcnx
Clps
Zfp664
Ccdc92
Alcam
Tmem71
Raet1e
Raet1c
Raet1b
Erbb4
Emb
Chrna4
Aff1
Ddx6
Olfr1532-ps1
Rab5a
Fam122b
Ap1ar
Mrps28
Cdc42ep3
Slc7a7
Arhgef2
Dnaic2
Erich3
Mest
Zbtb18
Zfp473
Vrk3
Phlpp1
Fbxw7
Pi4k2a
Morn4
Pclo
Syt2
Lingo2
Skor1
Gfra3
Tctex1d1
Ncald
Cldn7
Tamm41
Ank3
Sacs
Usp1
Raet1d
Skil
Wbp2nl
C9
Unc13b
Lamc1
Pax6
Nlrp9b
Gm14410
Gspt1
Cdh6
Zbtb8a
Cyth3
Gcn1
Plcl2
Slc25a25
Abr
Frem1
Inmt
Rhoh
Ipo5
Ttc30a2
Muc15
Zfp382
Grik3
Cpt1b
Chkb
Lats2
Ppp6r3
Gpx1
Lig3
Zfp979
Ablim1
Bms1
Sgca
Tspan11
Mical2
Mov10l1
Mlc1
Armc12
Cotl1
Tnfrsf11b
Egln3
Gm11837
Pou3f1
Ush2a
Gse1
Isy1
Phc1
Rab5b
Sec61g
Arhgap12
Ehbp1
Slc20a1
Cdh20
Smad5
Wdr95
9530077C05Rik
Thsd7a
Gm6710
Gm14391
Map4
Ubqln4
Lamtor2
Zfp423
Sh2d7
Isl1
Clasp2
Ccng1
Gng7
Ppp2r2b
Il31ra
Ascl1
Sspn
Onecut2
Unc5c
Xylt2
Foxp1
Csf2ra
Olfr846
Esr1
Pla2g2d
Wdcp
Fkbp1b
Nutm1
Nop10
Slc6a5
Onecut3
Slc25a35
Rangrf
Dchs2
Oasl1
Id3
Ackr1
Ctbp2
Spx
Zfp931
Fzd5
Vmn2r82
Ebf3
Thrb
Sec24b
Tent5c
Cdh24
Cd59a
Filip1
Nfe2l3
Tbr1
Aadacl2fm1
Aqr
Ifna13
Stk33
Arid4a
Mro
Gcgr
Fgfr2
Cul2
Skap1
Sem1
Cacna1c
Hacd3
Mad1l1
Bcas1
Hesx1
Ccnq
Lingo3
Klhl29
Arhgap28
Zfp97
Gm17026
Prtg
Lipm
Irx5
Arhgef18
Ebf2
Dip2b
Phactr3
Cbx1
Gnai1
Cyth1
Rln3
Il27ra
Vmn2r24
Nr4a2
Tenm2
Rabepk
Mpzl1
Lhx5
Gm17124
Inip
Zfp991
Smug1
Ppp3r1
Homer2
Impdh2
Sfi1
Myo1e
Fgf15
Mbp
Olfr62
Gm14326
Foxa2
Ranbp9
Tyr
Rps10
Fam222b
Csta3
Barhl1
Negr1
Cyp2b10
Cep350
Snw1
Hmcn1
Stk32a
Actn4
Mrpl45
Gpr137
Bad
Myl12a
Dpp10
Fzd8
2210418O10Rik
Zfp534
Vtcn1
Zfp984
Myo10
Spidr
Ptms
Lrp2bp
Ankrd6
Eif2d
Bcar3
Arap2
Npffr2
Txndc2
Tmem202
Amacr
Ptpn14
Pde4b
4930474N05Rik
Lag3
Accsl
Mageh1
Gja1
Commd4
Gnas
Kcnk2
Gm6712
Zfp987
Cldn14
Rdm1
Osgin2
Lrrc10b
Ncoa4
Acat3
Sdk2
Trim24
Tac4
Ccdc171
Elavl2
Col3a1
Prph
Xkr5
Colec12
Acaa2
Pex5l
Shroom3
Sox2
Tsc22d1
Vangl2
Jup
Zic3
Rragd
A1bg
Gpr141
Col12a1
Bcor
Gm3411
Gm3752
Cep120
Caly
Rdh11
Gm3173
Optc
Tmem37
Gm2956
Ttc23
Pgm5
Otud1
Cenpv
Stk38
Epb41l3
Ptpn9
Lmx1b
Exosc9
Rfx4
Th
Hhip
Ndufa4l2
Vgll1
Srp19
Apobec2
Irs4
Sptlc2
Rag1
Acvr2a
Zfp985
Lhx9
Otx1
Has2
Pipox
Pik3ap1
Meox1
Fbxo7
Smad2
Por
Myb
Spns1
Kcnv2
Pop4
Plcd3
Acbd4
Spock3
Cog3
Ints4
Fkbp5
Grap2
Pdha1
Myl12b
Neurog2
Smarcal1
Atp2c1
Sox5
Grwd1
Rraga
Gpr1
Nbdy
Atp6v1e2
Nxph4
Zfpm1
Zfp385b
Zmat4
Fabp7
Hspa8
Gatad1
Cacng4
Lsm1
Bag4
Lrpap1
Cep112
Gtdc1
2610042L04Rik
Trio
Ncoa3
Gm10406
Ttc34
Errfi1
Clcn4
Rgmb
Rnf43
Phyh
Nkx3-2
Zc3h4
Trhde
Tdg
Drg1
Cldn10
Cga
Dusp4
Runx1t1
Rex2
Rbfox2
Tcf12
Mroh1
Creb5
Lims1
H3c11
H2bc22
H2ac22
Synpr
Nemf
Fam76b
Cep57
Zfp980
Nmnat3
Tfeb
Crppa
Cd300lg
Ifitm2
Traf3ip1
H2-T23
Selenos
Hmx1
Acpp
Ccn2
Gm3739
Mlxip
B4galt5
Slc25a19