ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1053919 | iPS cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX3010110: A549

◢ SRX3010111: A549

◢ SRX20550182: BT67

◢ SRX20550183: BT67

◢ SRX20550184: BT67

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX10616096: GM12878

◢ SRX10616097: GM12878

◢ SRX11374678: GM12878

◢ SRX11374679: GM12878

◢ SRX3322296: GM12878

◢ SRX3322297: GM12878

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX10478224: Hep G2

◢ SRX10478225: Hep G2

◢ SRX2423815: Hep G2

◢ SRX2423816: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX20532174: hESC H1

◢ SRX20532175: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX2023732: iPSC derived cardiac cells

◢ SRX2023764: iPSC derived cardiac cells

◣ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX2423402: K-562

◢ SRX2423403: K-562

◢ SRX5457481: K-562

◢ SRX5457482: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX8064823: Lymphoblastoid cell line

◢ SRX8064824: Lymphoblastoid cell line

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX11399800: NCI-H1963

◢ SRX11399801: NCI-H1963

◢ SRX11399802: NCI-H1963

◢ SRX9779520: NCI-H1963

◢ SRX4732741: Pre-B cells

◢ SRX7981741: Prostate cancer

◢ SRX7981742: Prostate cancer

◢ SRX7981743: Prostate cancer

◢ SRX7981744: Prostate cancer

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX9562892: RH-4

◢ SRX9562897: RH-4

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

NPAS4
WDR74
HTR5A
XKR7
GSN
RAB14
MTRNR2L2
IQSEC3
TDRD7
MTRNR2L8
CPLX2
GBA
SNX16
ZNF555
CAMTA1
UTP20
NBPF1
NUF2
POLR2J3
ZNF335
CYB5R4
PAXBP1
WASHC2C
RRP15
NDUFS7
NME1
CRNKL1
CFAP61
FANCD2
TRMT1
RBM48
PEX1
NOTCH2NLC
ARCN1
NOTCH2NLB
NOTCH2NLA
NAGPA
UTP25
SUMF1
SLC35A4
APBB3
KXD1
ZMPSTE24
KCTD18
NEURL2
CTSA
TIPARP
CCDC107
PPT1
NUP214
LAMP1
HEXA
AHCY
HPCA
PDE4DIP
PSMD9
HPD
CRBN
VPS33A
ZNF77
RBM19
IBA57
METAP1D
SPNS1
STX16
YJU2
QTRT1
WASHC2A
RNF187
SLC39A3
TMEM248
RAB37
SCFD2
SSBP1
EIF2D
TRIP4
BARHL1
COPS7B
CELSR3
DHDDS
P4HA1
EXO1
POLR3H
CALR
TMEM242
OSCAR
NDUFA3
MARCHF4
TRMO
WASHC5
NSMCE2
GATB
IQGAP3
TTC26
UBFD1
EARS2
RPS19
SNAP25
VPS50
HEPACAM2
IDH3B
ITGB3BP
EFCAB7
ZEB1
EPHA10
SMG8
CCNG2
IPO4
ZCWPW1
MEPCE
GSTA4
TPH2
SPATA2
USP35
KCTD21
CHGB
COMMD2
METTL1
EEF1AKMT3
PI16
NEK2
RBBP5
BIRC5
TDRKH
SPOP
TTLL4
MTF2
LARP1
ZCCHC7
RABL2B
NOL8
CENPP
NFE2L2
CDK7
SARS1
H4C8
SVOP
FBRS
SF3A3
TIGAR
MTFR2
KAT5
TIMM17A
DRG2
FAM227B
DTWD1
HAGH
FAHD1
PAFAH2
GPATCH3
CBWD5
CDK5RAP1
KLHL18
KIF9
SUPT7L
SLC4A1AP
L1CAM
GTF3C3
COMMD9
BLOC1S1
CBWD3
COMMD4
NDUFS3
KBTBD4
KNL1
CCDC200
INTS12
GSTCD
MRPL27
EME1
CPPED1
WDR36
NCAPH
CASC3
MAPK8IP2
RFX1
RTTN
BNIP3L
HMGB1
NBPF15
EIF1AD
BANF1
DHX40
SOD2
NUP107
MRM3
GLOD4
TRUB2
COQ4
DNAJC5
NOS3
POLR3F
DZANK1
TXLNA
FNBP1
PSME3
RPS29
SLX1B
SLX1A
BOLA2B
BOLA2
LUC7L2
DCUN1D2
MIS18A
PLEKHM3
HIBADH
ZNF684
MTRNR2L9
PWWP2A
CRKL
N6AMT1
KLHL22
SLC45A4
PDE4A
EBAG9
RBM28
MRPL44
UTP11
ATG14
VPS37D
ATR
USP54
CWC25
SLC12A9
STX18
NEIL3
TMEM199
POLDIP2
DDX18
FAM72C
H4C14
RFC1
STAM2
CCNA2
ZFPL1
CDCA5
MTIF2
WDR4
TSFM
RTF2
CCDC86
LRRC29
ASF1A
MFSD1
TOP3B
NDUFAF5
ESF1
YARS1
WTAP
METTL25
CCDC59
TOMM22
ADPRS
FMC1-LUC7L2
C8orf37
CBLL1
PEX3
ADAT2
SGO1
COX16
CSTF1
AURKA
ZNF830
CCT6B
CBWD6
LRRC59
DZIP3
CIP2A
GOLGA7
TRIAP1
SMYD5
ATP6V0D1
HUS1
VTA1
NMBR
CCDC88A
PRRC2B
SLC25A51
S100PBP
BCAS3
KLHL20
RRP12
MED23
BOLA2-SMG1P6
EDC3
EBNA1BP2
CFAP57
UBE2L3
MRPL40
HIRA
NAGK
C16orf71
ANKS3
SNRPE
COASY
GRWD1
USPL1
ACVR1
PCIF1
KIAA0895
CENPS-CORT
CENPS
CCDC106
DHX37
PFDN4
ZC3HC1
SEC31A
CKAP2L
MRPL45
TRMT6
MCM8
PGAM5
DPY19L4
C12orf66
TRAPPC6A
BLOC1S3
CFAP54
NUDT15
SSNA1
GDAP1
ANAPC2
ATL3
POLR3B
NSUN4
TBRG4
E2F6
MRPS15
YTHDF2
QTRT2
CCDC191
PGBD5
POLG
POLR3E
SUPV3L1
SAP30BP
RECQL5
KDM3A
UBE3B
NRL
KCTD10
DCAF11
TBC1D19
NAT10
NLE1
GTF2H3
EIF2B1
NUP35
PUS10
PEX13
CCDC146
UBE2O
AANAT
SASS6
ARFGEF2
ACVR2A
TACO1
SFSWAP
FBXL13
ARMC10
SKA1
GPATCH4
THAP9
RRM2
PPWD1
CENPK
TSR3
GNPTG
UTP3
PMVK
STAT3
TFPT
PRPF31
NOP16
HIGD2A
RAB11A
GTPBP10
LTV1
RLF
RGPD2
RGPD1
NUP54
SELENOH
FAM72A
CMSS1
CCNL1
RPS7
NOL10
RABEP2
URB1
TSN
RGL1
DNAJC25-GNG10
DNAJC25
FXN
C8orf33
GTF3C4
DDX31
TTC27
RPTOR
FMC1
FAM72D
HDAC2
INTS7
DTL
GLRA1
HNRNPD
TTC31
RAD51
VIM
SACM1L
HEATR1
FBXO5
TFB2M
CNST
RBM42
CDC73
NOL6
GON4L
EIF3F
INTS5
SLC24A1
TAF13
MRPS23
P2RX6
ING3
ARPC5
OPA1
FAM98B
TATDN3
NSL1
TMEM186
PMM2
MTBP
MRPL13
KIF15
KIAA1143
NCOA7
MTERF4
GOLM2
KIF20A
BRD8
TMEM41A
H4C3
GFM1
PRAME
TEFM
TMEM222
AP1M1
AAR2
NR6A1
H4C15
GTF2H4
TFIP11
C5orf51
POM121
PIKFYVE
CENPF
RABGAP1L
INO80B
KIF18B
TRIT1
ESCO2
IREB2
IL1R1
ZC3H15
SMN2
SMN1
GATAD2A
SLC25A26
CACTIN
OGDH
RAD54L
RRS1
SECISBP2
POLR3D
ATP5F1E
DCT
FAM228B
NUCKS1
TMEM181
NMNAT1
LZIC
UBE2Q1
PBK
CFAP299
CAP1
TRMT61B
EXOSC5
BCKDHA
FAM133B
RBKS
MMAA
BABAM2
NOL7
BOD1
PRMT5
KIAA1586
SIRT4
PPIL2
CEP135
SEC13
CNOT4
C16orf87
MRPL30
MITD1
PARL
CFAP298-TCP10L
CFAP298
PGK1
H6PD
USP2
SMIM12
RAD54L2
TARS2
DSTYK
TMEM101
MRPL21
IGHMBP2
DUS2
DDX28
DPF1
PIGU
G6PC3
DCLRE1B
AP4B1
ZNF165
PUM3
MRPS18C
HELQ
EIF2B3
BNIP1
MRPL1
GFI1B
TIGD1
EIF4E2
ZBTB45
RNF166
CTU2
CDC25B
MARCHF8
TOP3A
SMCR8
PPIH
NPPB
PIGBOS1
PIGB
GRN
SNRPB2
DNAJC11
TAMM41
THAP7
UFD1
CDC45
KIF2C
RPAP3
PRCP
DDIAS
STAT1
TBP
PSMB1
WFDC3
DNTTIP1
AIMP2
BLCAP
ABCB8
XRN2
PPP6R1
WDR11
PHOSPHO2-KLHL23
PHOSPHO2
CCDC173
DMAP1
KLHL32
SPHK2
SKIV2L
NELFE
DCAF10
ZNF558
RPL27
PNO1
ANKRD12
WDR46
PFDN6
YDJC
ANG
KDM1A
DPH1
IPO11
MRPL48
POU2F1
SYT11
MRPL39
PFKM
SNRPC
SMARCD2
SLC33A1
PSMD3
MIA3
GCDH
TFB1M
PAK1IP1
C6orf52
STX6
CLK3
AP5Z1
USP30
VPS29
RAD9B
SRSF11
TOR1A
CCDC142
ZNF721
PIGG
TMEM259
SF3B6
DPP9
SMG7
PALB2
SLC44A1
CYRIB
ACOX3
INO80C
KCNB1
LSG1
C6orf89
GFM2
CFAP20
IRF9
BCAR3
APOM
RUVBL1
TIMM9
NBN
KIAA0586
NOC3L
FAM207A
ZCCHC14
IGF2BP3
SUGCT
MPLKIP
FBXW8
PIH1D2
NKAPD1
DDIT4
RC3H2
AARS2
RBM45
KDM2A
LRP2BP
CCT2
ANKRD37
KLHL12
OXNAD1
DPH3
COMMD1
XRCC2
SCNM1
LYSMD1
TXNDC9
RIMBP3C
RIMBP3B
YIF1A
CDT1
PRMT2
PTPN4
TRAPPC9
MCM7
AP4M1
SYNJ1
ZGRF1
LARP7
KYAT1
TBL3
ZCCHC4
NOTCH2
LAMTOR5
NUP155
DDX19A
CERCAM
ARHGDIA
GTF2H2
TTC21B
RBSN
POMZP3
VPS45
DDX41
ZDHHC12
SGO2
MRPS33
LRRC37A3
U2SURP
FOXJ3
SMIM30
DCTN5
TOMM40
OAZ3
MRPL3
PMS2
HCFC2
GLT8D2
MTDH
DNTTIP2
TCP11L2
FBXW9
MRPS35
IFT46
TTI2
GTF3C5
C2orf42
FAM72B
SHC1
POLR2J
MIS18BP1
CCAR2
RPS27L
PNPT1
MCOLN1
EIF5B
RING1
CCNB1
ACTR6
PPIP5K2
POC5
DDX1
RAD9A
FAF1
GALK2
DDX21
DYNC2I1
PARP2
AJUBA
COPS4
ENDOV
POLR1B
SLF2
ATP6V1C1
DCP1A
SEPTIN9
ERMAP
VIRMA
SH2B1
RAD18
AIP
VARS1
MRTO4
EMC1
TMED1
SNX17
EIF2B4
DNAJB12
TMEM9
CYB561D1
RNASEH1
RTN4
CKS1B
FAM98A
RPA2
PLS1
RBL1
IMP4
CCDC115
DUS3L
KRR1
SCG3
MOK
TSGA10
VPS11
SECISBP2L
YBEY
TIMM10
CLSPN
CHST12
AGBL3
DNAJB4
IPO13
ILF2
WDPCP
MDH1
SPDYE14
SPDYE10P
EIF3H
CLUAP1
ZSCAN22
NOC4L
DDX51
FBXO4
TMEM230
HPS4
NADK2
SDAD1
XKR9
LACTB2
ABT1
PIP5K1A
THADA
PHB2
ZNF778
S100A13
C12orf73
ANLN
NEUROD4
TSEN54
CASKIN2
ELF1
CDC6
C16orf46
CCNC
ZNF473
VRK3
ESYT2
SGSM1
SLC35B1
SRRM3
MARCHF2
RHEBL1
AKAP1
ZNF408
ARHGAP1
POLD3
PDE1C
MPHOSPH10
MCEE
VPS26C
REXO4
MTR
BMS1
FBXO48
COPS8
APLF
WBP4
CDC20
RIOK1
CAGE1
SRRD
MOB4
ATAD2
WDR62
THAP8
EXOSC3
ZSCAN30
EPRS1
ALG10
SWSAP1
TM9SF4
C2CD5
FRA10AC1
ZSCAN25
ALG1
PCM1
MAIP1
PSMB7
NDUFC2-KCTD14
NDUFC2
SKA3
MRPL57
GLT8D1
BBS5
NDUFB3
FAM126B
TAF6L
MMUT
CENPQ
BAG6
TVP23B
EEF1AKNMT
DDX49
COPE
FAM149B1
ECD
ZBTB40
ZAR1L
BRCA2
TIMM23B
PARG
RIOK3
GET3
RPL18
D2HGDH
NDUFAF4
IARS1
RPIA
ADPGK
PSMF1
PAK4
CYREN
PPIL1
FAM135A
FANCI
AURKB
ZNF668
JMJD1C
DIABLO
PCNA
FAM156A
FAM117B
RBM8A
TAF3
MOB1B
RAPGEF6
PPIL3
NIF3L1
ASB6
MRPL38
DMAC2
CKMT1B
GPR158
ANKRD31
LRRC49
UCHL5
RO60
SHQ1
SCRN3
CIR1
PRRT3
LTN1
RPS8
POLI
SYF2
THAP10
MAN2C1
BLM
DSCC1
METTL26
PTRHD1
CENPO
AURKAIP1
NUDCD3
ASAH1
LTA4H
ABCF1
NOLC1
MVK
TTK
PSMD6
TTLL9
CTCF
ZDHHC24
TNPO3
ACTN3
TBC1D30
FBXO31
GPN1
CHCHD3
CCDC121
NTSR2
DNPEP
LZTR1
HAX1
RNASE4
PELP1
GTF2H2C
GTF2H2C_2
STAG1
SAR1B
YIPF3
POLR1C
MRPS28
ECSIT
CZIB
PSEN2
SNX1
SPG21
CCDC97
TUT1
EMC4
ALKBH3
ATG16L1
TIMM21
FBXO15
VPS35
ACYP2
SETDB1
ABCB6
BUB1B
ZNF276
VAC14
PRPSAP1
BRAP
ACAD10
URB2
TAF5L
FCF1
AREL1
TANK
NTAQ1
NSFL1C
SLC35A3
CCDC77
ENOSF1
ASNS
AMZ2
ACBD6
XPC
LSM3
CGGBP1
CAND1
ZNF391
HEXIM1
POLQ
FAHD2A