ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3010110 | A549
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX16386913: 293

◣ SRX3010110: A549

◢ SRX3010111: A549

◢ SRX24188777: BJ

◢ SRX24188786: BJ

◢ SRX20550182: BT67

◢ SRX20550183: BT67

◢ SRX20550184: BT67

◢ SRX20599715: Caco-2

◢ SRX20599717: Caco-2

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX10616096: GM12878

◢ SRX10616097: GM12878

◢ SRX11374678: GM12878

◢ SRX11374679: GM12878

◢ SRX3322296: GM12878

◢ SRX3322297: GM12878

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX10478224: Hep G2

◢ SRX10478225: Hep G2

◢ SRX2423815: Hep G2

◢ SRX2423816: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX2023732: iPSC derived cardiac cells

◢ SRX2023764: iPSC derived cardiac cells

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX2423402: K-562

◢ SRX2423403: K-562

◢ SRX5457481: K-562

◢ SRX5457482: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX8064823: Lymphoblastoid cell line

◢ SRX8064824: Lymphoblastoid cell line

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX11399800: NCI-H1963

◢ SRX11399801: NCI-H1963

◢ SRX11399802: NCI-H1963

◢ SRX9779520: NCI-H1963

◢ SRX4732741: Pre-B cells

◢ SRX7981741: Prostate cancer

◢ SRX7981742: Prostate cancer

◢ SRX7981743: Prostate cancer

◢ SRX7981744: Prostate cancer

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX9562892: RH-4

◢ SRX9562897: RH-4

◢ SRX19212560: SK-N-MC

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

SNX16
MTRNR2L2
MTRNR2L8
WDR74
CCDC200
NAGPA
UBE3B
KCTD10
VPS37D
PPWD1
CENPK
MRM3
GLOD4
ZNF830
CCT6B
GTF3C5
SGSM1
SFSWAP
SAP30BP
RECQL5
ATG14
TIMM9
KIAA0586
OSCAR
NDUFA3
ATG16L1
NR6A1
RFX1
EOMES
COPS7B
NPAS4
MAIP1
PIGBOS1
PIGB
ARHGAP45
TOP3A
SMCR8
SMG8
TMEM199
POLDIP2
CDK1
DRG2
C8orf33
CRBN
IDH3B
BIRC5
ITGB3
NUF2
SUSD5
PAK4
CPPED1
RRM2
TMEM101
ZNF335
PDLIM7
ESCO2
DZIP3
CIP2A
NCAPH
RTN4RL1
HAGH
FAHD1
GRWD1
ZCCHC14
DDX23
CHST12
ZFPL1
CDCA5
PLK4
UBFD1
EARS2
MRPL11
EIF2D
NEK2
POLQ
PSMD9
HPD
PELP1
SUMF1
U2SURP
SFRP5
PSMB7
NAE1
HOXA7
AHCY
KIF20A
BRD8
NUCKS1
TOMM22
FXN
KITLG
ARHGAP44
SPNS1
SEMA4B
SLC47A1
TCTN2
NGDN
MED6
ZNF331
CYLD
GET3
SLC29A3
IQGAP3
TICRR
TIMM22
FANCD2
CACTIN
BRCA1
EXO1
TRIM26
DEPDC1
STK25
SYNJ2
NEFL
TRMT1
PRCP
DDIAS
NOM1
PTPRA
SLC27A2
GALR2
TSEN54
CASKIN2
SWSAP1
NUDT8
ERAL1
VPS50
HEPACAM2
CDC6
PEPD
SPOP
CDC25C
FFAR4
TTC31
RPTOR
CCDC142
YEATS4
TSR1
SGSM2
COMMD9
SGO1
MTBP
MRPL13
PRKCQ
UTP20
CCDC22
SF3B3
COG4
SETD1A
NR2C1
NEURL2
CTSA
DMAC2
XAB2
KXD1
GPATCH3
TROAP
SOGA1
SMPD4
MZT2B
NLRX1
TFPT
PRPF31
UBE2Q1
ZCCHC7
TKT
KIF16B
RBM42
COASY
SKA1
GTSE1
SLC38A10
NPPC
ELP5
CTDNEP1
TRAPPC2L
GALNS
SGO2
FANCI
VIRMA
CENPF
FAM111A
MRPS15
FAM72C
FAM72A
METTL14
PLD3
C19orf47
RBM48
PEX1
CCNA2
PBK
AIP
CCDC58
PPIL4
P2RY1
RAD54B
LDLRAP1
TRIP4
EIF3F
STIL
TMC6
UBE2O
AANAT
RNF130
ZC3HC1
IQGAP2
RPUSD4
FAM118B
BLVRB
FBXL19
SPATA2
MRPS35
ATAD5
RBM19
ABCC3
ZDHHC24
ACTN3
POFUT1
PLAGL2
TCIRG1
NTAN1
TTK
ATP5MF-PTCD1
ATP5MF
TTC38
RAB20
RRP15
FAM72D
AURKB
PPT1
SPHK2
RPL18
GATB
MRPL45
EIF3H
FGF18
ZCWPW1
MEPCE
VSTM2L
ARHGEF1
SHCBP1
CSTF2
MRPS7
GGA3
HOXD11
WASHC2C
DSCC1
GTF3C3
TMEM242
KPNA2
EHBP1L1
MTFR2
ASPM
POLR3F
DZANK1
KANK2
TCF3
CYB5B
NUP160
TSR2
ADA
HTR5A
GSN
RAB14
XKR7
IQSEC3
TDRD7
CPLX2
GBA
CAMTA1
ZNF555
NBPF1
CYB5R4
POLR2J3
PAXBP1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
NDUFS7
NME1
CRNKL1
CFAP61
SLC35A4
APBB3
UTP25
TIPARP
ZNF77
ARCN1
KCTD18
ZMPSTE24
PDE4DIP
CCDC107
NUP214
RNF187
HEXA
LAMP1
YJU2
TMEM248
VPS33A
WASHC2A
STX16
HPCA
RPS19
IBA57
QTRT1
SCFD2
POLR3H
SSBP1
DHDDS
WASHC5
NSMCE2
TTLL4
P4HA1
CELSR3
ZEB1
METAP1D
BARHL1
TRMO
RAB37
GSTA4
CALR
ITGB3BP
EFCAB7
SNAP25
SLC39A3
TTC26
FBRS
PWWP2A
USP35
KCTD21
RBBP5
MARCHF4
TDRKH
METTL1
EEF1AKMT3
DCUN1D2
CCNG2
RABL2B
SOD2
IPO4
H4C8
CHGB
EPHA10
TPH2
COMMD2
NOL8
CENPP
TIGAR
NFE2L2
NBPF15
LARP1
WDR4
TIMM17A
FAM227B
DTWD1
RPS29
CDK7
SARS1
BNIP3L
KAT5
SLX1B
SLX1A
BOLA2
HIBADH
SVOP
BOLA2B
SUPT7L
SLC4A1AP
SF3A3
MTF2
HMGB1
CASC3
WTAP
TRUB2
COQ4
SEC31A
COMMD4
N6AMT1
EIF1AD
BANF1
KLHL18
KIF9
PI16
CBWD5
PSME3
SLC12A9
RTTN
WDR36
SLC45A4
LUC7L2
KNL1
NUP107
PAFAH2
CBWD3
THAP9
TXLNA
CBLL1
MIS18A
METTL25
CCDC59
NDUFS3
KBTBD4
CCDC88A
MRPL27
EME1
H4C14
KDM3A
CDK5RAP1
EBAG9
BLOC1S1
FNBP1
SMYD5
POLG
RTF2
L1CAM
MFSD1
PRRC2B
INTS12
GSTCD
KLHL22
DHX40
BCAS3
ATR
ASF1A
NSUN4
VTA1
NMBR
DNAJC5
BOLA2-SMG1P6
YTHDF2
YARS1
STAM2
NUDT15
NEIL3
MAPK8IP2
CRKL
PEX3
ADAT2
ZNF684
PLEKHM3
UTP11
RBM28
CSTF1
AURKA
TRAPPC6A
BLOC1S3
SLC25A51
USPL1
C8orf37
MTRNR2L9
TSFM
TBRG4
NRL
DCAF11
RRP12
PDE4A
POLR3B
OGDH
DDX18
KLHL20
S100PBP
UBE2L3
MRPL40
HIRA
C16orf71
ANKS3
NOP16
HIGD2A
MRPL44
MTIF2
HUS1
CCDC146
ATL3
STAT3
NOS3
KIAA1586
E2F6
FMC1-LUC7L2
C12orf66
STX18
LRRC29
HNRNPD
NUP35
RFC1
FBXO5
CKAP2L
CWC25
ATP6V0D1
CMSS1
NAGK
PGAM5
TRIAP1
KIAA0895
DPY19L4
FBXL13
ARMC10
QTRT2
CCDC191
USP54
TOP3B
VIM
ABCB8
GTF2H3
EIF2B1
POLR3E
MED23
INTS7
DTL
CCDC86
SNRPE
ACVR1
GOLGA7
SUPV3L1
SASS6
LRRC59
TRMT6
MCM8
TTC27
CENPS-CORT
CENPS
COX16
CCDC106
RAB11A
NDUFAF5
ESF1
TFB2M
CNST
PGBD5
ADPRS
CBWD6
PMVK
PUS10
PEX13
LTV1
EBNA1BP2
CFAP57
RGL1
PFDN4
EDC3
PIKFYVE
UTP3
GDAP1
TBC1D19
SLC24A1
GTF3C4
DDX31
SSNA1
ANAPC2
PHOSPHO2-KLHL23
PHOSPHO2
CCDC173
NOL6
HDAC2
OPA1
ZC3H15
DNAJC25-GNG10
DNAJC25
URB1
P2RX6
CFAP298-TCP10L
CFAP298
SACM1L
RAD51
ARPC5
PCIF1
TFB1M
GPATCH4
NAT10
PIGU
GTPBP10
GTF2H4
CFAP54
C5orf51
FAM228B
TMEM186
PMM2
CDC73
PRMT2
CCNL1
H4C15
PPIL2
AIMP2
NMNAT1
LZIC
NLE1
TOMM40
RABGAP1L
HEATR1
TSR3
GNPTG
EXOSC5
BCKDHA
NOTCH2
DCLRE1B
AP4B1
TMEM41A
TACO1
THAP7
FMC1
DHX37
RABEP2
TATDN3
NSL1
NUP54
RGPD2
RGPD1
TTC21B
FAM133B
SIRT4
AP1M1
IREB2
CNOT4
WDR46
PFDN6
RBKS
BABAM2
ARFGEF2
NOL7
POLR3D
FAM98B
SECISBP2
MRPS23
NCOA7
YIF1A
TSN
TEFM
KIF18B
ATP5F1E
ING3
KLHL32
TIGD1
EIF4E2
MTERF4
KIF15
KIAA1143
GOLM2
SMIM12
CAP1
ZNF558
UFD1
CDC45
RUVBL1
PPP6R1
APOM
GATAD2A
PAK1IP1
FAM72B
C6orf52
MRPS33
TRMT61B
PUM3
CLK3
SRSF11
CDC25B
PMS2
ACVR2A
PNO1
GCDH
RPS27L
SELENOH
GFM1
MMAA
GON4L
USP2
RLF
STAT1
INTS5
BNIP1
SLC25A26
CEP135
MIA3
TAF13
TAMM41
POM121
MRPL48
RPAP3
DCT
TMEM222
MRPL30
MITD1
C16orf87
DSTYK
ZGRF1
LARP7
EIF2B3
BCAR3
VPS26C
RPS7
TBP
PSMB1
PARL
H4C3
PTPN4
CFAP299
ANKRD12
CYRIB
NOL10
NTAQ1
SF3B6
LRP2BP
ANKRD37
MRPL1
SLC33A1
GLRA1
MCM7
AP4M1
PRMT5
PFKM
WDPCP
MDH1
FAM98A
RIMBP3B
TFIP11
ZNF165
AAR2
ABCB6
PSMD3
PGK1
ARHGDIA
INO80B
PRAME
ATAD2
DDX41
KLHL12
POU2F1
WDR11
VPS45
BLCAP
RPL27
POC5
H6PD
DNAJC11
TMED1
PARP2
RRS1
SUGCT
MPLKIP
TSGA10
TMEM181
SNX17
G6PC3
EIF2B4
CCT2
OXNAD1
DPH3
SYNJ1
RBL1
ESYT2
C2orf42
CZIB
KIF2C
ZBTB45
KDM1A
DUS2
DDX28
MRPS18C
HELQ
AGBL3
RAD54L
INO80C
GRN
ACOX3
SLC35B1
C6orf89
RIMBP3C
SKA3
MRPL57
YDJC
RHEBL1
BOD1
WDR62
THAP8
SMN2
SMN1
DPP9
RTN4
XRN2
PPIP5K2
NADK2
DUS3L
VPS29
RAD9B
PIH1D2
NKAPD1
PCNA
DCAF10
SCNM1
LYSMD1
LRRC37A3
IMP4
CCDC115
TARS2
STX6
SKIV2L
NELFE
RPA2
FBXO48
APLF
MRPL21
IGHMBP2
PPIH
AP5Z1
RIOK1
CAND1
CAGE1
GFM2
C16orf46
DDX21
COPS4
HCFC2
GLT8D2
RC3H2
YBEY
KYAT1
TRIT1
MARCHF8
IPO11
PALB2
NOC3L
RNASEH1
COMMD1
ZSCAN22
LSG1
MOB4
SMG7
FAM207A
UNG
DPF1
ZNF473
VRK3
CALM2
PLS1
MTR
IL1R1
TXNDC9
DYNC2I1
RAD54L2
SLC35A5
ATG3
POLR1B
HBP1
FBXW8
RNF166
CTU2
BAG6
EPRS1
SNRPC
GALK2
CLSPN
SEC13
SEC11A
LAMTOR5
MRPL39
EEF1AKNMT
CLUAP1
TAF6L
PPM1B
EIF5B
FAM117B
S100A13
NUP155
DDIT4
ATG5
KDM2A
DNAJB4
PLK3
POMZP3
MRTO4
EMC1
MRPL3
RBM8A
TRAPPC9
SNRPB2
ELF1
TTI2
WFDC3
DNTTIP1
LZTR1
CFAP20
ENDOV
RBM45
SLC44A1
ZNF721
PIGG
SMIM30
RPP40
DCTN5
WBP4
DMAP1
LTN1
ACTR6
REXO4
SHC1
AARS2
RAPGEF6
USP16
SH2B1
BBS5
NBN
DDX19A
FAF1
TOR1A
ERMAP
TMEM9
KCTD9
CDCA2
MAN2C1
PTRHD1
CENPO
HSPA9
IGF2BP3
COPS8
USP30
TIMM10
CCNB1
NDUFAF4
ANKRD36C
IPO13
HPS4
DIABLO
TCP11L2
MIS18BP1
FAM156A
AMZ2
PRPSAP1
GFI1B
TMEM230
IFT46
DPH1
CYB561D1
TBC1D30
JMJD1C
SYT11
SMARCD2
CKS1B
ACBD6
GLT8D1
HAX1
ZNF408
ARHGAP1
FOXJ3
DDX59
ABCF1
SLF2
NUDCD3
ZAR1L
DCP1A
BRCA2
TMEM259
SEPTIN9
DNTTIP2
NDUFB3
FAM126B
ZDHHC12
DNAJB12
XRCC2
THADA
MRPS28
SRRD
KPNB1
CDT1
THEM6
NUP42
C12orf73
RBIS
BSDC1
MTDH
MPHOSPH10
MCEE
NPPB
OAZ3
CAST
ADPGK
ILF2
DIMT1
RPIA
RABGEF1
RIOK3
POLR2J
DDX1
B3GALNT2
RBSN
DNPEP
ANLN
CERCAM
TTC3
RING1
PCM1
TBL3
PC
ZCCHC4
LRRC49
UMAD1
TVP23B
CTCF
MOK
PPIL1
RAD18
PPP1R11