ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7981743 | Prostate cancer
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX16386913: 293

◢ SRX3010110: A549

◢ SRX3010111: A549

◢ SRX24188777: BJ

◢ SRX24188786: BJ

◢ SRX20550182: BT67

◢ SRX20550183: BT67

◢ SRX20550184: BT67

◢ SRX20599715: Caco-2

◢ SRX20599717: Caco-2

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX10616096: GM12878

◢ SRX10616097: GM12878

◢ SRX11374678: GM12878

◢ SRX11374679: GM12878

◢ SRX3322296: GM12878

◢ SRX3322297: GM12878

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX10478224: Hep G2

◢ SRX10478225: Hep G2

◢ SRX2423815: Hep G2

◢ SRX2423816: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX2023732: iPSC derived cardiac cells

◢ SRX2023764: iPSC derived cardiac cells

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX2423402: K-562

◢ SRX2423403: K-562

◢ SRX5457481: K-562

◢ SRX5457482: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX8064823: Lymphoblastoid cell line

◢ SRX8064824: Lymphoblastoid cell line

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX11399800: NCI-H1963

◢ SRX11399801: NCI-H1963

◢ SRX11399802: NCI-H1963

◢ SRX9779520: NCI-H1963

◢ SRX4732741: Pre-B cells

◢ SRX7981741: Prostate cancer

◢ SRX7981742: Prostate cancer

◣ SRX7981743: Prostate cancer

◢ SRX7981744: Prostate cancer

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX9562892: RH-4

◢ SRX9562897: RH-4

◢ SRX19212560: SK-N-MC

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

PFDN4
CUL2
INTS13
FGFR1OP2
VPS26C
CSTF2T
PKIA
TRIM45
COX7C
ANAPC15
CACYBP
SGMS1
ENDOV
PTRHD1
CENPO
TRIQK
ACYP2
SRSF1
NR2C2
FERMT2
TM9SF4
SUGP2
ARMC6
ATG4C
PRKCI
RPS14
VAMP4
SBNO1
MRPS7
GGA3
GLYCTK
GORAB
RNF19A
PIP4P2
ZBTB3
USP16
NCOA2
JMJD1C
REEP3
ZSCAN5A
TTC30A
ZNF16
LYRM4
FARS2
PPIP5K2
ZDHHC5
ATG16L2
RBM12B
ZNF133
SH3BGR
LCA5L
ETV4
NUDT12
SMC6
GEN1
TMUB2
FNTB
ZC3H6
THG1L
OXR1
CBLL1
GSDMC
ANXA4
LANCL2
AAK1
NBN
GOSR2
RRP15
FBRS
EIF2AK3
EPC2
ITSN1
CRYZL1
FBXO33
SH3BP5L
KAT5
SYVN1
ING3
ZNF33A
YWHAG
HIF1A
SLC35A1
FAM76B
CEP57
RPL7
RDH10
PRPF40A
SMARCAL1
ARL6IP6
ZNF333
STAM2
HNRNPH3
PBLD
CREM
CHMP3
ZNF808
TCAIM
KDM8
COQ7
SNX16
KNL1
S100A13
CHTOP
XPNPEP3
ST13
TMTC2
FAM71E1
EMC10
ZNF335
NEPRO
ITGB1
P4HA1
TRIM41
GTF2IRD2
KNTC1
EIF1
IBA57
SYS1
ATP5PF
ROBO3
GABPA
SIPA1L1
DCTN1
MFSD3
DNAJB12
VPS35
DARS2
CENPL
ZCWPW2
AZI2
NFKBIZ
ELAPOR2
L2HGDH
DMAC2L
FNBP4
HDLBP
SEPTIN2
MBOAT7
TSEN34
DZIP3
CIP2A
PDCD10
SERPINI1
ERGIC2
CHAC1
MIA3
NPC1
COIL
NDRG1
PREPL
CAMKMT
USP54
PAIP1
COMMD6
UCHL3
TARS1
DENND3
NME6
ZNF200
U2AF2
MIB2
CDON
ZCWPW1
MEPCE
BBS9
NUBP1
LLGL2
FAM156A
ZFP91
LPXN
PBDC1
CBL
PRDM10
CTNND1
LUC7L2
EBAG9
FMC1-LUC7L2
FMC1
TWF1
YTHDF3
C11orf65
MAOA
COQ8A
PEX2
SOCS5
CHMP2B
NAA50
ATP6V1A
SUPT3H
ZNF33B
SHPRH
ERMAP
MMADHC
SVBP
DSN1
MOSPD3
PSORS1C1
RAD51
FBXL19
RIOK2
TTC30B
TOB1
HSPA8
PTPN2
IMPA1
C1orf174
DPH6
OPLAH
DDX59
EIF2S2
PTPRK
LAMB2
YWHAZ
PRRC2C
EIF4B
KMT2E
ATG14
TANK
CCDC130
ZNF624
AP2A1
ROCK2
ALG13
GPR155
SLC35A5
ATG3
LOC100287896
LIPT2
PTK2
RNF207
TMED1
NDUFA4
USP40
RIPK2
PRDM9
FUT11
SRSF6
MRPS28
HERC4
CCDC83
DHRS7
CHEK1
GTPBP8
FER
WDR6
ATXN7L1
NDUFB4
UBL3
CTBS
CEP170
SDCCAG8
CD2AP
NFYA
OARD1
SRP54
MORF4L1
WWP1
IGF2BP2
DPY19L4
TCAF1
TMEM254
EXPH5
NFE2L2
ERAP1
APLP2
BRMS1L
TMEM50A
PHF12
ARCN1
SPTSSB
ARHGAP27
ANXA3
PRKAR1A
MTHFD2
SYDE2
VPS45
ZNF644
PIK3C2A
C2CD4D
VCL
EIF4A2
CAT
TLK1
HIPK3
RRAS
TRIM46
KRTCAP2
SCAF1
TBL1XR1
PDE4DIP
USP19
CTHRC1
CCDC50
MET
UTS2B
NCSTN
COPA
PLEKHF2
ZNF761
ADAR
PCF11
CHMP4C
PRMT2
NQO1
PPP4R3B
ANXA7
USP48
ZNF460
SH3GLB1
SYBU
LXN
CYCS
NFIB
RFX3
TPT1
DCUN1D4
TMEM134
CYB561A3
TMEM138
RBM7
C11orf71
RDH11
TTC3
MARS1
ARHGAP9
KAT7
PIGP
CCZ1B
PTPN14
SETD5
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
LMAN1
UBA1
NWD1
SLC10A7
H4C14
H4C15
GRPEL2
CNOT1
PNMA1
HSPBAP1
SLC49A4
MPP5
NUFIP2
SRD5A3
NPAS4
WDR74
HTR5A
GSN
RAB14
MTRNR2L2
XKR7
IQSEC3
TDRD7
MTRNR2L8
CPLX2
GBA
CAMTA1
ZNF555
NBPF1
NUF2
CYB5R4
UTP20
POLR2J3
PAXBP1
NDUFS7
NME1
WASHC2C
CRNKL1
CFAP61
SLC35A4
APBB3
RBM48
PEX1
FANCD2
UTP25
TIPARP
ZNF77
KCTD18
KXD1
TRMT1
ZMPSTE24
CCDC107
NUP214
NAGPA
RNF187
NEURL2
CTSA
AHCY
HEXA
PSMD9
HPD
SUMF1
LAMP1
YJU2
PPT1
TMEM248
CCDC200
VPS33A
WASHC2A
COPS7B
STX16
HPCA
RBM19
TRIP4
RPS19
QTRT1
TMEM242
SCFD2
POLR3H
CRBN
EXO1
SPNS1
SSBP1
DHDDS
WASHC5
NSMCE2
TTLL4
CELSR3
EIF2D
ZEB1
METAP1D
BARHL1
TRMO
UBFD1
EARS2
RAB37
GSTA4
CALR
ITGB3BP
EFCAB7
ZCCHC7
SNAP25
SLC39A3
TTC26
IQGAP3
PWWP2A
USP35
KCTD21
RBBP5
MARCHF4
TDRKH
METTL1
EEF1AKMT3
DCUN1D2
VPS50
HEPACAM2
CCNG2
IDH3B
RABL2B
SOD2
NEK2
OSCAR
NDUFA3
SMG8
SPATA2
IPO4
H4C8
CHGB
EPHA10
TPH2
COMMD2
NOL8
CENPP
TIGAR
GATB
NBPF15
MTFR2
LARP1
WDR4
TIMM17A
FAM72C
FAM227B
DTWD1
RPS29
CDK7
SARS1
HAGH
FAHD1
BNIP3L
BIRC5
SLX1B
SLX1A
BOLA2
HIBADH
SVOP
BOLA2B
SUPT7L
SLC4A1AP
SPOP
SF3A3
MTF2
HMGB1
CASC3
WTAP
TRUB2
COQ4
SEC31A
RFX1
COMMD4
POLR3F
DZANK1
CPPED1
N6AMT1
EIF1AD
BANF1
KLHL18
KIF9
PI16
CBWD5
NCAPH
PSME3
SLC12A9
RTTN
WDR36
SLC45A4
NUP107
PAFAH2
CBWD3
THAP9
TXLNA
GPATCH3
MRM3
GLOD4
MIS18A
METTL25
CCDC59
NDUFS3
KBTBD4
CCDC88A
MRPL27
EME1
KDM3A
CDK5RAP1
GTF3C3
BLOC1S1
FNBP1
SMYD5
POLG
RTF2
L1CAM
MFSD1
PRRC2B
DRG2
INTS12
GSTCD
KLHL22
DHX40
BCAS3
ATR
ASF1A
NSUN4
VTA1
NMBR
DNAJC5
BOLA2-SMG1P6
YTHDF2
YARS1
COMMD9
NUDT15
NEIL3
MAPK8IP2
FAM72D
CRKL
FAM72A
PEX3
ADAT2
ZNF684
PLEKHM3
UTP11
RBM28
CSTF1
AURKA
TRAPPC6A
BLOC1S3
SLC25A51
USPL1
C8orf37
MTRNR2L9
TSFM
TBRG4
NRL
DCAF11
RRP12
TMEM199
POLDIP2
PDE4A
POLR3B
OGDH
DDX18
KLHL20
S100PBP
UBE2L3
MRPL40
HIRA
C16orf71
ANKS3
NOP16
HIGD2A
MRPL44
MTIF2
HUS1
CCDC146
ATL3
STAT3
NOS3
KIAA1586
E2F6
C12orf66
STX18
LRRC29
TOMM22
HNRNPD
NUP35
ZFPL1
CDCA5
RFC1
FBXO5
CKAP2L
CWC25
ATP6V0D1
CMSS1
NAGK
PGAM5
TRIAP1
KIAA0895
FBXL13
ARMC10
QTRT2
CCDC191
TOP3B
CCNA2
VIM
ABCB8
GTF2H3
EIF2B1
POLR3E
MED23
INTS7
DTL
CCDC86
SNRPE
ACVR1
VPS37D
GOLGA7
SUPV3L1
SASS6
TTC31
LRRC59
TRMT6
MCM8
MRPL45
TTC27
CENPS-CORT
CENPS
KIF20A
BRD8
COX16
CCDC106
RAB11A
SGO1
NDUFAF5
ESF1
TFB2M
CNST
PGBD5
GRWD1
ADPRS
CBWD6
PMVK
PUS10
PEX13
LTV1
EBNA1BP2
CFAP57
RGL1
EDC3
MTBP
MRPL13
PIKFYVE
UTP3
ZC3HC1
GDAP1
TBC1D19
SLC24A1
CACTIN
GTF3C4
DDX31
SSNA1
ANAPC2
PHOSPHO2-KLHL23
PHOSPHO2
CCDC173
NOL6
HDAC2
OPA1
ZC3H15
DNAJC25-GNG10
DNAJC25
URB1
P2RX6
CFAP298-TCP10L
CFAP298
SACM1L
ARPC5
PCIF1
SAP30BP
RECQL5
TFB1M
GPATCH4
NAT10
PIGU
GTPBP10
GTF2H4
CFAP54
C5orf51
FAM228B
NUCKS1
TMEM186
PMM2
CDC73
RBM42
RPTOR
CCNL1
PPIL2
AIMP2
NMNAT1
LZIC
NLE1
TOMM40
C8orf33
UBE2O
AANAT
RABGAP1L
HEATR1
TSR3
GNPTG
EXOSC5
BCKDHA
NOTCH2
DCLRE1B
AP4B1
TMEM41A
TACO1
THAP7
DHX37
RABEP2
PPWD1
CENPK
TATDN3
NSL1
NUP54
TFPT
PRPF31
RGPD2
RGPD1
TTC21B
FAM133B
SIRT4
AP1M1
IREB2
CNOT4
MRPS15
WDR46
PFDN6
COASY
RBKS
BABAM2
ARFGEF2
NOL7
POLR3D
FAM98B
SECISBP2
MRPS23
NCOA7
UBE3B
KCTD10
YIF1A
TSN
TEFM
KIF18B
ATP5F1E
KLHL32
TIGD1
EIF4E2
ZNF830
CCT6B
MTERF4
KIF15
KIAA1143
GOLM2
SMIM12
RRM2
CAP1
ZNF558
UFD1
CDC45
CENPF
RUVBL1
PPP6R1
EIF3F
FXN
APOM
GATAD2A
UBE2Q1
PAK1IP1
FAM72B
C6orf52
CCDC142
MRPS33
TRMT61B
PUM3
CLK3
NR6A1
SRSF11
CDC25B
PMS2
ACVR2A
PNO1
GCDH
SKA1
RPS27L
SELENOH
SFSWAP
GFM1
MMAA
GON4L
USP2
RLF
STAT1
INTS5
BNIP1
SLC25A26
CEP135
TAF13
TAMM41
POM121
MRPL48
RPAP3
DCT
TMEM222
MRPL30
MITD1
C16orf87
DSTYK
ZGRF1
LARP7
DSCC1
EIF2B3
BCAR3
RPS7
TBP
PSMB1
PRCP
PARL
H4C3
PTPN4
CFAP299
ANKRD12
CYRIB
NOL10
NTAQ1
SF3B6
LRP2BP
ANKRD37
MRPL1
SLC33A1
GLRA1
MCM7
AP4M1
PRMT5
PFKM
WDPCP
MDH1
FAM98A
RIMBP3B
TFIP11
ZNF165
AAR2
ABCB6
DDIAS
PSMD3
PGK1
ARHGDIA
INO80B
PRAME
ATAD2
ESCO2
DDX41
KLHL12
POU2F1
WDR11
BLCAP
RPL27
POC5
H6PD
TOP3A
SMCR8
DNAJC11
PARP2
RRS1
SUGCT
MPLKIP
TSGA10
TMEM181
SNX17
G6PC3
EIF2B4
CCT2
OXNAD1
DPH3
SYNJ1
RBL1
ESYT2
C2orf42
CZIB
KIF2C
SWSAP1
ZBTB45
KDM1A
DUS2
DDX28
MRPS18C
HELQ
AGBL3
RAD54L
INO80C
GRN
MRPS35
ACOX3
SLC35B1
C6orf89
RIMBP3C
SKA3
MRPL57
YDJC
RHEBL1
BOD1
WDR62
THAP8
SMN2
SMN1
DPP9
RTN4
PIGBOS1
PIGB
XRN2
NADK2
DUS3L
VPS29
RAD9B
PIH1D2
NKAPD1
PCNA
DCAF10
SCNM1
LYSMD1
SGO2
LRRC37A3
IMP4
CCDC115
TARS2
STX6
SKIV2L
NELFE
RPA2
FBXO48
APLF
MRPL21
IGHMBP2
PPIH
AP5Z1
RIOK1
CAND1
CAGE1
GFM2
C16orf46
DDX21
COPS4
HCFC2
GLT8D2
RC3H2
YBEY
KYAT1
TRIT1
MARCHF8
IPO11
PALB2
NOC3L
RNASEH1
COMMD1
ZSCAN22
LSG1
PBK
MOB4
SMG7
FAM207A
GTF3C5