ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1053929 | iPS cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX16386913: 293

◢ SRX3010110: A549

◢ SRX3010111: A549

◢ SRX24188777: BJ

◢ SRX24188786: BJ

◢ SRX20550182: BT67

◢ SRX20550183: BT67

◢ SRX20550184: BT67

◢ SRX20599715: Caco-2

◢ SRX20599717: Caco-2

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX10616096: GM12878

◢ SRX10616097: GM12878

◢ SRX11374678: GM12878

◢ SRX11374679: GM12878

◢ SRX3322296: GM12878

◢ SRX3322297: GM12878

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX10478224: Hep G2

◢ SRX10478225: Hep G2

◢ SRX2423815: Hep G2

◢ SRX2423816: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX2023732: iPSC derived cardiac cells

◢ SRX2023764: iPSC derived cardiac cells

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◣ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX2423402: K-562

◢ SRX2423403: K-562

◢ SRX5457481: K-562

◢ SRX5457482: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX8064823: Lymphoblastoid cell line

◢ SRX8064824: Lymphoblastoid cell line

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX11399800: NCI-H1963

◢ SRX11399801: NCI-H1963

◢ SRX11399802: NCI-H1963

◢ SRX9779520: NCI-H1963

◢ SRX4732741: Pre-B cells

◢ SRX7981741: Prostate cancer

◢ SRX7981742: Prostate cancer

◢ SRX7981743: Prostate cancer

◢ SRX7981744: Prostate cancer

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX9562892: RH-4

◢ SRX9562897: RH-4

◢ SRX19212560: SK-N-MC

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

UBC
CAMTA1
ZNF555
NPAS4
ZEB1
GSN
RAB14
TDRD7
ZNF276
VPS9D1
PKDCC
POLR3H
ACTG1
ZNF77
VIM
CALR
ASMTL
RNF187
WDR74
HTR5A
MTRNR2L2
XKR7
IQSEC3
MTRNR2L8
CPLX2
GBA
SNX16
NBPF1
NUF2
CYB5R4
UTP20
POLR2J3
ZNF335
PAXBP1
NOTCH2NLC
RRP15
NOTCH2NLB
NOTCH2NLA
NDUFS7
NME1
WASHC2C
CRNKL1
CFAP61
SLC35A4
APBB3
RBM48
PEX1
FANCD2
UTP25
TIPARP
ARCN1
KCTD18
KXD1
TRMT1
ZMPSTE24
PDE4DIP
CCDC107
NUP214
NAGPA
NEURL2
CTSA
AHCY
HEXA
PSMD9
HPD
SUMF1
LAMP1
YJU2
PPT1
TMEM248
CCDC200
VPS33A
WASHC2A
COPS7B
STX16
HPCA
RBM19
TRIP4
RPS19
IBA57
QTRT1
TMEM242
SCFD2
CRBN
EXO1
SPNS1
SSBP1
DHDDS
WASHC5
NSMCE2
TTLL4
P4HA1
CELSR3
EIF2D
METAP1D
BARHL1
TRMO
UBFD1
EARS2
RAB37
GSTA4
ITGB3BP
EFCAB7
ZCCHC7
SNAP25
SLC39A3
TTC26
IQGAP3
FBRS
PWWP2A
USP35
KCTD21
RBBP5
MARCHF4
TDRKH
METTL1
EEF1AKMT3
DCUN1D2
VPS50
HEPACAM2
CCNG2
IDH3B
RABL2B
SOD2
NEK2
OSCAR
NDUFA3
SMG8
SPATA2
ZCWPW1
MEPCE
IPO4
H4C8
CHGB
EPHA10
TPH2
COMMD2
NOL8
CENPP
TIGAR
GATB
NFE2L2
NBPF15
MTFR2
LARP1
WDR4
TIMM17A
FAM72C
FAM227B
DTWD1
RPS29
CDK7
SARS1
HAGH
FAHD1
BNIP3L
BIRC5
KAT5
SLX1B
SLX1A
BOLA2
HIBADH
SVOP
BOLA2B
SUPT7L
SLC4A1AP
SPOP
SF3A3
MTF2
HMGB1
CASC3
WTAP
TRUB2
COQ4
SEC31A
RFX1
COMMD4
POLR3F
DZANK1
CPPED1
N6AMT1
EIF1AD
BANF1
KLHL18
KIF9
PI16
CBWD5
NCAPH
PSME3
SLC12A9
RTTN
WDR36
SLC45A4
LUC7L2
KNL1
NUP107
PAFAH2
CBWD3
THAP9
TXLNA
CBLL1
GPATCH3
MRM3
GLOD4
MIS18A
METTL25
CCDC59
NDUFS3
KBTBD4
CCDC88A
MRPL27
EME1
H4C14
KDM3A
CDK5RAP1
GTF3C3
EBAG9
BLOC1S1
FNBP1
SMYD5
POLG
RTF2
L1CAM
MFSD1
PRRC2B
DRG2
INTS12
GSTCD
KLHL22
DHX40
BCAS3
ATR
ASF1A
NSUN4
VTA1
NMBR
DNAJC5
BOLA2-SMG1P6
YTHDF2
YARS1
STAM2
COMMD9
NUDT15
NEIL3
MAPK8IP2
FAM72D
CRKL
FAM72A
PEX3
ADAT2
ZNF684
PLEKHM3
UTP11
RBM28
CSTF1
AURKA
TRAPPC6A
BLOC1S3
SLC25A51
USPL1
C8orf37
MTRNR2L9
TSFM
TBRG4
NRL
DCAF11
RRP12
TMEM199
POLDIP2
PDE4A
POLR3B
OGDH
DDX18
KLHL20
S100PBP
UBE2L3
MRPL40
HIRA
C16orf71
ANKS3
NOP16
HIGD2A
MRPL44
MTIF2
HUS1
CCDC146
ATL3
STAT3
NOS3
KIAA1586
E2F6
FMC1-LUC7L2
C12orf66
STX18
LRRC29
TOMM22
HNRNPD
NUP35
ZFPL1
CDCA5
RFC1
FBXO5
CKAP2L
CWC25
ATP6V0D1
CMSS1
NAGK
PGAM5
TRIAP1
KIAA0895
DPY19L4
FBXL13
ARMC10
QTRT2
CCDC191
USP54
TOP3B
CCNA2
ABCB8
GTF2H3
EIF2B1
POLR3E
MED23
INTS7
DTL
CCDC86
SNRPE
ACVR1
VPS37D
GOLGA7
DZIP3
CIP2A
SUPV3L1
SASS6
TTC31
LRRC59
TRMT6
MCM8
MRPL45
TTC27
CENPS-CORT
CENPS
KIF20A
BRD8
COX16
CCDC106
RAB11A
SGO1
NDUFAF5
ESF1
TFB2M
CNST
PGBD5
GRWD1
ADPRS
CBWD6
PMVK
PUS10
PEX13
LTV1
EBNA1BP2
CFAP57
RGL1
PFDN4
EDC3
MTBP
MRPL13
PIKFYVE
UTP3
ZC3HC1
GDAP1
TBC1D19
ATG14
SLC24A1
CACTIN
GTF3C4
DDX31
SSNA1
ANAPC2
PHOSPHO2-KLHL23
PHOSPHO2
CCDC173
NOL6
HDAC2
OPA1
ZC3H15
DNAJC25-GNG10
DNAJC25
URB1
P2RX6
CFAP298-TCP10L
CFAP298
SACM1L
RAD51
ARPC5
PCIF1
SAP30BP
RECQL5
TFB1M
GPATCH4
NAT10
PIGU
GTPBP10
GTF2H4
CFAP54
C5orf51
FAM228B
NUCKS1
TMEM186
PMM2
CDC73
RBM42
PRMT2
RPTOR
CCNL1
H4C15
PPIL2
AIMP2
NMNAT1
LZIC
NLE1
TOMM40
C8orf33
UBE2O
AANAT
RABGAP1L
HEATR1
TSR3
GNPTG
EXOSC5
BCKDHA
NOTCH2
DCLRE1B
AP4B1
TMEM41A
TACO1
THAP7
FMC1
DHX37
RABEP2
PPWD1
CENPK
TATDN3
NSL1
NUP54
TFPT
PRPF31
RGPD2
RGPD1
TTC21B
FAM133B
SIRT4
AP1M1
IREB2
CNOT4
MRPS15
WDR46
PFDN6
COASY
RBKS
BABAM2
ARFGEF2
NOL7
POLR3D
FAM98B
SECISBP2
MRPS23
NCOA7
UBE3B
KCTD10
YIF1A
TSN
TEFM
KIF18B
ATP5F1E
ING3
KLHL32
TIGD1
EIF4E2
ZNF830
CCT6B
MTERF4
KIF15
KIAA1143
GOLM2
SMIM12
RRM2
CAP1
ZNF558
UFD1
CDC45
CENPF
RUVBL1
PPP6R1
EIF3F
FXN
APOM
GATAD2A
UBE2Q1
PAK1IP1
FAM72B
C6orf52
CCDC142
MRPS33
TRMT61B
PUM3
CLK3
NR6A1
SRSF11
CDC25B
PMS2
ACVR2A
PNO1
GCDH
SKA1
RPS27L
SELENOH
SFSWAP
GFM1
MMAA
GON4L
USP2
RLF
STAT1
INTS5
BNIP1
SLC25A26
CEP135
MIA3
TAF13
TAMM41
POM121
MRPL48
RPAP3
DCT
TMEM222
MRPL30
MITD1
C16orf87
DSTYK
ZGRF1
LARP7
DSCC1
EIF2B3
BCAR3
VPS26C
RPS7
TBP
PSMB1
PRCP
PARL
H4C3
PTPN4
CFAP299
ANKRD12
CYRIB
NOL10
NTAQ1
SF3B6
LRP2BP
ANKRD37
MRPL1
SLC33A1
GLRA1
MCM7
AP4M1
PRMT5
PFKM
WDPCP
MDH1
FAM98A
RIMBP3B
TFIP11
ZNF165
AAR2
ABCB6
DDIAS
PSMD3
PGK1
ARHGDIA
INO80B
PRAME
ATAD2
ESCO2
DDX41
KLHL12
POU2F1
WDR11
VPS45
BLCAP
RPL27
POC5
H6PD
TOP3A
SMCR8
DNAJC11
TMED1
PARP2
RRS1
SUGCT
MPLKIP
TSGA10
TMEM181
SNX17
G6PC3
EIF2B4
CCT2
OXNAD1
DPH3
SYNJ1
RBL1
ESYT2
C2orf42
CZIB
KIF2C
SWSAP1
ZBTB45
KDM1A
DUS2
DDX28
MRPS18C
HELQ
AGBL3
RAD54L
INO80C
GRN
MRPS35
ACOX3
SLC35B1
C6orf89
RIMBP3C
SKA3
MRPL57
YDJC
RHEBL1
BOD1
WDR62
THAP8
SMN2
SMN1
DPP9
RTN4
PIGBOS1
PIGB
XRN2
PPIP5K2
NADK2
DUS3L
VPS29
RAD9B
PIH1D2
NKAPD1
PCNA
DCAF10
SCNM1
LYSMD1
SGO2
LRRC37A3
IMP4
CCDC115
TARS2
STX6
SKIV2L
NELFE
RPA2
FBXO48
APLF
MRPL21
IGHMBP2
PPIH
AP5Z1
RIOK1
CAND1
CAGE1
GFM2
C16orf46
DDX21
COPS4
HCFC2
GLT8D2
RC3H2
YBEY
KYAT1
TRIT1
MARCHF8
IPO11
PALB2
NOC3L
RNASEH1
COMMD1
ZSCAN22
LSG1
PBK
MOB4
SMG7
FAM207A
GTF3C5
UNG
DPF1
ZNF473
VRK3
CALM2
PLS1
MTR
IL1R1
TXNDC9
DYNC2I1
RAD54L2
SLC35A5
ATG3
POLR1B
HBP1
TIMM9
KIAA0586
FBXW8
RNF166
CTU2
BAG6
EPRS1
SNRPC
GALK2
CLSPN
SEC13
SEC11A
LAMTOR5
MRPL39
EEF1AKNMT
CLUAP1
TAF6L
PPM1B
EIF5B
FAM117B
S100A13
NUP155
DDIT4
ATG5
KDM2A
DNAJB4
TSEN54
PLK3
CASKIN2
POMZP3
MRTO4
EMC1
AIP
MRPL3
RBM8A
TRAPPC9
SNRPB2
ELF1
TTI2
WFDC3
DNTTIP1
ZCCHC14
LZTR1
CFAP20
ENDOV
RBM45
TMEM101
SLC44A1
ZNF721
PIGG
SMIM30
SPHK2
RPP40
DCTN5
WBP4
DMAP1
LTN1
ACTR6
REXO4
SHC1
AARS2
RAPGEF6
USP16
SH2B1
BBS5
NBN
FANCI
DDX19A
U2SURP
FAF1
TOR1A
VIRMA
ERMAP
TMEM9
KCTD9
CDCA2
MAN2C1
PTRHD1
CENPO
HSPA9
IGF2BP3
COPS8
USP30
TIMM10
CCNB1
NDUFAF4
MAIP1
ANKRD36C
IPO13
HPS4
DIABLO
TCP11L2
MIS18BP1
FAM156A
AMZ2
PRPSAP1
GFI1B
TMEM230
IFT46
DPH1
CYB561D1
TBC1D30
JMJD1C
SYT11
SMARCD2
CKS1B
ACBD6
GLT8D1
HAX1
ZNF408
ARHGAP1
FOXJ3
DDX59
ABCF1
SLF2
NUDCD3
ZAR1L
DCP1A
BRCA2
TMEM259
SEPTIN9
DNTTIP2
DMAC2
NDUFB3
FAM126B
ZDHHC12
DNAJB12
XRCC2
THADA
MRPS28
SRRD
KPNB1
CDT1
THEM6
NUP42
C12orf73
RBIS
BSDC1
MTDH
MPHOSPH10
MCEE
NPPB
OAZ3
CAST
ADPGK
ILF2
DIMT1
TTK
RPIA
RABGEF1
RIOK3
POLR2J
DDX1
B3GALNT2
RBSN
DNPEP
ANLN
CERCAM
TTC3
RING1
PCM1
TBL3
PC
ZCCHC4
LRRC49
UMAD1
TVP23B
CTCF
MOK
PPIL1
RAD18
PPP1R11
APRT
VARS1
GNS
AURKB
THG1L
ATP6V1C1
SLC25A32
DCAF13
PNPT1
VPS11
PNPLA8
ASNS
VPS35
PHB2
TUT1
MVK
XPC
LSM3
TTF2
FAM185A
SHQ1
AJUBA
DPP3
FAM135A
CCAR2
PSEN2
AKAP1
EIF3H
TIMM21
IRF9
FBXO4
FBXO15
FAM86B1
PHF5A
HEXIM1
ACO2
ZNF76
C2CD5
PCNP
RAD51AP1
DDX49
COPE
C12orf4
DARS2
CENPL
ANG
TIMM44
TMEM237
ASAH1
STXBP3
ZNF778
RAD9A
CHD1L
THAP10
TM9SF4
COMMD6
GTF2H2
CNTRL
ASXL1
TNPO3
PRKCSH
CCDC151
MCOLN1
SETDB1
INKA2
ABT1
FRA10AC1
ZSCAN25
MCCC1
PPAN-P2RY11
PPAN
MRPL38
D2HGDH
BLM
SERP1
EIF2A
BRIX1
DCTPP1
CGGBP1
MCM3AP
ZBTB40
MRPL4
ACYP2
FAM149B1
ECD
PPIL3
NIF3L1
LYRM4
FARS2
ZNHIT6
SYF2
CNPY3
CDC6
NGLY1
NDUFC2-KCTD14
NDUFC2
GET3
ANAPC5
DST
ATP5MC2
CDK5RAP3
POLD3
ZNF383
ALG10
FBXW9
SEC22C
MYNN
CCNC
ALG1
PIP5K1A
IARS1
SECISBP2L
CKMT1B
EXOSC3
RECQL
PPP2R5A