ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11399801 | NCI-H1963
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX16386913: 293

◢ SRX3010110: A549

◢ SRX3010111: A549

◢ SRX24188777: BJ

◢ SRX24188786: BJ

◢ SRX20550182: BT67

◢ SRX20550183: BT67

◢ SRX20550184: BT67

◢ SRX20599715: Caco-2

◢ SRX20599717: Caco-2

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX10616096: GM12878

◢ SRX10616097: GM12878

◢ SRX11374678: GM12878

◢ SRX11374679: GM12878

◢ SRX3322296: GM12878

◢ SRX3322297: GM12878

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX10478224: Hep G2

◢ SRX10478225: Hep G2

◢ SRX2423815: Hep G2

◢ SRX2423816: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX2023732: iPSC derived cardiac cells

◢ SRX2023764: iPSC derived cardiac cells

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX2423402: K-562

◢ SRX2423403: K-562

◢ SRX5457481: K-562

◢ SRX5457482: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX8064823: Lymphoblastoid cell line

◢ SRX8064824: Lymphoblastoid cell line

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX11399800: NCI-H1963

◣ SRX11399801: NCI-H1963

◢ SRX11399802: NCI-H1963

◢ SRX9779520: NCI-H1963

◢ SRX4732741: Pre-B cells

◢ SRX7981741: Prostate cancer

◢ SRX7981742: Prostate cancer

◢ SRX7981743: Prostate cancer

◢ SRX7981744: Prostate cancer

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX9562892: RH-4

◢ SRX9562897: RH-4

◢ SRX19212560: SK-N-MC

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

ZMPSTE24
PPT1
ZNF684
RLF
CAP1
PPIE
TRIT1
EXO5
SKA1
MYCL
UTP20
UTP25
NT5C1A
POLR3D
HPCAL4
BIRC5
CDK7
ACVR1
RABL2B
HEXA
MFSD2A
NUF2
EXO1
RTTN
TRMT1
SEMA3C
MRPL45
NKX2-8
IQGAP3
WDR7
RRP15
CRNKL1
CFAP61
TIMM21
FBXO15
GBA
BROX
AIDA
NTAQ1
CCDC102B
TMX3
DHX37
SPACA1
PHB2
TMEM241
NKX2-1
LRRC29
NEURL2
CTSA
QTRT1
FAM72C
FAM72D
ACTR6
FAM72A
INO80C
PMAIP1
COMMD6
UCHL3
METTL11B
URB1
AURKB
NPC1
METTL1
EEF1AKMT3
GRWD1
DIMT1
TRAPPC6A
BLOC1S3
DPH1
C16orf71
ANKS3
CCNB1
BUB1B
OSBPL1A
DMAC1
RPS3A
C12orf66
AP1B1
PNO1
UNG
KPNA2
CYP21A2
LAMP1
SASS6
MRPS33
DHDDS
CCT2
TRMT61A
TSACC
CCT3
DIAPH3
MARCHF7
TBC1D4
RBM19
FANCI
TTC27
TXNL4A
RBFA
SECISBP2
TTI1
RPRD1B
NUP35
THADA
MEA1
WDR74
GPATCH4
ZNF778
PTPRD
CCDC86
APOM
PUM3
BAG6
MRPL27
EME1
SLF2
AEN
TOM1
CDC16
RNF125
NCAPH
TFB2M
CNST
ING5
KIF2C
PBK
PAX9
POU2F1
ENDOV
GTPBP4
TIMM9
KIAA0586
ZFPL1
CDCA5
ZNF24
SLX1B
SLX1A
BOLA2
BOLA2B
FBXO5
NBPF1
CLSPN
ADAT1
ATP6V0D1
ESCO1
USP32
VPS41
ITGB3BP
EFCAB7
DDX42
CCDC47
KIF14
PSEN2
CHEK1
ASPM
METAP1D
MAK16
RRP12
EDC3
TAF13
AIP
TDG
CCNA2
NOL6
TCF4
CCNB2
MRPS36
TAF1A
PLEKHD1
SSR2
BMP8B
NASP
ZNF276
VPS9D1
AP2S1
OBI1
PSME3
CCDC15
PAXBP1
ACYP1
ZC2HC1C
HEATR1
CEP135
AP1S1
KAT5
OGDH
CFAP53
TMEM186
PMM2
RBKS
BABAM2
BLM
VMP1
PTRH2
WWP2
DZIP3
CIP2A
ADPRS
SUGP2
ARMC6
DHX33
POLR2M
DNMT3B
HSPA12A
ENO4
ZNF148
HAT1
CNDP2
TTK
RUVBL1
MXD1
SNRPD2
QPCTL
ZBTB37
CKAP2L
DDX19A
NUDCD1
RANGAP1
FAM72B
CENPH
EIF2B3
ABCF1
GAR1
MPND
PHB
RBBP8
RIOK3
RAD51
GMNN
LIG4
HDHD2
RFC5
TRMO
FH
LSM14B
FBXO28
MRRF
FAM234B
COMMD4
TOP3A
SMCR8
C6orf89
MOK
UQCRC2
TXLNA
PUS1
ATP5F1A
TMEM248
VPS33A
MIS18A
NR6A1
SHC1
CKS1B
CNPY3
TRAPPC8
CDCA3
SP4
NAGPA
SSBP1
ACYP2
YIPF3
POLR1C
RPUSD4
FAM118B
SPNS1
AIMP2
PMS2
ZSCAN25
INO80
CASP7
ZFAND2A
CCNG2
PIGU
SMC2
TRIP4
DDX10
DEPDC1
ISG20
WDR26
PSMD7
COL9A2
DPY19L4
ACOX3
RPIA
CENPN
RMC1
PHF21A
NRL
DCAF11
SRD5A1
NSUN2
HSCB
CHEK2
IBA57
MTFR2
CARS2
ZNF23
CENPBD1
UBFD1
EARS2
ZGRF1
LARP7
PRCP
DDIAS
PCNP
VPS26B
NCAPD3
PDCD2L
RPS19
SNRPE
ASNS
URB2
TAF5L
NAP1L4
DTNA
CWC25
PTPN4
KLHL12
ZBTB49
LYAR
FAM183A
CHAC1
SLC25A17
SCFD2
USP30
VPS35
PELP1
DIS3
DCUN1D2
BOLA2-SMG1P6
NAGK
NLE1
RNF115
POLR3C
NARS1
SLC38A7
GTF3C4
DDX31
HSPBAP1
SZT2
MED8
SLC49A4
TMCO1
CABYR
IMP4
CCDC115
RNF40
CCDC189
SHCBP1
XPO5
POLH
C18orf25
RPS29
RFC1
MVK
POLD3
ARMC2
PEX19
TAF4B
MMS22L
GNPAT
C1orf131
RTRAF
NOL8
CENPP
GCDH
PFKM
ZNF408
ARHGAP1
COQ10B
SRCAP
LOC730183
PSMB10
KLHL18
KIF9
C16orf46
FAM200B
TK1
AFMID
NIP7
COG8
RANGRF
UBAP1L
TMEM242
ATR
WDR46
PFDN6
MCRS1
SCRN3
CIR1
POC5
KIF23
RPS8
METTL3
IFT57
MIEF1
RETNLB
UFD1
CDC45
POLQ
NDUFAF6
CCNE2
FAM136A
CCDC39
CRELD2
ALG12
KIF18B
SWSAP1
KCTD9
CDCA2
PACRGL
TASOR2
EPHB1
ADAM17
LAP3
RRM2
S100A13
VPS11
CHTOP
SLC39A6
ELP2
TTC23L
PIGW
MYO19
PIPOX
GATB
WDR4
PMVK
PALB2
EEF1AKNMT
DCTN5
DMAC2
RAD9A
ZBTB17
TCTN2
TTC31
CCDC142
MRPL24
MRPL42
WDR61
FKBP1A
RNH1
LUC7L
MRPS21
HASPIN
ACTR3C
LRRC61
UBE2Q1
PPIH
LAMTOR5
PRPF38A
ORC1
GSN
RAB14
SMYD5
DYNC2I1
DARS2
CENPL
SRPRB
ZNF331
ARHGEF7
POLR2C
DSE
TSPYL1
POLR3H
NAT10
ZNF202
SS18
PIAS3
RNF138
ZNF77
USP35
KCTD21
IPO4
TRMT6
MCM8
NMNAT1
LZIC
PPAN-P2RY11
PPAN
ZFYVE1
SLF1
KIAA0825
SMG5
PLK1
ARL14EP
CFDP1
MUL1
LACTB
UBR7
GON7
IVD
RPS27L
AMZ2
ATP6V1C1
SLC35A3
MCM10
GTSE1
ACBD3
TTC7A
MCFD2
TWNK
MRPL43
ZNF549
NOL10
FBXW8
DHODH
VPS4B
MOB3A
IZUMO4
POLA2
EPHX1
NOC3L
APRT
ADCK1
CUL4A
STYXL1
MDH2
PCID2
SLC38A10
NIPSNAP3A
NPHP1
WDR62
THAP8
RIOK1
CAGE1
FBXW9
SRP54
GPAM
USP37
E2F3
CNOT9
RPF2
LRIG2
CHUK
MAEA
RPE
MCTS1
IREB2
KLHL32
NDUFAF4
DDX11
WDR3
GDAP2
YAE1
MAPRE2
IFT172
TMEM231
MFSD5
RPGR
LRFN4
MATN3
DNAJC25-GNG10
DNAJC25
DCT
EXOSC3
CDC20
POLI
VAC14
PDE8A
APTX
PTCD2
MRPS27
SERPINB8
DNAJA1
LPP
TMEM109
E2F2
PRMT2
TFIP11
ARHGDIA
LRRC49
THAP10
ACADM
TXNL4B
DHX38
CKS2
POLR2J2
MTO1
RIC1
RAB4A
NME1
RNF166
CTU2
ZSCAN30
CDC37
SPATA33
AP1G1
SEC11C
PIK3C3
IARS2
KIAA2026
C12orf45
IER3IP1
HK2
TMEM9
UMAD1
MRPL33
CTH
RAMAC
PRDX6
MRPL15
ROCK1
CIART
ACAA2
CAND1
TAF6L
ICE2
BNIP2
ZNF571
ZNF540
ENOX2
PLRG1
FANCD2
RCL1
ERI1
DPH2
SETD6
CCDC9
HAUS1
LRP2BP
ANKRD37
EPRS1
DNTTIP2
XRCC2
EFTUD2
CCDC103
C18orf21
CEP162
ATP6V1H
HEATR5B
GPATCH11
PPP1R12B
CEP126
TEX10
GALE
WBP2
MBD1
C22orf39
UTP14A
TAPBPL
BLOC1S1
DCP1B
CHMP7
TIGD4
ARFIP1
MTHFD1
WASHC5
NSMCE2
KYAT1
LSG1
LYRM4
FARS2
BRCA1
GABPB2
SNAPC5
SPTLC1
C15orf61
PDCD11
ATP5MD
RSL24D1
LRRC8A
DYRK2
PRIM1
POLR3F
DZANK1
POLR1B
ADPGK
SLC25A32
DCAF13
SETDB1
DST
TOM1L2
DRC3
TMEM19
TROAP
RBM7
C11orf71
ING4
RPAIN
NUP88
KIFAP3
GOT2
TMCC1
JRKL
CCDC82
SMPD3
SLX4
PHOSPHO2-KLHL23
PHOSPHO2
CCDC173
WDPCP
MDH1
SKA3
MRPL57
ZNF497
UTP15
ANKRA2
ZNF696
CEP43
ALG9
CHRNA9
MFSD1
CYRIB
VARS1
FARSB
MDN1
DLGAP5
TIPIN
TSNAXIP1
RANBP10
ZNF598
MAP3K13
COMMD5
NPL
ARHGEF39
LMAN2L
CFAP298-TCP10L
CFAP298
WFDC3
DNTTIP1
EIF3C
EIF3CL
SYPL1
PTK2
TBC1D15
SCAMP3
FAN1
UBN2
NRAS
RASAL2
MBD2
CCDC113
SIPA1L2
LIN37
RGS16
ZCWPW1
MEPCE
INTS7
DTL
RPA2
KNTC1
RTEL1
TRAPPC4
RPS25
DCLRE1C
GFUS
RPGRIP1L
FTO
YRDC
C1orf122
UTP3
DYRK1B
VPS37C
MRM1
ZKSCAN8
H3C15
H3C14
NELFB
HSP90B1
KIAA0319
MELK
KDM4C
PICK1
ESRP1
NDUFB3
FAM126B
PPIL4
WDR53
FBXO45
PPM1H
CNPY2
RANBP6
C12orf43
BUB1
STMP1
BLOC1S2
UBAP2
MTHFD1L
SLC30A1
PIAS4
LSM1
BAG4
MTAP
TFDP1
IGBP1
GTF3C3
GTF2H3
EIF2B1
EBNA1BP2
CFAP57
MRPL30
MITD1
XRN2
PRR3
CDC25A
GNL1
DHX16
STOML2
MSTO1
NME7
BLZF1
CEP170
SDCCAG8
PIF1
POLL
DPCD
HNRNPH2
GLA
ZNF219
CES2
CIAO2B
COX19
LIPG
TIMM17A
CRKL
TOP3B
CZIB
MRTO4
EMC1
HAX1
BIRC6
SFXN2
ARL3
NUDT5
CDC123
TMEM198
CHPF
LOC390877
GTF2F1
TMEM234
EIF3I
ALG8
PMF1-BGLAP
PMF1
ITPA
TTPAL
MYO9B
HAUS8
JUP
RAI14
ZFP90
YARS1
S100PBP
KIAA0895
CDC25B
G6PC3
DUS2
DDX28
GRN
ANLN
SERP1
EIF2A
DDX19B
POLR1F
KNOP1
MTMR2
B3GAT3
SETD4
DNMT1
SMG1
SMAD2
IPO9
AP1S3
SLC10A2
NEK2
SLC12A9
KNL1
LRRC59
SLC24A1
AAR2
VPS45
BLOC1S5
INTS9
HMBOX1
PIN1
OSGEP
APEX1
JAK2
KLHDC4
EXOSC6
RASGRP3
EIF6
CENPE
LINGO1
MAK
STRA6
EFCAB6
SH3GL2
RBBP5
TATDN3
NSL1
GFM1
USP2
MTR
RABGEF1
GTF2H2C_2
GTF2H2C
ARFGAP2
SNRPG
RPUSD2
PCCA
NDUFAF2
ERCC8
COQ5
TUBE1
FAM229B
PSMA4
DDX47
BCAS3
NSUN4
POLR3B
DDX21
RECQL
GOLT1B
MMUT
CENPQ
AKR1A1
ERAL1
GPR89A
TBC1D22A
TRIP12
FBXO36
DGUOK
ORC2
NARS2
UPF3A
FAM174A
SLC25A44
ZWILCH
RPL4
NMD3
ZNF606
LDHB
XRCC6
DESI1
SRP72
NCOA7
MAP3K7
DLAT
RBM34
CMTR2
DCPS
PIGC
CCDC57
ULK3
OSCP1
ANK2
LMO7
NDUFS3
KBTBD4
POLG
ABCB10
TSG101
VPS37A
CNOT7
ZHX1-C8orf76
ZHX1
SRSF2
MFSD11
TSR1
SGSM2
SMARCA5
ZNF658
USP21
ZBTB24
LAGE3
MRPL21
IGHMBP2
TBC1D30
GNS
SDAD1
PDAP1
BUD31
ZNF2
TRMT5
SLC38A6
SF3A1
CCDC157
PRMT3
COX8A
RFC2
IFRD2
SCO1
ADPRM
USE1
SLC30A7
AKR1B1
GOLPH3L
PHTF1
UBA6
EIF2AK1
EXTL2
RCCD1
YAP1
DPY30
PRPF38B
SF3B4
SNX27
XPNPEP1
ATG14