ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11399800 | NCI-H1963
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX16386913: 293

◢ SRX3010110: A549

◢ SRX3010111: A549

◢ SRX24188777: BJ

◢ SRX24188786: BJ

◢ SRX20550182: BT67

◢ SRX20550183: BT67

◢ SRX20550184: BT67

◢ SRX20599715: Caco-2

◢ SRX20599717: Caco-2

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX10616096: GM12878

◢ SRX10616097: GM12878

◢ SRX11374678: GM12878

◢ SRX11374679: GM12878

◢ SRX3322296: GM12878

◢ SRX3322297: GM12878

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX10478224: Hep G2

◢ SRX10478225: Hep G2

◢ SRX2423815: Hep G2

◢ SRX2423816: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX2023732: iPSC derived cardiac cells

◢ SRX2023764: iPSC derived cardiac cells

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX2423402: K-562

◢ SRX2423403: K-562

◢ SRX5457481: K-562

◢ SRX5457482: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX8064823: Lymphoblastoid cell line

◢ SRX8064824: Lymphoblastoid cell line

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◣ SRX11399800: NCI-H1963

◢ SRX11399801: NCI-H1963

◢ SRX11399802: NCI-H1963

◢ SRX9779520: NCI-H1963

◢ SRX4732741: Pre-B cells

◢ SRX7981741: Prostate cancer

◢ SRX7981742: Prostate cancer

◢ SRX7981743: Prostate cancer

◢ SRX7981744: Prostate cancer

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX9562892: RH-4

◢ SRX9562897: RH-4

◢ SRX19212560: SK-N-MC

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

PPT1
ZMPSTE24
ZNF684
CAP1
SKA1
PPIE
TRIT1
EXO5
UTP20
RLF
MRPL45
RPS29
RABL2B
HPCAL4
TRMT1
IQGAP3
NT5C1A
CDK7
MYCL
SHCBP1
SSH2
CRNKL1
CFAP61
RAD51
QTRT1
NUF2
MFSD2A
TRAPPC6A
BLOC1S3
DHX37
POLR3D
NCAPH
UTP25
C12orf66
DIAPH3
BMP8B
WDR7
ATP6V0D1
MOK
FAM72C
FAM72A
ADAT1
PSME3
GRWD1
PAX9
RTTN
MTFR2
HSPA12A
ENO4
SEMA3C
SPACA1
PMAIP1
LAMP1
TRMT61A
RRP15
C16orf71
ANKS3
HEATR1
BIRC5
DZIP3
CIP2A
GPATCH4
WDR74
ZNF24
WDR4
AP1S1
PUM3
NBPF1
FAM72D
TIMM21
FBXO15
SLF2
ATP5F1A
HAUS1
NEURL2
CTSA
CDC20
CORO2A
CFAP299
BLM
METAP1D
CCDC102B
TMX3
EXO1
ACVR1
PHB2
FANCI
RIOK3
CDC16
ZCCHC7
SRCAP
LOC730183
FBXO5
UFD1
CDC45
KIF23
RBKS
BABAM2
URB1
SCFD2
KPNA2
UNG
ZGRF1
LARP7
KIF2C
SMYD5
PNO1
DPH1
COMMD6
UCHL3
UTP4
DERPC
CHTF8
METTL11B
TMEM241
AURKB
MIS18A
TICRR
APRT
DMAC1
KATNAL2
TTK
WWP2
LYRM4
FARS2
PLEKHD1
RBM19
EDC3
FAM200B
AEN
GTF3C4
DDX31
CKAP2L
TRAPPC8
NOL6
VPS4B
SLX1B
SLX1A
BOLA2
BOLA2B
BOLA2-SMG1P6
HDHD2
METTL1
EEF1AKMT3
TOM1
WDR26
ZNF77
POU2F1
NEK2
TTC27
TFB2M
CNST
CCT2
NPC1
SLC25A17
CENPS-CORT
CENPS
CFAP53
CCNA2
PRR3
GNL1
FBXW9
MZT1
BORA
RPRD1A
ARMC2
COMMD4
TAF13
AIP
NUDT2
KIF24
RBBP8
CKS2
RNF125
CYP21A2
USP37
CNOT9
CCNG2
TMEM186
PMM2
TRAPPC2L
GALNS
ATL3
LRRC49
THAP10
NKX2-1
CEP135
MRPL1
VPS33A
DSEL
COL9A2
HEXA
BLOC1S1
MYDGF
IKBKB
USP2
KIAA0895
ANLN
TAF4B
MRPL11
GBA
FAAP24
CEP89
KAT5
PIK3C3
GUSB
TIMELESS
PPP1R10
MRPS18B
KIF22
AP1B1
STAM2
MRPS33
MCM10
TBC1D4
MRM3
GLOD4
CCDC86
RPS3A
WASHC5
NSMCE2
DDX5
CEP95
PEX19
RETNLB
NTAQ1
CLSPN
STK36
RNF25
PCCA
ZNF558
MCRS1
VPS41
ZNF408
ARHGAP1
CYB5R4
TIMM9
KIAA0586
TROAP
E2F3
BCAS3
FAM183A
FAM72B
CCNB1
SLC38A8
SH3KBP1
RNF138
PMVK
AIMP2
PMS2
POLR1B
WDR61
DPH2
ADPGK
SLC39A6
ELP2
CDK18
DCUN1D2
SLC12A9
CLK3
ZNF778
RBL2
ZFPL1
CDCA5
TOMM70
LNP1
NKX2-8
C16orf46
NAT10
POLR2J2
ADSL
LETMD1
QTRT2
CCDC191
ESCO2
POLQ
SUGP2
ARMC6
RFX5
VPS26B
NCAPD3
RFWD3
HUS1
NME7
BLZF1
RPS27L
DDX19A
INTS9
HMBOX1
RMC1
TRIP4
METTL18
C1orf112
PTPRD
MRPL27
EME1
SHC1
CKS1B
PDP2
CLYBL
C6orf89
HROB
SPG7
SECISBP2
STK11IP
TBC1D16
CCDC40
PBK
MAK16
SMC2
MBD1
TAF6L
MSH3
DHFR
NOL10
NOC3L
PTPN4
CENPH
SFXN2
ARL3
CDC25B
VPS11
CLN5
DHODH
SPG21
ING5
WDR3
GDAP2
HSPBP1
UPF3A
DIS3
RPTOR
KIF18B
RPUSD4
FAM118B
CCDC146
DLGAP5
ARL13B
ZBTB37
TAF1A
USP35
KCTD21
TFIP11
FAM161B
COQ6
ASPM
EBNA1BP2
CFAP57
GLE1
NOB1
WDR18
VTI1B
DIRAS2
MYBBP1A
EFCAB6
GPX4
CHRNA9
PSEN2
ERCC5
LEMD3
PIF1
RNF187
PSMD9
HPD
NUP35
SPNS1
MCOLN1
PWP1
ZNF594
GEMIN6
CCDC39
SF3A3
KNL1
SGO2
THADA
MRPS28
MPND
HASPIN
ZNF598
PIPOX
F11R
SCRN3
CIR1
TXNL4B
DHX38
UQCRC2
RCL1
ESPL1
COMMD5
RPL17-C18orf32
RPL17
MFSD1
IPO11
FKBP1A
RPUSD2
KIF14
UTP11
RPP40
TBC1D30
GNS
PACRGL
CENPN
LHFPL1
RFC1
PPIH
RIOK1
CAGE1
PRPF38A
ORC1
GAR1
ALKBH8
GTSE1
PPIB
CXXC1
SASS6
PISD
CASP7
POLN
HAUS3
DHX40
RRP12
LACTB
ERCC3
MTR
MRPL24
TTC23L
TM9SF1
TAF1C
CNDP2
BCL9
RGS8
TXLNA
LRRC29
VAC14
DYRK1B
KLHDC4
DYRK3
IER3IP1
ADPRS
PRCP
WDPCP
MDH1
DDIAS
SMG5
ISG20
NOP9
DHRS1
STYXL1
MDH2
TSACC
CCT3
SP4
MND1
ZNF396
TSTD1
DHDDS
TRUB2
COQ4
GLT8D1
ZSCAN30
SPCS1
SRD5A1
NSUN2
TOP3A
SMCR8
RRS1
SWSAP1
YIPF3
POLR1C
CHST12
TWNK
MRPL43
GCSH
SMAD2
PIGU
POP7
ACADM
MELK
MCM5
DGKB
IREB2
SCNM1
LYSMD1
RNF166
CTU2
RPF2
ZNF202
COQ9
CIAPIN1
PDE11A
SPATA4
SLC35A4
APBB3
RANBP6
GATB
CNPY3
CARS2
PDE8A
AP2S1
ANAPC7
NPL
WDHD1
SOCS4
ARFGAP2
NEMP1
MAP11
CEP295
SSR2
ZNF587
C21orf58
TMEM9B
CCNB2
RNH1
ENOX2
PCNT
MBIP
SNRPA
PDCD2L
C19orf54
EHMT1
IPO4
TTF2
CDIP1
RNF40
CCDC189
MED20
BYSL
MDN1
MAPRE2
UBE2C
ATP6V0A1
NUP107
WDR46
PFDN6
FAM98B
DIMT1
LMNA
TMEM260
SENP7
CRELD2
ALG12
MEX3A
TRMT6
MCM8
NIP7
COG8
INPP5K
BAZ1B
FAM234B
POLR2J3
NSFL1C
INO80
RAB36
DAD1
SOCS3
ST8SIA3
WDR62
THAP8
DNMT3B
TMEM234
EIF3I
DPP4
KXD1
E2F6
ACOX3
FBXW8
SLF1
KIAA0825
TMED5
CCDC18
PRIM2
ZSCAN29
TUBGCP4
ABHD3
GPATCH3
XRN2
PIGO
GFUS
SF3B4
PARP9
DTX3L
FBXO43
UBE2Q1
EIF3C
EIF3CL
SLC7A6OS
PRMT7
ZNF276
VPS9D1
FCF1
AREL1
MRPL12
NCKAP5L
SNX19
DTX2
EXOSC5
BCKDHA
ACTR6
SERP1
EIF2A
RSPH3
SZT2
MED8
CFDP1
DOLPP1
ORC2
NUDT1
MRM2
ACYP1
RCCD1
PFDN2
NIT1
C18orf32
SMYD3
ZC2HC1C
VPS35
SLC35A3
SDE2
ZWILCH
RPL4
LRP2BP
ANKRD37
INO80C
C18orf21
SCAMP3
GINS3
ARL2BP
SLC35B2
CEP128
DENR
GOLPH3L
RAVER1
NAGPA
CDK5RAP3
CEP162
MRM1
NCAPH2
LMF2
TPGS2
CHAC1
LSM1
BAG4
FBL
GPR107
S100A13
CHTOP
GNL2
ZNF33A
BRCA1
EIF3D
TTC5
PDF
RTF1
POLD1
APOM
BAG6
PPIL1
TK1
AFMID
CUL4A
SF3A1
CCDC157
SLC38A7
RASAL2
RIT1
IBA57
COMMD9
VPS45
GPN1
CCDC121
VPS72
COG2
WDR5B
PTCD2
MRPS27
EIF2AK1
PYGO2
LOC101928120
ZNF721
PIGG
DDX19B
NUDT9
MUL1
CEP126
DYNLL1
PLK4
TIGD4
ARFIP1
HNRNPH2
GLA
DNAH14
MVD
SPATA2
DPY19L4
LTV1
ZNF473
VRK3
PTRHD1
CENPO
TTI1
RPRD1B
RBM7
C11orf71
MTHFR
CLCN6
DBF4B
EXOC1
SMIM5
SPATA33
ASH1L
ZCCHC14
PPIL3
NIF3L1
NOLC1
OGDH
GTF2H3
EIF2B1
DUS2
DDX28
EXOSC3
GINS1
USP36
ABCA3
CFAP206
SPAG1
KLHL20
GCDH
EIF2B3
MRPS18C
HELQ
POLD3
CYB5A
THAP5
DNAJB9
NASP
ZZEF1
CYB5D2
ASB8
PSMB4
LAP3
NCOA7
STAT1
TIPRL
SRP54
NOM1
PIGW
MYO19
VPS8
CEP43
FUBP3
LMAN1
NAGK
RECQL
GOLT1B
URB2
TAF5L
SMC4
IFT80
RAB5B
SNAP47
JMJD4
HJURP
POLA2
CKLF-CMTM1
CKLF
EIF4A1
MCF2L
ZNF701
MED25
CFAP54
BUB1B
DHX33
TXNL4A
SPTY2D1
ADAR
IQCG
RBFA
SLC25A44
IGSF9
LMLN
ZBBX
TMEM147
RAB23
LAMA3
LTN1
AAAS
STOML2
COA3
CNTD1
TIPIN
KLC2
MXD3
ARIH1
RHNO1
FOXM1
FANCM
SLC14A1
MAGEA2B
MAGEA2
ZCWPW1
MEPCE
CENPF
TTLL9
CNPY2
LRRC57
HAUS2
ZNF507
IPO9
NF2
KLF5
PPAN-P2RY11
PPAN
ZNF669
COX19
TONSL
METTL25
CCDC59
CDC73
INO80B
NOC4L
DDX51
MAD2L1
KMT2D
SETD4
PPT2
CCZ1B
CENPA
NDFIP2
GRHL3
ZBTB7C
EHD3
CAPN14
NUP214
EIF2D
NEIL3
RBL1
NDUFB3
FAM126B
CDC6
SAXO2
EFL1
CHCHD3
PARPBP
NUP37
XPO5
POLH
MRI1
RSRC1
MEA1
IFT57
HYKK
CIART
ARMCX5-GPRASP2
ARMCX5
BOLA1
LAGE3
CBWD5
CBWD3
NDUFAF5
ESF1
CBWD6
TMEM41A
C2orf42
L3HYPDH
JKAMP
CWF19L1
SNRPD2
QPCTL
RANGAP1
TEPSIN
NDUFAF8
E2F2
ZNF319
USB1
EML5
POLR3H
CALR
MIA3
VPS26C
BRAP
ACAD10
DPH5
EDC4
SLC35C2
MRE11
ANKRD49
PIMREG
VPS53
TMEM231
BLOC1S2
POLR2C
FBXO25
BLMH
ACAA2
USP21
EEF1AKNMT
KCTD9
CDCA2
CDT1
ECSIT
PELP1
AKR1A1
VPS37A
CNOT7
ZNF133
POLL
DPCD
NDUFAF2
ERCC8
SLC30A5
WDR90
SHPK
CTNS
STRIP1
ZNF223
GTF3C3
SMIM12
USP32
PLK1
TRIM46
KRTCAP2
TCTN2
MFSD5
TMEM183A
MAD1L1
WRN
WEE1
PURG
EXOSC10
VTA1
NMBR
RRM2
ATAD2
DMAP1
BBS5
VIRMA
ABCB10
TOMM5
NEU1
POLE4
DDX11
SPC25
MRPL42
ADCK1
CSNK1G1
KCTD7
CHM
BCL2L13
HSP90AA1
PIP4K2C
SPG11
NTMT1
WDR20
UGGT2
C18orf25
NUP93
TTLL4
SNRPE
IMP4
CCDC115
RBM8A
SETDB1
DEPDC1
CHEK1
CDC37
PCID2
DNMT1
FAM174A
ADPRHL1
ZPR1
SLC25A14
KIAA1586
MRPL30
MITD1
DUS3L
AP5Z1
ATP6V1C1
MALSU1
C22orf39
CCT5
ATPSCKMT
PDE4A
SMARCD2
HSPBAP1
SPRTN
EXOC8
KMT5A
VPS18
CELF6
DUS1L
RBM34
SLC49A4
RPLP1
USP20
C9orf78
RMDN3
FBN1
MED1
SIGLEC15
TAS2R8