ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2423403 | K-562
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX16386913: 293

◢ SRX3010110: A549

◢ SRX3010111: A549

◢ SRX24188777: BJ

◢ SRX24188786: BJ

◢ SRX20550182: BT67

◢ SRX20550183: BT67

◢ SRX20550184: BT67

◢ SRX20599715: Caco-2

◢ SRX20599717: Caco-2

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX10616096: GM12878

◢ SRX10616097: GM12878

◢ SRX11374678: GM12878

◢ SRX11374679: GM12878

◢ SRX3322296: GM12878

◢ SRX3322297: GM12878

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX10478224: Hep G2

◢ SRX10478225: Hep G2

◢ SRX2423815: Hep G2

◢ SRX2423816: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX2023732: iPSC derived cardiac cells

◢ SRX2023764: iPSC derived cardiac cells

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX2423402: K-562

◣ SRX2423403: K-562

◢ SRX5457481: K-562

◢ SRX5457482: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX8064823: Lymphoblastoid cell line

◢ SRX8064824: Lymphoblastoid cell line

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX11399800: NCI-H1963

◢ SRX11399801: NCI-H1963

◢ SRX11399802: NCI-H1963

◢ SRX9779520: NCI-H1963

◢ SRX4732741: Pre-B cells

◢ SRX7981741: Prostate cancer

◢ SRX7981742: Prostate cancer

◢ SRX7981743: Prostate cancer

◢ SRX7981744: Prostate cancer

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX9562892: RH-4

◢ SRX9562897: RH-4

◢ SRX19212560: SK-N-MC

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

ARCN1
PI16
SARS1
KLHL22
OSCAR
NDUFA3
TDRKH
PRAME
IBA57
RFX1
NOS3
UTP20
GBA
PPIL2
RBM19
PSME3
ZNF335
METTL1
EEF1AKMT3
CRKL
NPAS4
NUP214
COASY
TIGAR
FNBP1
TRUB2
COQ4
IGF2BP3
NME1
NBPF1
ITGB3BP
EFCAB7
PSMD9
HPD
RRP15
USP35
KCTD21
RABEP2
P2RX6
GP1BB
UBE2L3
CDK7
BNIP3L
HTR5A
KXD1
VPS37D
NUCKS1
ZCCHC14
NBPF15
POLR2J3
SLC12A9
SORBS1
DAXX
IDI1
MARCHF2
WASHC2C
METAP1D
TKT
CMIP
AHCY
DRG2
THAP7
LZTR1
CASC3
CACTIN
FKBP8
TBP
PSMB1
SPATA2
SEMA4B
EHBP1L1
SLC35A4
APBB3
TRMT1
YDJC
ERMAP
CYRIB
METTL14
SSBP1
LOC100287896
LIPT2
DPH2
CKMT1A
SMN2
SMN1
GSN
RAB14
UTP25
WDR46
PFDN6
MKNK2
PWWP2A
MRPS28
PTMS
AP1M1
TMEM248
CZIB
TNPO3
SGSM1
CCNG2
SNRPE
ARL17B
ARL17A
IL1R1
UBFD1
EARS2
SUPT7L
SLC4A1AP
TIMM17A
BCAS3
HPS4
SRRD
RPS19
POC5
GPATCH3
MRPL27
EME1
CHST12
TRMO
VTA1
NMBR
RBM48
PEX1
PAFAH2
RRP12
GTF2H4
IREB2
DDIT4
GDAP1
USP54
SUPV3L1
BRAP
ACAD10
FCHO1
CPPED1
AJUBA
ARHGEF1
KAT5
QTRT2
CCDC191
SDF2L1
CYB561D1
NACAD
UBE2O
AANAT
RPL23A
RAB34
GNL2
KLHL18
KIF9
TOMM40
SLC25A37
NTAN1
LDLRAP1
ZSWIM4
ATP6V0E2
HNRNPH1
NUFIP2
SNX8
YIF1A
ZCCHC24
FOXP4
TTC26
SWSAP1
TTC38
VILL
QTRT1
SLX1B
SLX1A
BOLA2
BOLA2B
SLC29A3
PAK4
CLPTM1
MIS18A
CCDC22
CALR
MRPS15
SMYD5
AKT2
ATAD2
PIN1
SYMPK
FOXA3
GRK6
CCSER2
SPACA6
CCT2
SEC22C
SS18L2
RPUSD4
FAM118B
PPP1R10
MRPS18B
MTF1
HCFC2
GLT8D2
USP2
PRPSAP1
DDX42
CCDC47
TTYH3
BLOC1S1
DYRK1B
GTPBP3
CDC42BPG
PAXBP1
CYB5R4
SCFD2
POLR3D
ZSCAN21
GATB
SPHK2
RPL18
CEP162
SLC39A6
ELP2
SLC38A10
ANKRD13C
PLK3
KDM3A
RBM28
ZNF408
ARHGAP1
CGB1
NR6A1
BLCAP
OTUD6B
RBM8A
BMS1
TPH2
GPATCH4
MRPL1
NDUFS3
KBTBD4
PDE4A
RPS27L
YJU2
ACVR2A
PXMP4
USP6NL
H6PD
PIH1D2
NKAPD1
ZDHHC12
AGO1
NOL6
DHODH
SPOCD1
CDC25B
RC3H2
DMAC2
PRRT3
STX2
AQP10
NUF2
UFD1
CDC45
SNRPC
CDIPT
PITHD1
WDR4
PTPN4
GPN3
FAM216A
SLC19A1
CRNKL1
CFAP61
TFB2M
CNST
SCG3
MTBP
MRPL13
CEP85L
PCIF1
PMVK
MVK
SIRT5
PDLIM7
C16orf46
GFI1B
CCNI
SNUPN
ASAP3
TOP3B
PPIH
DNAJB12
KRR1
TIMM23B
PARG
RAC1
IFI16
EDEM2
PKD2L2
PAQR4
THEM6
TRIM5
BAGE5
BAGE4
BAGE3
BAGE
CNOT4
HACL1
BTD
TMEM242
NEK2
NEU1
NR1H3
ACP2
ZNHIT6
MAP3K3
TMEM87A
GANC
SCN9A
TYROBP
NOL8
CENPP
DDX21
ZNF687
MAPK1
VPS13B
BRD2
URB1
LARS2
ZBTB21
SLC26A11
KCTD9
CDCA2
NDUFAB1
TCP11L2
IL1RL1
RHEBL1
AKR1A1
RPSA
LRP6
PGPEP1
FBXO21
IMP4
CCDC115
CLK3
ZSCAN25
FAM168A
ZNF107
RASSF4
C16orf71
ANKS3
CFAP299
INKA2
DDX20
TMEM191B
APOM
BAG6
NLRX1
XKR7
MRPL42
MYPOP
MRPS33
RPS8
CLN6
ZDHHC24
ACTN3
CD2BP2
DCLRE1C
DGAT2
ZBTB32
ZNF74
MFSD4B
TTC13
ARV1
MAN2A2
WDR83OS
WDR83
CCDC116
PITPNA
RRS1
MAP1LC3C
MTFR2
TFB1M
BNIP1
MCM7
AP4M1
PIK3R3
PHF19
DNAJC18
ZSCAN31
CYP51A1
MKNK1
CDK9
WASHC2A
GTPBP10
USP16
B3GALNT2
GTF2H5
HEATR5B
GPATCH11
FAM83A
NRROS
AIFM1
WFDC3
DNTTIP1
ENDOV
TMC6
NLE1
TIMM44
TTC39A
SPNS1
DHDDS
LUC7L2
FMC1-LUC7L2
INTS7
DTL
TSC1
CLCC1
HERC1
BRD7
EIF2D
TMEM199
POLDIP2
EBNA1BP2
CFAP57
SIRT4
RPL27
PPP1R7
PASK
EXO1
DUS3L
HMGCR
TTC4
TRAPPC4
RPS25
RHOT1
MXD3
C8orf33
RPP40
SZT2
MED8
UQCR11
CASS4
KDM5C
NAGPA
PPP6R1
TMEM181
HARS2
HARS1
TSFM
PPP1R13L
POLR1G
ZNF830
CCT6B
TIMM23
WDR43
FAM13A
WDR74
NUP155
ZSWIM8
GAMT
ARAP1
PDLIM1
GP6
LTV1
GATAD2A
GON4L
SYT11
SERP1
EIF2A
AHCYL2
ALKBH8
CEP164
TJP3
NHP2
METTL2B
HACD1
DDX39B
PRMT1
SRPK1
ZCWPW1
MEPCE
HUS1
FBXL13
ARMC10
ABCB8
PPP2R5A
ATP5MC1
MGRN1
ABCF1
CFAP69
HSP90AB1
STX12
SLC27A4
GSTM4
DHX37
DPF1
ZNF593
C1orf232
GSTA4
PPWD1
CENPK
MOK
NUP205
PRRC2B
DPP3
PPIG
YIPF3
POLR1C
TCIRG1
JMJD7-PLA2G4B
JMJD7
PLIN3
SMTN
SAMD4A
CLDN7
METTL25
CCDC59
GET3
MST1
ANXA11
ODF3B
HEXA
ADPRS
CFAP20
SLC44A1
VARS1
DDX49
COPE
ATP5MC2
EPS15
PRR5
NUDT9
HSPBP1
NAE1
PUS10
PEX13
ING3
ANKRD12
TIMM10
POP7
SRP54
HDAC6
C3orf86
SLC12A4
ALKBH2
BLVRB
ATP6V0D1
GRWD1
PCNP
MOB1B
ISG20
NPC1
SS18
FIS1
WDR55
CUTA
SYNJ2
ARFGEF2
ADK
GORAB
CCDC97
OSGEP
APEX1
HLA-E
MSANTD2
ZNF419
IFT140
CRAMP1
ZNF280A
NCKAP1L
NSUN4
GFM1
CHM
RREB1
MYBPHL
ZNF555
HAGH
FAHD1
MAD2L1BP
NARS2
TLE2
FNDC4
GCKR
SPTBN2
FANCD2
GTF3C4
DDX31
PAK1IP1
C6orf52
INO80B
AP3M1
MICU1
PSIP1
OR4F21
RBBP5
TFPT
PRPF31
EFTUD2
CCDC103
SPATC1L
SIAH2
CROCC
TIPARP
THADA
FARP2
YBEY
TCAIM
FZD1
TSEN2
PPP5D1
CALM3
CCDC86
UTP3
BOD1
UNKL
ABCC10
INPP5B
PNPLA4
VPS33A
PIGBOS1
PIGB
VPS35
KHDRBS1
TOMM6
RPS26
ADAMTS14
KAT2B
ECT2
TWNK
MRPL43
CEBPZ
N6AMT1
ZNF165
TOR1A
PRKCSH
CCDC151
WDR3
GDAP2
MRPL40
HIRA
C12orf66
TTC27
PNO1
REXO4
PHB2
CRCP
RAB39A
LRIG2
SPIDR
DPAGT1
FBXW9
ANAPC10
ABCE1
GALNT11
KANK2
SLC25A38
DYNC2I2
PLSCR2
C17orf99
BTNL10
EXOSC5
BCKDHA
MOCS3
DPM1
RNPEP
GFER
HDAC11
SGO1
DDX41
TTI2
PPIL1
PSMD14
MRPL17
ZNF557
BOLA2-SMG1P6
TIMM9
KIAA0586
C19orf53
RBM47
FCRLA
ATG16L1
CWF19L1
KPNA4
FOXK2
TBRG4
TRAPPC9
STK40
VPS26B
NCAPD3
AIM2
OR4F3
OR4F29
OR4F16
VPS50
HEPACAM2
COMMD4
LRRC29
FNTB
TIGD2
GINS3
SNIP1
CCDC83
PPP2R5B
SRP9
LMBR1
DNAJC14
TRAF1
TRIP4
NFE2L2
SH2B1
NGLY1
CHCHD3
OXSM
AATF
TUFM
RTL10
GNB1L
ISOC2
TCF3
NUTM1
NOP10
ZNF311
DHX40
MAD2L1
PPIL4
PSRC1
HSF1
BOP1
RPGR
SPAG9
SPATA24
CAD
ICAM2
ZNF575
TMEM35B
SYNJ1
PRR3
GNL1
ZNF263
ATXN7L2
VMAC
NDUFA11
HMBS
C1QTNF6
CRBN
LARP1
NAT10
KIF15
KIAA1143
COPS4
KPNB1
ATP6V1C1
MCRS1
ZNF180
IFT172
STARD10
SARAF
SLC24A1
CFAP298-TCP10L
CFAP298
GRN
EEF1AKNMT
IPO13
PRKAR1A
DDX56
PWP1
UBA52
ILVBL
C2orf49
DTX4
H4C8
POLR3B
HEATR1
DARS2
CENPL
CNPY3
SUGP2
ARMC6
BRK1
VPS37A
CNOT7
PKM
MOB3A
IZUMO4
SHFL
NCLN
S100Z
TOMM22
GCDH
ALAD
OGG1
CTH
PRRC2A
AP3D1
ODF2
YTHDF2
FAM72B
PC
HEXIM1
TM9SF4
PCYT1A
H2AZ2
PEF1
GAL3ST4
SH3D21
SMG8
TRAPPC6A
BLOC1S3
SFSWAP
RPA2
RRM2B
KLHL7
GTPBP4
DDAH2
MED11
TBCE
CEBPG
CALU
CDC37
TMPRSS9
TAMM41
CDC6
MDM4
SCAPER
KDM4A
ACOT7
B4GALT3
KCNK5
IQSEC3
COMMD9
RBM42
TEFM
DUSP12
RAD50
IFTAP
ECE1
SLC4A1
TTLL9
POLR1F
DLAT
OCEL1
NFYC
UBTD2
LOC390877
GTF2F1
PPP6R3
NTMT1
VWA7
DGCR6L
UFSP1
GYPB
NUP35
TSGA10
SLC25A32
DCAF13
MAPRE2
NDUFV1
TAF1A
PEAK1
HMG20A
PHF20
TRIM26
NDUFS7
PPT1
RNASEH1
MRPL54
TUBA1A
TCAF2
APBA3
SON
GART
SUPT4H1
MED15
TTC16
PTRH1
PHKG2
ADAMTSL5
DDX18
AIMP2
FAM98B
PMS2
PRCP
DDIAS
RBL1
SYF2
CCDC77
ARMC2
BUB1B
KDM5A
LIMS1
POLR2K
TMBIM6
SF1
ERCC6
CCDC6
CCDC167
ALDH3B1
ZNF77
WDR36
MRPL30
MITD1
H4C3
MRTO4
EMC1
AARS2
IARS1
MTHFR
CLCN6
DDX46
SPRING1
RNFT2
ZFP62
UTP6
CCRL2
PCGF5
RPS9
AMPD2
KRTCAP3
GNAT2
SPOP
INO80C
SETD1A
MSL2
PPT2
MTHFSD
CXorf56
SMIM20
SFRP5
POMGNT1
VIM
TTC31
CCDC142
AGBL3
CLTC
FAM3C
ICE1
PNPLA6
BRD3OS
GOPC
RTF2
C8orf37
EIF2B3
FAM98A
TMEM9
NDUFB3
FAM126B
ECSIT
STK11IP
RABEPK
ZSCAN2
PPP3CB
GPN2
ZNF394
B3GNT3
ZCCHC7
BBS5
RIF1
GAN
SNRNP70
DPEP2
SPINK4
ZNF813
MED25
HPCA
UTP11
DCT
KLHL12
SETDB1
DNAJC19
EXOG
ESPL1
UBIAD1
XRCC4
TMEM167A
KIAA1191
EBAG9
PALB2
DCTN5
PMPCB
MPND
ALDH6A1
LIN52
C22orf39
THBS3
NOC2L
MTX1
PRRG2
NOSIP
ELOVL6
RBM3
WDCP
TARS2
RIOK1
CAGE1
EXOSC3
TBC1D15
MYH7B
GSS
TUFT1
TMEM160
VPS52
RPS18
TTC1
PDCD7