ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX116424 | K-562
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX16386913: 293

◢ SRX3010110: A549

◢ SRX3010111: A549

◢ SRX24188777: BJ

◢ SRX24188786: BJ

◢ SRX20550182: BT67

◢ SRX20550183: BT67

◢ SRX20550184: BT67

◢ SRX20599715: Caco-2

◢ SRX20599717: Caco-2

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX10616096: GM12878

◢ SRX10616097: GM12878

◢ SRX11374678: GM12878

◢ SRX11374679: GM12878

◢ SRX3322296: GM12878

◢ SRX3322297: GM12878

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX10478224: Hep G2

◢ SRX10478225: Hep G2

◢ SRX2423815: Hep G2

◢ SRX2423816: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX2023732: iPSC derived cardiac cells

◢ SRX2023764: iPSC derived cardiac cells

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◣ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX2423402: K-562

◢ SRX2423403: K-562

◢ SRX5457481: K-562

◢ SRX5457482: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX8064823: Lymphoblastoid cell line

◢ SRX8064824: Lymphoblastoid cell line

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX11399800: NCI-H1963

◢ SRX11399801: NCI-H1963

◢ SRX11399802: NCI-H1963

◢ SRX9779520: NCI-H1963

◢ SRX4732741: Pre-B cells

◢ SRX7981741: Prostate cancer

◢ SRX7981742: Prostate cancer

◢ SRX7981743: Prostate cancer

◢ SRX7981744: Prostate cancer

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX9562892: RH-4

◢ SRX9562897: RH-4

◢ SRX19212560: SK-N-MC

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

NPAS4
MTRNR2L2
HTR5A
MTRNR2L8
XKR7
IQSEC3
HPCA
NUP214
TUBA1A
RBM48
PEX1
MICAL3
ZNF335
MTRNR2L9
TDRD7
CPLX2
RFX1
EIF2D
SFSWAP
L1CAM
MTRNR2L10
GON4L
SYT11
SUMF1
WDR74
EPHA10
PDE4A
RGPD2
RGPD1
NACAD
RIMBP3B
RIMBP3C
RIMBP3
TOP3B
CYB5R4
SNX16
ZCCHC7
CHGB
MACIR
TIGAR
UBE2L3
CACNG3
OSCAR
NDUFA3
MAPK8IP2
CKMT1A
P2RX6
CKMT1B
NBPF1
MFSD4B
PIN1
CELSR3
NPPB
UTP20
MANEAL
CLVS1
NAGPA
GPR158
UFD1
CDC45
NEU1
PRAME
SCG3
PSMD9
HPD
BARHL1
SNAP25
GET3
SHFL
NUCKS1
TJP3
MTRNR2L6
RTL10
GNB1L
TTC9B
ADCYAP1
RBM19
TMEM181
FIBCD1
ANK1
PAQR4
PICK1
FBXO5
USP35
KCTD21
UQCR11
ANKHD1-EIF4EBP3
ANKHD1
SCRT1
TPBGL
SVOP
CIZ1
DHX40
TOMM22
MEGF9
TRAF1
VPS37D
GPR78
SPATA2
ATL3
ADPRS
MAPK1
GNB4
PPFIA3
C19orf73
RAB37
PGBD5
ZCWPW1
MEPCE
VARS1
UBE2O
AANAT
TTC38
NEK6
TRMT1
WASHC2C
KLHL18
KIF9
CRKL
UTP11
FAM72C
FAM72A
GFOD1
FAM72D
MRPL40
HIRA
KIF18B
NBPF3
TRIP13
BRD9
FEM1A
ACBD6
DYSF
TSR3
GNPTG
GBA
PDE4C
CHRM4
METAP1D
RRM2
CYRIB
FAM72B
TSPAN13
ESCO2
SST
FNBP1
GTF2H3
EIF2B1
CRBN
DNAJC11
IER5L
NBPF15
C6orf136
IDH3B
UBE3B
KCTD10
TSEN2
ADAMTS14
RFC1
ODF2
ARHGAP28
YPEL1
RRP15
C12orf66
METTL2B
WASHC2A
DHX37
TMEM121B
DPF1
SGSM1
ESYT2
VPS37C
RASGRP2
QTRT1
RABIF
E2F6
SLC25A24
CREG1
INPP5B
IL1RL1
NUP35
HNRNPD
RPA2
C1orf109
CDCA8
TMEM199
POLDIP2
KCNK12
ANKRD36C
SYNJ2
TCF19
CCHCR1
LCMT2
ADAL
WSCD2
BOD1
CDC7
SOGA1
BRAF
NRCAM
VPS50
HEPACAM2
CBX8
S100A8
C15orf39
ZC3H15
COASY
DNAJC6
CCDC92B
TRAPPC2L
GALNS
SLC66A3
SMYD5
NAT10
EPC2
TIMM10
ITPR3
NOP16
HIGD2A
GPATCH4
PPIL2
ACVR2A
KTI12
TAS1R1
NOL9
LRRFIP2
EML2
PAFAH2
GPATCH3
RING1
PUS7
SYMPK
MRPS26
FOXA3
CSRNP1
ALX4
CRNKL1
CFAP61
PIK3CD
ZBTB32
PTGFRN
GATA1
ITGAV
RAB36
PDLIM7
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
C8orf33
CHST12
AP3B2
DNA2
ACE
NOL6
RABEP2
ST6GAL1
TSTD2
NCBP1
SPNS1
YDJC
BUB1B
AMER3
IBA57
CLK3
NTAN1
CBLL1
TRAIP
LRP11
GGACT
COLGALT2
PGPEP1
SCGN
LOC388282
LTV1
XPC
LSM3
TADA1
SLC27A4
GATB
FUT11
DGAT2
HEXA
GRM1
KISS1R
DRG2
DRD2
CD83
LYSMD2
GRPEL2
SNAP29
PI4KA
MARCHF11
RPP25
AEN
CMIP
PSME3
SLC12A9
VTA1
NMBR
THAP7
ASNS
PNPLA6
DGCR8
ZFYVE26
OGDHL
TMEM191B
KLHL21
TARBP1
OXNAD1
DPH3
FAM78A
H4C11
CRH
CLN6
AIMP2
PMS2
ZSCAN30
IQGAP2
PPIA
PRELID2
NME1
HPS4
XRCC2
SRRD
FDX2
AKT2
SRXN1
BCAT1
CNNM3
AIF1L
ALG1
TRMT2A
RANBP1
STOX1
CDC25B
OAZ3
ZFYVE1
THOC3
IMMP2L
EXOSC2
HSPA1B
MAPK11
CBFA2T2
TAP1
PSMB9
GADD45B
GRIK1
CNOT4
ZNF830
CCT6B
SETD1A
SFT2D3
NFE2L2
ATP5PO
NSMAF
DUSP1
PWWP2A
FMC1-LUC7L2
FMC1
KDM4A
DGCR6L
PPM1G
SMIM11B
SMIM11A
CARD11
SLC39A3
PDE1C
VAC14
KAT6B
PKD2L2
CCDC69
OR2L13
FNDC10
ZC3HC1
SRSF7
PRRT3
ANKRD36B
ZNF596
PYCR3
CERS6
ARRDC2
ASCL2
USP54
EPS15
CYP51A1
SLC38A10
STX7
RCCD1
OGFOD1
COTL1
CXCL3
NEURL2
CTSA
MIS18A
GTF3C4
DDX31
AGBL3
PCNA
ATP6V0E2
RECQL4
LRRC14
PERP
EBNA1BP2
CFAP57
DCLRE1B
AP4B1
KIF2C
UBIAD1
TRAP1
GRWD1
RBSN
SORBS1
GTPBP3
ANO8
SELPLG
CACTIN
ZDHHC12
POLQ
CDC42BPG
HDAC11
TMEM70
LEF1
ANKRD63
SLX1B
SLX1A
BOLA2
BOLA2B
BOLA2-SMG1P6
SKA3
MRPL57
RAB33B
NOM1
DOLPP1
MRPL2
KLC4
VHL
HRK
TMEM242
KLHL22
TSEN54
CASKIN2
MRTO4
EMC1
MYPOP
PIP4P2
MISP3
UBE2H
N6AMT1
KIAA0895
PIGBOS1
PIGB
ANLN
NUDT2
KIF24
POLR3G
MBLAC2
AQP11
SDF2L1
TMEM191C
KLHL36
SUFU
TMEM248
DHDDS
TRUB2
COQ4
DNTTIP2
CDK11B
CDK11A
SRGAP1
PHF20
ADARB1
TBX1
CENPS-CORT
CENPS
URB1
OIP5
NUSAP1
HNRNPLL
H2BU1
H2AW
TCIRG1
LRRC8B
OAF
VPS33A
BIRC5
CPPED1
MFSD1
LZTR1
HLTF
NSUN5
NOB1
GLRA1
TTC26
CCNA2
POLR1B
EIF3H
DGUOK
ZNF75A
TIGD7
PHC2
PHACTR2
CNTRL
C5
GALNT2
GSTK1
DGCR2
LRRC26
OXTR
YIF1A
SAR1B
CHCHD3
TNFRSF21
TASOR2
XXYLT1
MYLIP
AGK
AKAIN1
MTFR2
CCT2
JMJD1C
VSNL1
PLK1
CENPE
FCHO1
DLK2
C3orf80
MYO18A
HACE1
ZNF280D
TENT5C
FRMD6
TRMT61A
COX14
OTULIN
NAE1
EXOSC6
ATE1
PAXBP1
SYNJ1
XYLB
RNF141
ZNF74
COMMD1
FBXO4
CCT4
MMP24
RPUSD2
ZKSCAN4
SCCPDH
HACD3
GCDH
FBXO28
TNFRSF8
SARS1
C5orf51
CYB561D1
STIL
USP48
MTHFD1
BRI3BP
EMILIN2
UTP25
RNF187
MARCHF4
CFAP298-TCP10L
CFAP298
THEM6
CRELD1
PPP1R7
PASK
B3GNTL1
CDKN1A
RARG
COMT
PDE4DIP
ANKRD36
CBFB
ADAM19
TOP3A
SMCR8
ZNF398
GALNT11
TRIM67
FAM181B
PTPRB
TTF2
NSFL1C
ANXA7
RNASEH2C
ECI2
CFAP299
SNX8
CREB3L2
DGAT1
VPS35
BRAP
ACAD10
TBC1D22A
NUDT3
PLD1
ID3
PINX1
CDKAL1
CENPN
CPNE9
ITPR2
SRSF10
PLLP
SSBP1
BIRC6
GGCT
BLOC1S1
POLR2J
ITSN1
CRYZL1
GPATCH1
RAB39A
H1-10
DMTN
SPOCD1
RTTN
OXR1
ZMPSTE24
SOD2
ACAT2
NOL7
C22orf39
C16orf71
ANKS3
GAA
MCUB
SAMD13
RAD51
METTL1
EEF1AKMT3
STX11
STK40
AKAP1
GSN
RAB14
CAMTA1
ZNF555
NUF2
POLR2J3
NDUFS7
SLC35A4
APBB3
FANCD2
TIPARP
ZNF77
ARCN1
KCTD18
KXD1
CCDC107
AHCY
LAMP1
YJU2
PPT1
CCDC200
COPS7B
STX16
TRIP4
RPS19
SCFD2
POLR3H
EXO1
WASHC5
NSMCE2
TTLL4
P4HA1
ZEB1
TRMO
UBFD1
EARS2
GSTA4
CALR
ITGB3BP
EFCAB7
IQGAP3
FBRS
RBBP5
TDRKH
DCUN1D2
CCNG2
RABL2B
NEK2
SMG8
IPO4
H4C8
TPH2
COMMD2
NOL8
CENPP
LARP1
WDR4
TIMM17A
FAM227B
DTWD1
RPS29
CDK7
HAGH
FAHD1
BNIP3L
KAT5
HIBADH
SUPT7L
SLC4A1AP
SPOP
SF3A3
MTF2
HMGB1
CASC3
WTAP
SEC31A
COMMD4
POLR3F
DZANK1
EIF1AD
BANF1
PI16
CBWD5
NCAPH
WDR36
SLC45A4
LUC7L2
KNL1
NUP107
CBWD3
THAP9
TXLNA
MRM3
GLOD4
METTL25
CCDC59
NDUFS3
KBTBD4
CCDC88A
MRPL27
EME1
H4C14
KDM3A
CDK5RAP1
GTF3C3
EBAG9
POLG
RTF2
PRRC2B
INTS12
GSTCD
BCAS3
ATR
ASF1A
NSUN4
DNAJC5
YTHDF2
YARS1
STAM2
COMMD9
NUDT15
NEIL3
PEX3
ADAT2
ZNF684
PLEKHM3
RBM28
CSTF1
AURKA
TRAPPC6A
BLOC1S3
SLC25A51
USPL1
C8orf37
TSFM
TBRG4
NRL
DCAF11
RRP12
POLR3B
OGDH
DDX18
KLHL20
S100PBP
MRPL44
MTIF2
HUS1
CCDC146
STAT3
NOS3
KIAA1586
STX18
LRRC29
ZFPL1
CDCA5
CKAP2L
CWC25
ATP6V0D1
CMSS1
NAGK
PGAM5
TRIAP1
DPY19L4
FBXL13
ARMC10
QTRT2
CCDC191
VIM
ABCB8
POLR3E
MED23
INTS7
DTL
CCDC86
SNRPE
ACVR1
GOLGA7
DZIP3
CIP2A
SUPV3L1
SASS6
TTC31
LRRC59
TRMT6
MCM8
MRPL45
TTC27
KIF20A
BRD8
COX16
CCDC106
RAB11A
SGO1
NDUFAF5
ESF1
TFB2M
CNST
CBWD6
PMVK
PUS10
PEX13
RGL1
PFDN4
EDC3
MTBP
MRPL13
PIKFYVE
UTP3
GDAP1
TBC1D19
ATG14
SLC24A1
SSNA1
ANAPC2
PHOSPHO2-KLHL23
PHOSPHO2
CCDC173
HDAC2
OPA1
DNAJC25-GNG10
DNAJC25
SACM1L
ARPC5
PCIF1
SAP30BP
RECQL5
TFB1M
PIGU
GTPBP10
GTF2H4
CFAP54
FAM228B
TMEM186
PMM2
CDC73
RBM42
PRMT2
RPTOR
CCNL1
H4C15
NMNAT1
LZIC
NLE1
TOMM40
RABGAP1L
HEATR1
EXOSC5
BCKDHA
NOTCH2
TMEM41A
TACO1
PPWD1
CENPK
TATDN3
NSL1
NUP54
TFPT
PRPF31
TTC21B
FAM133B
SIRT4
AP1M1
IREB2
MRPS15
WDR46
PFDN6
RBKS
BABAM2
ARFGEF2
POLR3D
FAM98B
SECISBP2
MRPS23
NCOA7
TSN
TEFM
ATP5F1E
ING3
KLHL32
TIGD1
EIF4E2
MTERF4
KIF15
KIAA1143
GOLM2
SMIM12
CAP1
ZNF558
CENPF
RUVBL1
PPP6R1
EIF3F
FXN
APOM
GATAD2A
UBE2Q1
PAK1IP1
C6orf52
CCDC142
MRPS33
TRMT61B
PUM3
NR6A1
SRSF11
PNO1
SKA1
RPS27L
SELENOH
GFM1
MMAA
USP2
RLF
STAT1
INTS5
BNIP1
SLC25A26
CEP135
MIA3
TAF13
TAMM41
POM121
MRPL48
RPAP3
DCT
TMEM222
MRPL30
MITD1
C16orf87
DSTYK
ZGRF1
LARP7
DSCC1
EIF2B3
BCAR3
VPS26C
RPS7
TBP
PSMB1
PRCP
PARL
H4C3
PTPN4
ANKRD12
NOL10
NTAQ1
SF3B6
LRP2BP
ANKRD37
MRPL1
SLC33A1
MCM7
AP4M1
PRMT5
PFKM
WDPCP
MDH1
FAM98A
TFIP11
ZNF165
AAR2
ABCB6
DDIAS