ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9562892 | RH-4
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX16386913: 293

◢ SRX3010110: A549

◢ SRX3010111: A549

◢ SRX24188777: BJ

◢ SRX24188786: BJ

◢ SRX20550182: BT67

◢ SRX20550183: BT67

◢ SRX20550184: BT67

◢ SRX20599715: Caco-2

◢ SRX20599717: Caco-2

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX10616096: GM12878

◢ SRX10616097: GM12878

◢ SRX11374678: GM12878

◢ SRX11374679: GM12878

◢ SRX3322296: GM12878

◢ SRX3322297: GM12878

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX10478224: Hep G2

◢ SRX10478225: Hep G2

◢ SRX2423815: Hep G2

◢ SRX2423816: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX2023732: iPSC derived cardiac cells

◢ SRX2023764: iPSC derived cardiac cells

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX2423402: K-562

◢ SRX2423403: K-562

◢ SRX5457481: K-562

◢ SRX5457482: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX8064823: Lymphoblastoid cell line

◢ SRX8064824: Lymphoblastoid cell line

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX11399800: NCI-H1963

◢ SRX11399801: NCI-H1963

◢ SRX11399802: NCI-H1963

◢ SRX9779520: NCI-H1963

◢ SRX4732741: Pre-B cells

◢ SRX7981741: Prostate cancer

◢ SRX7981742: Prostate cancer

◢ SRX7981743: Prostate cancer

◢ SRX7981744: Prostate cancer

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◣ SRX9562892: RH-4

◢ SRX9562897: RH-4

◢ SRX19212560: SK-N-MC

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

GSN
RAB14
NPAS4
AFAP1
GOLGA7
WDR74
KRTAP4-3
DCUN1D2
MSS51
ZNF555
KYAT1
NPEPL1
WBP1L
SLC25A51
RCAN1
LGI4
ZAR1L
BRCA2
KRTAP4-12
KRTAP4-4
UBAP1L
PPP1R18
C1QTNF1
KRTAP4-2
TTI2
RNF186
PIKFYVE
SLC35A4
APBB3
TRIM62
TRIM16
HRCT1
CDK7
PTPRD
GRK1
CLSPN
KRTAP4-5
ANKRD31
RNF187
DHCR7
EEF1A1
DHDDS
HIP1
SYTL3
ZNF668
NOXO1
OLFM2
KRTAP4-1
NEBL
MTRNR2L3
YTHDF2
G2E3
SH2D7
NBPF1
PWWP2A
SLC25A34
PGK1
APRT
NAV2
MYLK3
PTGES
ZNF77
KIAA1586
CYB561D1
CUL9
FNDC5
ZNF806
UTP20
TBC1D30
GNS
B3GALT5
RPS8
GFRA1
VGLL4
TJAP1
CLTA
STRA6
VGLL3
PVALEF
AATK
AGFG2
ASAH1
SLC35E2A
SNX8
LRRC17
GSX1
CPLX2
C20orf141
PLEKHD1
DGKB
KRTAP9-8
PDE4DIP
PIP5K1A
HTR5A
CDK20
PARP2
TSPAN33
IFT46
TIPARP
SVOP
KAT2B
HIP1R
XKR7
CCDC107
C16orf71
ANKS3
CSNK1A1
PCIF1
POC5
TUBG1
RETREG3
CCDC200
NASP
FANCD2
SEC31A
THAP9
HSPB7
CCDC141
NSUN5
MTRF1
NAA16
TUBA1B
MYLK4
ACVR1
DST
SIKE1
CAV3
ZNF181
DCTPP1
HHIPL2
PKD1L2
MFSD1
BSDC1
GPR108
CCDC89
KRTAP4-9
POLI
OGG1
MPRIP
BRK1
HMGB1
ELMO1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
BCL2L1
JAK2
PIGK
GBA
TXLNA
TMED1
SRP54
ZNF442
MRPL38
ABCC10
SCP2
RBKS
BABAM2
CREB5
NIBAN2
YIPF3
POLR1C
SYTL2
RYR1
HNRNPD
ZCCHC7
ACOX3
PLK3
CTSS
DHX16
PAFAH2
CSTF1
AURKA
PLAAT5
BBS9
TBC1D1
ZNF718
ZNF32
ZNF595
AMPD3
FBXL13
ARMC10
MRI1
ARL6
ICAM4
SCFD2
ABCG2
GGT5
TNC
POMP
DARS1
DFFB
CEP104
TMEM248
AARS2
ATAT1
PTK6
ERCC1
RGS3
KXD1
MRLN
ABHD2
ZMYM1
PCNP
NCAPD2
MRPL51
TMEM175
GAK
HDAC11
PPM1B
OIP5
NUSAP1
ALLC
CFAP299
CHRNG
INKA2
DDX20
KCNMA1
TAGLN3
TBCD
KMT5A
EIF3C
EIF3CL
TBC1D22A
LAMTOR5
POLDIP3
KHDRBS1
AKR1B10
CCNG2
UBE2L3
CCDC30
BCAR1
CBLL1
NSUN4
LMOD3
SMIM30
TOP1
TTC16
PTRH1
CHI3L2
CLDN15
FAM240C
PRKAG2
PCM1
CCDC43
TNFRSF19
OPRD1
RUSC1
TIMP4
ARFGEF2
TOM1L2
DRC3
RASGRP3
DIRAS2
MEF2C
TMEM222
FAN1
PLAGL1
MYBPC2
HIBADH
ATP6V0D1
TBC1D4
DHTKD1
SPON2
KLHL31
NAA60
POLR2J3
TMEM242
CBWD5
CBWD3
CBWD6
GPATCH8
USP54
FGD4
MAP3K7CL
PRRC2B
HUS1
FAM98B
PTK2
DDX56
RAB18
RPA3
ZNF57
SLC30A7
EXTL2
ARID5B
CDK2AP1
CDK15
FGL2
CRNKL1
CFAP61
RPS19
NRL
DCAF11
NARS2
IL21R
ACIN1
SLC35E2B
CDT1
MAD2L2
GNE
ANKRD18B
ALK
MYLK2
ACP4
NEB
NFIB
PRPF6
FREM1
ATAD3A
ERBB2
PGAP3
STX16
SLC12A9
WDR36
NOLC1
RING1
CFLAR
PRORP
PPP2R3C
MYPN
BNIP3L
ISG20
ZSWIM7
TTC19
RBPJ
MTMR14
LSM10
FILIP1
LEMD1
RTF2
NAA35
NAGLU
RNF149
CAPNS1
MKNK1
ATXN7L3B
PAXBP1
UTP25
RAPGEF6
B9D1
PPP1R21
MAPK7
TFEB
OR51T1
C1QA
ABCB8
PKIG
DLK2
DHX8
ADRM1
CROT
LMNB1
TP53RK
ACVR1B
EIF2B3
FAM117B
MICU2
CUL7
SIRT4
DYSF
BICRAL
FCRLA
DNAJC25-GNG10
DNAJC25
PLAC8
FRRS1
ZNF335
ADPRS
TADA2B
CCDC96
SMIM15
HCFC2
GLT8D2
PPP1R11
EXOSC3
COA3
CNTD1
MELTF
TIGD2
ATP2A1
ADNP2
SCRN2
ASB18
C17orf49
ZGPAT
ARFRP1
TRERF1
NME9
PLEKHG1
RABGEF1
MSL2
LTBP1
PEX3
ADAT2
LZTS3
TMEFF2
SLC35C2
CREM
SMYD1
PXDNL
PRMT2
BLCAP
FOXJ3
CRELD1
ATF2
USP14
FHL2
CNPY3
HPS6
MYO18A
LRBA
ZFP69
SETDB1
B4GAT1
MRPL34
MACO1
MCM6
DDX41
GRN
MAP2K2
ATP5F1E
NR6A1
BNIP1
NEU1
COASY
CDK11B
CDK11A
PATL1
NUDT9
UBE2C
TRIM16L
CAPN15
CTR9
LETMD1
IFI6
TPM2
OXNAD1
DPH3
SMG7
RANBP6
SDHAF4
C6orf226
IQSEC3
NDUFS7
USP16
LZTS2
CSRP1
TRIM55
RXRG
FBXO48
APLF
INTS9
HMBOX1
CAPN7
TTC9
TSGA10
G6PC3
AP1S1
PTTG1IP
C1orf105
TBRG4
HOMEZ
SSX2IP
ARFGAP2
OSBPL7
ZNF697
TMEM129
TACC3
PMP22
XPC
LSM3
MINDY2
PRPF18
UPF3A
RASGRP1
AJM1
NEURL2
CTSA
AGBL3
CNTRL
N6AMT1
SEPTIN9
NAPA
LCORL
FAM186A
MYMX
GCDH
MDM2
ARRDC4
ZNF75A
TIGD7
PLEKHG5
ULBP3
HPCA
SF3A3
HDAC2
ZNF558
SAR1B
PIK3CA
NUFIP2
SAR1A
LRIG2
TPM3
RND2
GPSM1
KCNB1
GTF2H2C_2
GTF2H2C
AUNIP
STON2
PCLO
C6orf118
TMEM41A
CNOT4
S100A13
IQCG
RPL35A
S100A1
RPS29
PIGU
TRIM45
PSMA5
FAAP24
CEP89
TTLL11
TBCC
RAD18
SLAIN2
EXOSC9
GMPPA
NOL8
CENPP
COMMD4
KDM3A
CCDC146
SUPT6H
SDF2
DDAH2
BAZ1A
MC4R
SLC25A26
COMMD1
RRM2B
GINS1
FAM168A
SPECC1
ZNF106
LOC100996750
KRTAP4-7
CHRNA9
LTV1
YBEY
MCM3AP
GBE1
SEC23B
TFF3
PFKM
NGLY1
SENP1
OXSM
KCTD7
SLC4A2
MTIF3
TMEM44
FAAP20
CDK5
MRPL45
RPS27L
UGDH
ATXN2L
XKR9
LACTB2
RABEPK
ETV4
TPM1
DALRD3
NDUFAF3
AIG1
HIBCH
SNX11
BCL2L13
PSMD8
ADK
TTI1
RPRD1B
NSG2
HACL1
BTD
RBL2
OGDH
POLR3E
GTPBP10
WDR77
ATP5PB
MED15
WDR90
ANKRD1
KRTAP9-1
TRIM72
UTP3
NUP42
NEUROD4
NOP14
GRK4
KRAS
SCAI
SLC7A7
CRBN
MARCHF8
TBPL1
SLC35B2
AP1B1
ZNF775
TRIP6
AGAP3
SGIP1
RIMBP3B
RIMBP3C
ZNF721
PIGG
TM7SF2
RRAS
ZNF510
AHCY
C6orf89
CLUAP1
USP37
CNOT9
ELAPOR2
MRPS2
C9orf116
LIMCH1
NUF2
SOD2
NADK2
JMJD1C
CHMP7
MAEA
SMTN
SIX2
TDRD7
IARS1
TMBIM4
THAP1
TGFBR2
E2F1
WASHC2A
TAF13
WDR3
GDAP2
UBA52
GSK3A
MUSK
DYNC2LI1
ZNF34
HS3ST3A1
SPAG8
SSNA1
ANAPC2
RNF166
CTU2
FAHD2A
COX10
TATDN2
CASP6
MFSD3
MGST3
PNPLA7
KLF12
TTC26
NBPF15
MAP2K1
ARHGAP24
FAM174A
PODXL2
ETFBKMT
GYG1
EPHA5
PGAP4
CHGB
SKIV2L
NELFE
RPA2
PDXDC1
KANSL1
SEC24A
KATNAL1
SULF1
SCMH1
COMMD2
RBM42
TUFT1
ZBTB6
PPP3CA
KPNA6
PTPA
CRAT
MTRNR2L8
RPL27
HPS3
HERC5
ESPL1
UBTD2
UBXN1
ZBTB10
PPT1
PPIL2
SDAD1
TTLL9
POT1
NCEH1
HECTD3
ZNF16
DEDD
LRIG1
CSNK1E
DLEU7
ZNHIT6
ERMARD
EFCAB2
RGPD8
RGPD5
RAD50
RGPD6
MEA1
PRKAR1B
GPT2
NOMO2
MTREX
DHX29
TTF1
GNG11
MMP26
CYB5R4
DZIP3
CIP2A
IREB2
RHEBL1
TOR1A
ZNF778
FAM76A
KIF2A
ANO6
MECOM
FAM177A1
GBF1
VSIR
PEX6
TLN2
BCAS3
CCAR2
OSGEP
APEX1
TRAPPC8
UBXN11
IFT52
ARSG
S100A2
TEP1
LPIN3
FOSL2
AASS
DMPK
MUSTN1
HUNK
UBFD1
EARS2
POM121
STT3A
CEP126
DBR1
PLK2
PNRC2
NPPA
MMAA
COMMD6
UCHL3
STX2
PSMC3
NCK1
TESK1
RABL6
DCDC2B
SLF2
DPP3
GNL2
ZNF263
FAM120B
NQO1
CNN3
ZNF287
ULBP2
CDIP1
MAD2L1BP
KATNA1
CCDC91
MPND
ANK1
POLK
CERT1
BAZ2A
DRD2
GTPBP2
CHMP2B
RHOJ
URI1
NOL6
TAMM41
MRPS31
CDC7
ATL2
ZNF69
MAN2B2
DCLRE1B
AP4B1
PIGBOS1
PIGB
WFDC3
DNTTIP1
MCCC1
TK1
AFMID
MBD4
IFT122
MALSU1
EIF6
ZNF790
NFKBIE
ZNF345
SYNC
UTP11
MTIF2
CCNC
BRCA1
CAT
PKD1
DHX35
GPR176
C4orf48
KRT80
LIMK1
TNNT2
PPP6R1
DNAJC11
SLC25A36
ADAMTS17
UEVLD
ODF2
PEF1
TAF4B
RPAP2
GLMN
C12orf57
ZBBX
TSPAN19
LRRIQ1
MYCBP
SLC35A5
ATG3
STK11IP
CHCHD3
BBS1
STK40
PSRC1
GSTP1
INSIG1
RNF19B
SLC35G1
BCAN
ALOX15
AIMP2
PMS2
IRF9
DHODH
RSPH3
ABCD3
SELENOS
TOR2A
TMEM198
CHPF
EIF4H
CLUH
HELB
ZNF112
CPA5
MVB12B
CALR
RBL1
MFSD4B
MRPS16
PDCD10
SERPINI1
ZCWPW2
AZI2
TCF4
TMEM18
ZNF846
LRRC58
OTUB1
ZNF484
LRIF1
HAUS4
C11orf52
SULF2
GTF2F2
ST8SIA2
P2RX6
LRRC37A3
ATF7IP
POLD2
PIP4K2B
PHACTR4
PCCB
RFC4
AKAP10
EHD4
LETM1
ENPP4
CLIC5
RARB
VPS37D
CGGBP1
C3orf38
ZCCHC3
GPATCH1
TADA3
ARPC4-TTLL3
ARPC4
SRP19
SAPCD2
NBR1
GPR107
ALKBH5
IMMP1L
ELP4
ANTKMT
ZNF781
HERC2
SYNPO2L
MOB3C
GJA3
DHX37
WDR11
RC3H2
WDR55
ERGIC2
METTL3
TPX2
HMGA1
PDE11A
PDSS2
RALB
ZMYM2
PLCB2
SPNS1
METTL1
EEF1AKMT3
SASS6
PBK
RIOK3
REV1
PPRC1
HSD17B11
ATG7
ZFP69B
CSE1L
RPS6KL1
FREM2
STARD13
SPATA2
MIS18A
NUDT15
TOP3A
SMCR8
IPO13
PIEZO1
HIPK1
SLC39A13
NDUFA5
ERBB3
NOTCH1
MAST4
ZNF487
LAP3
SLC25A35
ZNF395
FITM1
KRTAP5-3
AKT1
RAPSN
RABL2B
KLHL32
PUM3
NDUFAF4
TTF2
ECSIT
RTEL1
NFIA
NPDC1