ChIP-Atlas: Target genes

Potential target genes for Lhx3

Query protein: Lhx3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1706968 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Lhx3's Target genes

◢ Lhx3: Average

◢ SRX1706941: mESCs, differentiated

◢ SRX1706942: mESCs, differentiated

◢ SRX1706944: mESCs, differentiated

◢ SRX1706945: mESCs, differentiated

◢ SRX1706946: mESCs, differentiated

◢ SRX1706947: mESCs, differentiated

◢ SRX1706952: mESCs, differentiated

◢ SRX1706953: mESCs, differentiated

◢ SRX1706958: mESCs, differentiated

◢ SRX1706959: mESCs, differentiated

◢ SRX1706965: mESCs, differentiated

◢ SRX1706966: mESCs, differentiated

◢ SRX1706967: mESCs, differentiated

◣ SRX1706968: mESCs, differentiated

◢ SRX1706974: mESCs, differentiated

◢ SRX1706975: mESCs, differentiated

◢ SRX1706976: mESCs, differentiated

◢ SRX2388060: mESCs, differentiated

◢ SRX2388063: mESCs, differentiated

◢ SRX2388064: mESCs, differentiated

◢ SRX2388067: mESCs, differentiated

◢ SRX2388068: mESCs, differentiated

◢ SRX2388069: mESCs, differentiated

◢ SRX2388070: mESCs, differentiated

◢ SRX2388071: mESCs, differentiated

◢ SRX2388072: mESCs, differentiated

◢ SRX2388074: mESCs, differentiated

◢ Lhx3: STRING

Cars
Nfe2
Snx18
Kank1
Ubxn10
Pla2g2c
Mcf2
Frmd4a
Sipa1l1
Zfp879
Gm4791
Cdk19
Coro2a
Zfp516
Bin2
Zfp608
Cfap36
Lrmp
Tspan15
Spp2
Usp25
Psmc6
Pmfbp1
Tagln3
Slc17a8
Krt8
Pakap
Nrp1
Atg4c
Fam43a
Gm5820
Myt1l
Kdm4c
Sostdc1
Ypel1
Mpi
Gnat2
Lmo4
Akap17b
Pkdcc
Copz1
Grpel1
Prkab1
Olfr1286
Nptx2
Kcng3
Cldn3
Morc1
Ndufaf4
Pgpep1l
Rab38
Tmeff1
St18
Lrrc52
Rnase12
Rnase11
Sema5b
Atp2b2
Znrf4
Sema6d
Edar
Dnajb8
Daam1
Nt5c2
Ina
1600014C23Rik
Ttll3
Mpp4
Ndst1
Gja5
Zkscan1
Trex1
Shisa5
Dusp23
Pcdh1
Eml1
Taf1d
4931406C07Rik
2410004B18Rik
Rasl11a
Alkbh5
Fam171b
Lsm14a
Neurod1
Gas2
Fancf
Olfr492
Aen
Mid2
Kat2a
Hspb9
Tmem30c
Nhsl1
St3gal1
Olfml1
Snca
Gdf5
Sytl2
Sepsecs
Hmga1b
Hmga1
Angpt2
Uts2b
Hoxc10
Lmo1
Creb3l1
Enc1
Bcas2
Fndc3b
Vmn2r2
Tmco5
Col6a6
Lrrtm4
Cldn34d
Fezf2
Htr3a
Olfr1282
Timm9
2700049A03Rik
Crybg3
Dock10
Knl1
Cdh12
Gm51425
Cdh23
Rab27a
Lmo3
Pcdh12
Ntn1
Peli3
Ddx19b
Ntn4
Abca4
Rab3gap1
Cbx5
Rbm47
Lrrn2
Hopx
D7Ertd443e
Mnx1
AI429214
Gpr139
Rgs8
Lrrc4c
Fech
Gm7244
Dpf2
Nol4
Fgf1
Chmp1b
Ppia
Prkab2
Tnfrsf19
Nrf1
Cybb
Ttc30a2
Spaca7
Tnip3
Grm4
Apbb2
Olfr60
Kifc3
Zcchc24
Dll1
Zfp707
Dct
Irgm2
Chst7
Oser1
Ptprz1
Hoxa1
Neil1
Vax1
Plekhh3
Cntnap1
Ccr10
Myt1
Nnt
Olfr1046
Ifnb1
Cyp2j12
Dennd11
Uqcc3
Lbhd1
Zfp869
Pxn
Slc10a4
Arhgef33
Lix1
Dnaic2
Mamdc2
Pde7b
Arhgap36
Kcnn2
Fbxo31
Gpm6b
Bsx
Lima1
Qrfpr
Taar7b
Bambi
Atp5g2
Gm14410
Wee2
Myo1b
Synpo
Gm5165
Kpna1
Nt5c3b
Klhl10
Ubiad1
Mtor
Cilp
Etl4
Trub1
Mfng
Nrep
Arid1b
Foxp1
Riok3
Slc25a40
Dbf4
Raph1
Ust
Arhgap33
Esrrb
L3hypdh
Jkamp
Ppp1r17
Fbln1
Plekha1
Ssu72
Mrpl45
4930503B20Rik
Chd7
Efna5
Serac1
Gtf2h5
Rnase4
Ang
Acbd5
Chmp6
Zbtb8a
Mrps33
Sms
Wdcp
Fkbp1b
Cdca7
Cfap54
Zdhhc16
Exosc1
Tcf15
Arap1
Chrna4
Ank3
Lef1
Morf4l1b
Ankrd36
Bhlhe22
Xrcc6
Desi1
Epn2
Myh3
Zfp703
Tent5a
Zfp3
Prkar2b
Arhgef2
Ror1
Skap1
Plekhm1
Sv2a
Foxd3
Zfhx4
Zfp960
Asf1b
Cfap43
Ldlr
Nup93
Ccdc107
Ccr6
Ptpn12
Angpt1
Ttc32
BC048507
Zfp217
Nfkbil1
Atp6v1g2
Mup4
Tmcc2
Smco4
Ppfia4
Vmn2r4
Nfatc4
Toporsl
Ptms
Lag3
Slc25a35
Rangrf
Dipk1c
Btla
Trp53bp1
Ccnq
Sh2d4a
Kitl
Atp8b4
Ppp3ca
Il31ra
Mylk
Tcaf1
Nr6a1
Rce1
Raet1d
Sash1
Cipc
Adar
Pop5
Atp6v0a1
Msi1
Scml4
Fgd4
Map7
Slc39a10
B3galt5
Tmem178b
Neurod4
Crppa
Galr3
Gm4861
Pdlim1
Mrap
Elavl2
Sall1
Gabrg2
Tshz2
Arxes2
Arid1a
Zfp663
Hacd4
Zfp260
Tcf7l1
Rbm27
Gm1113
Slc25a25
Bnc2
Mgat4a
Celf4
Tra2a
Zic3
Taf12
Ttc30b
Atp8a1
Zmat4
Dennd4a
Optc
Hmgxb4
Zcrb1
Pphln1
Cul2
Tle3
Usp15
Erg
Phc2
Sulf2
Txndc2
Tmem202
Laptm4b
Pdlim3
Rnase9
Psap
Mest
Myo10
Zfpm1
Tcf7l2
Cd200
Zfp715
Pla2g2d
Ptpro
Impdh2
Zfp473
Vrk3
Pxylp1
Lingo2
Fbxo32
Drd2
Plekhg2
Tmem107
Rxrg
Ubap1l
Bdnf
Cdh24
Inip
F2rl1
Ankrd50
Slc10a1
Otol1
Sctr
Trim2
Fabp7
Xrcc5
Gm14325
Acadl
Gm38396
Tamm41
Gm3752
Gm2956
Ackr1
Kdm1a
Vmn2r5
Cacna1c
Lgals12
Zfp423
Cibar2
Akr1b3
Tmem273
Itprid1
Cyth1
Fam222b
Atxn7l1
Scg2
Shroom3
Pitpnm1
Gm3411
Apbb1
Mical2
Mbp
Ccpg1os
Ccpg1
Skor1
Trio
Klf6
Serpinb2
Scd3
Gm4907
Enox1
Baz2b
Ablim1
Myef2
Saxo2
Efl1
Asic1
Tnks2
Usp44
Tm4sf4
Pax6
Piwil1
Gm14326
Wdr17
Rag1
Neo1
Abr
Pik3ap1
Baz1a
Prtg
Dstn
Chpt1
Nr4a2
Acyp1
Cast
Rhoh
Cnpy1
Lingo3
Mageh1
Vangl2
Myb
Gramd1b
a
Cdc42ep3
Fam149a
Zfp97
Tjp2
Lig3
Zfp667
Kdm3b
Kcnh2
Mro
Micu2
Gnai1
Ankrd6
Ush2a
Tbc1d23
Bcas1
Add1
Zc3h12c
Col12a1
H1f0
Gcat
Tmem30a
Armc12
Rtn1
Jagn1
Hadh
Eef1akmt1
Meis3
Crx
Unc5c
Smug1
Ucma
Sall4
Filip1
Col11a1
Mobp
Shroom4
Gm21119
Gm15319
Slc16a7
Ints4
Tbpl1
Dll4
Taar6
Tcl1b3
Lpar6
Gm9508
Hmx1
Kctd9
Cdca2
Mbtps2
Lhx5
Atp2c1
Adtrp
Lrrc10b
Clip1
Trafd1
Cyyr1
Fzd10
Inava
H3c6
Gipc2
Olfr107
Abi2
Tac4
Tdg
Gm1604b
Rabepk
6430628N08Rik
Atp6v1e2
Olfr806
Psmc2
Dnajc2
Kdm2b
Arid4a
Smndc1
Wdr35
Hacd3
Pcbd2
Upf3a
Clnk
Gcn1
2610042L04Rik
Ovca2
Cd300lg
Phlpp1
Tbr1
Rorb
Rs1
Mrps25
Dusp4
Rraga
Fgf15
Gmnn
Nt5e
Sohlh2
Zfp931
Hoxb2
Slc10a6
Exosc9
Dpep1
Cacng1
Gm29797
Hapln1
Irx4
Rps12
Cyth3
Zfyve26
Rad51b
Commd4
Ndst4
Fzd8
Sox5
Gm6710
Gm14391
Rln3
Il27ra
Prps1
Mta3
Pcbp4
Abhd14b
Wdr95
C2cd5
Tas2r119
Mical3
Atp1a1
Alpk3
Rbfox2
Prdx6
Wbp2nl
Galc
Arap2
Abcd3
H3c4
H2bc8
H2bc7
H2ac8
H2ac7
Dip2b
Otx1
Nbeal2
Ccdc12
Ferd3l
Hmcn1
Th
Evi5l
Abhd6
Alk
Vnn1
Acvr2a
Frem1
Lrrtm2
Ext1
Lama2
Ubr5
Acpp
Card19
Armh4
Jup
Snw1
Inpp4b
Mlxip
Mrps28
Ubqln4
Lamtor2
Rbm25
Acat3
Ripor2
Optn
Asic5
Fam76b
Cep57
Vkorc1l1
Sh3glb2
Miga2
Ppp1r2
Ascc3
Ranbp9
Mov10l1
Mlc1
Psmd4
Ntf3
Frmpd4
Cdh20
Sh2d7
Gm10406
Tshr
4930467E23Rik
Kcnj16
Pttg1ip2
Rnf38
Rcor1
Fmc1
Gnas
Cep120
Igfbpl1
Rsu1
Dpp8
Naa40
Crybb3
Cacna1i
Gse1
Kifc1
Evpl
Crabp1
Stk33
Gspt1
Npffr2
Arid5b
Has2
Gm3696
Traf3ip1
Cry1
Pou3f1
Nek11
Aste1
Sacs
Stambpl1
Skil
Tbc1d9
Gng3
Bscl2
Lrig3
Otx2
Trim24
Gpr137
Bad
Gm3739
Ptprt
Fgfr2
Rwdd1
Dynlt1b
Arhgap28
Iqschfp
Iqcj
Lhx2
Epb41l3
Nbdy
Ttc34
Cldn10
Dzip1l
Kcnh8
Gm3173
Sh2b2
Edn1
Ppp3r1
Zfp987
Irx5
Rexo1
Tubb1
Phactr3
Tti2
Nmnat3
Sgca
Stx12
Adat1
Elmo2
Cotl1
Fam13b
Sox4
Gfi1
Sspn
Iapp
Nxph4
Eml2
Mrpl22
Gemin5
Med25
Fuz
Zfp946
Tmem74
Zfp944
Zfp758
Ilvbl
Ccng1
Cxxc4
Hspa8
C9
Mapre1
Hey2
Rufy3
Negr1
Prkaa1
Ehmt2
Atxn1
Smad2
Lrrc30
Aasdh
Tgfbr1
Lama1
Cypt3
Fam122b
Celf3
Arvcf
2510009E07Rik
Arid3b
Cln6
Cma1
Zbtb32
Kmt2b
Armc3
Zfp317
3300002I08Rik
Ssh2
Xkr5
Foxb1
Rcor3
Erich3
Dedd
Wdr63
Zbtb18
Erbb4
Col3a1
Rbms1
Taar9
Zfp534
Zfp995
Ankrd13b
Git1
Msantd4
Axin2
Epha7
Grasp
Nr0b2
Grb2
Atg2a
Rbpj
Zeb2
Tars2
Slc6a5
Usp1
Zfp91
Lpxn
Otoa
Myo1e
Ndufa4l2
Zfp385b
Agpat3
Poglut3
Zfp984
Bcor
Schip1
Ypel3
Tbx6
Fam110b
Clic1
Gtdc1
Ankrd10
Pum2
Por
Gm3636
Zfp943
Zfp942
Ermn
Prpf40a
Arl6ip6
Pak2
Mcub
Alcam
Rps10
Tuba3b
Zfp521
Cyp7a1
2210418O10Rik
Rheb
Fbxo11
Otud1
Myl12a
Myl12b
Cacng4
Tmem242
Gtf2a1l
Krt222
Arfgap2
Golgb1
M6pr
Slc35f3
Kcnv2
Slc19a3
Ccdc171
Slc25a19
Pbld2
Hnrnph3
C4bp
Zfc3h1
Thap2
Zmym4
Gm11837
Megf9
Hhip
Eif2b5
Spidr
Tctex1d1
Acvr1c
Gm51573
Ogn
Sulf1
Nuak1
Syt16
Mad1l1
Lnpk
Slc23a4
Igdcc3
F8a
Tspyl2
Amfr
Ccdc88c
Rab5b
Tex2
Wnt7a
Fam151a
Capn12
Efnb2
Lefty2
Sox2
Pdha1
Tbc1d5
Top3a
Smcr8
Syt2
Nf1
Hoxa2
Kcnk2
Synpr
Lipg
Magi3
Lrp2bp
Gas1
Tmc5
Phc1
Jmjd1c
Clps
Galk1
Mt3
Kctd16
Tmem37
Spns1
Gm17660
Nrarp
Mpzl1
Sdk2
Cltc
Slc25a21
Xirp1
Gcnt1
Gm29776
Zc3h4
Clca1
Thrb
Nkx3-1
Cnmd
Iqsec1
Thg1l
Mex3a
Insyn2b
Acaa2
Tcf12
Eif4e3
Myl1
Nck2
Nin
Rapgef6
Ube2ql1
C77080
Aff1
Arhgef18
Tenm2
Nlrp10
Eif3f
Ralgds
Raet1e
Raet1c
Raet1b
Neurog2
Ybx1
Sesn2
Mrvi1
Spcs3
Ngdn
Klhl29
Stk32a
4930550C14Rik
Gigyf2
Ech1
Slain1
Pclo
Smad5
C2cd4d
Myog
Dcaf15
Wnt5b
Glb1l2
Cnnm2
Plcd3
Acbd4
Sncaip
Gm33933
Susd2
Dpp10
Eif2d
Amacr
Rdm1
Olfr1240
Selenos
Rsph4a
Folr2
Lrch4
Mospd1
Prpf18
Cntn1
Frmd4b
Aven
Ptpn14
Fbxw2
Radil
Bms1
Runx1t1
Amph
Tspan11
Arrdc4
Lhx3
Sstr1
Coa6
Bche
Mettl17
Meox1
Creb5
Tmem71
Frat2
Agtrap
Chodl
Zfp524
Fiz1
Cbwd1