ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11399802 | NCI-H1963
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX16386913: 293

◢ SRX3010110: A549

◢ SRX3010111: A549

◢ SRX24188777: BJ

◢ SRX24188786: BJ

◢ SRX20550182: BT67

◢ SRX20550183: BT67

◢ SRX20550184: BT67

◢ SRX20599715: Caco-2

◢ SRX20599717: Caco-2

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX10616096: GM12878

◢ SRX10616097: GM12878

◢ SRX11374678: GM12878

◢ SRX11374679: GM12878

◢ SRX3322296: GM12878

◢ SRX3322297: GM12878

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX10478224: Hep G2

◢ SRX10478225: Hep G2

◢ SRX2423815: Hep G2

◢ SRX2423816: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX2023732: iPSC derived cardiac cells

◢ SRX2023764: iPSC derived cardiac cells

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX2423402: K-562

◢ SRX2423403: K-562

◢ SRX5457481: K-562

◢ SRX5457482: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX8064823: Lymphoblastoid cell line

◢ SRX8064824: Lymphoblastoid cell line

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX11399800: NCI-H1963

◢ SRX11399801: NCI-H1963

◣ SRX11399802: NCI-H1963

◢ SRX9779520: NCI-H1963

◢ SRX4732741: Pre-B cells

◢ SRX7981741: Prostate cancer

◢ SRX7981742: Prostate cancer

◢ SRX7981743: Prostate cancer

◢ SRX7981744: Prostate cancer

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX9562892: RH-4

◢ SRX9562897: RH-4

◢ SRX19212560: SK-N-MC

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

PPT1
ZNF684
CAP1
ZMPSTE24
EXO5
TRIT1
UTP20
SKA1
RLF
RABL2B
PPIE
IQGAP3
MYCL
HPCAL4
NT5C1A
NUF2
UTP25
CCNG2
RTTN
IREB2
QTRT1
TIMM21
FBXO15
TMEM241
DHX37
BIRC5
CCNB1
EXO1
FAM72C
FAM72D
SHC1
CKS1B
RRP15
MFSD2A
SMYD5
PEX19
RBKS
BABAM2
SSH2
SPACA1
CENPN
TICRR
CRNKL1
CFAP61
FANCI
CENPW
HSPA12A
ENO4
NCAPH
TRMT1
C16orf71
ANKS3
PAX9
UNG
KNL1
POU2F1
RAD51
LRRC29
MRPL45
MOK
GTF3C4
DDX31
EDC3
TRAPPC6A
BLOC1S3
C12orf66
KIF2C
CDK7
ACVR1
TK1
AFMID
RBM19
SHCBP1
NKX2-1
PIK3C3
BLM
ZGRF1
LARP7
MIS18A
DPH1
ZNF778
WDR74
RNF187
ESCO2
GPATCH4
TRMT61A
PUS1
NPC1
PMVK
PLEKHD1
DIAPH3
CHAC1
TTK
CORO2A
CENPH
CFDP1
RHNO1
FOXM1
BMP8B
TFIP11
CCDC102B
TMX3
WDR46
PFDN6
AURKB
NBPF1
VPS41
TBC1D4
POLR3D
METTL11B
KIF14
WASHC5
NSMCE2
PMAIP1
ZFPL1
CDCA5
CDC25B
DDX11
OSBPL1A
NUDT2
KIF24
ZNF77
MFSD1
FAM72B
LRRC49
THAP10
CDC16
POLR3H
CENPS-CORT
CENPS
UBE2C
USP35
KCTD21
CCNA2
SGO2
ZNF473
VRK3
BUB1
PUM3
EPG5
TXNL4A
ASPM
RBFA
SWSAP1
ABCF1
CFAP53
ARMC2
CSNK1G1
PDE11A
CCDC39
AAAS
TRAPPC8
SLX1B
SLX1A
BOLA2
BOLA2B
BOLA2-SMG1P6
DZIP3
CIP2A
PBK
PCNP
PPIL3
NIF3L1
PHB2
LHFPL1
COMMD4
CKAP2L
SMC2
PTPRD
SLC35C2
ALKBH8
HAT1
AP1S3
ARL13B
PIF1
DPP4
NEURL2
CTSA
HEXA
TRMO
APOM
BAG6
HDHD2
SCFD2
NUP133
LACTB
MTFR2
TTC27
CEP135
TAF1A
DEPDC1
ASNSD1
ASDURF
MRM3
GLOD4
NOL6
MMUT
CENPQ
PLK4
SEMA3C
HUS1
RIOK3
PIAS3
DYRK1B
STRIP1
AIP
RECQL
GOLT1B
NME7
BLZF1
NUP214
HDAC2
HAGH
FAHD1
ZNF558
GCDH
SCAMP3
PES1
GCHFR
NKX2-8
FBXL13
ARMC10
APRT
OIP5
NUSAP1
MND1
MYDGF
RMC1
CCDC15
RASAL2
SMAD2
STAM2
PRCP
DDIAS
USP32
MOB3A
IZUMO4
PPIH
SMARCD2
MBD1
KATNAL2
TTC31
KIF20A
BRD8
CCDC142
AP1S1
ESPL1
KIAA0895
KIF18B
RIOK1
CAGE1
ANLN
COMMD6
UCHL3
PRPF38A
ORC1
BLOC1S1
DARS2
CENPL
CDC37
ZNF594
BEST1
PTRHD1
CENPO
PSEN2
APH1A
COL9A2
CYP21A2
SAXO2
EFL1
RPS3A
GTSE1
INTS7
DTL
AP1B1
CENPF
PSMC3
TMEM186
PMM2
SLF2
SPG21
CFAP299
HSPBP1
TWNK
MRPL43
MELK
TAF13
KIF23
ZNF24
TAF4B
WWP2
GRWD1
NLE1
BUB1B
WDR26
RPUSD2
PIP4K2C
PSME3
TXLNA
ATG14
UFD1
CDC45
SLC41A1
BCAS3
CEP295
MEN1
LAMP1
CCDC86
LRP2BP
ANKRD37
WDR62
THAP8
UTP23
KPNA2
GAR1
ATP5F1A
NUP35
KLHL12
RNF166
CTU2
DNAH7
ZNF202
SLC38A7
NUP107
VPS35
LSM2
SP4
GBA
THADA
ARNT
RABL2A
BROX
AIDA
PPIB
SPC24
IFT57
DHDDS
RAD51AP1
C12orf4
DPH2
C18orf32
NPAS1
NETO1
CTDP1
ATAD5
RNF125
WDR4
KAT5
POLR3F
DZANK1
RSPH3
TEDC1
PALB2
DCTN5
SNRPE
NAT10
HEATR1
EXOSC5
BCKDHA
MRPS33
RAD9A
VPS72
CAAP1
SPATA4
ADPRS
SECISBP2
ATP6V1C1
SLC39A6
ELP2
WDR7
FADS2
GTF3C2
EXOC1
CD2BP2
GATB
URB2
TAF5L
LONP2
ABCC11
FBXO5
TAF1C
RFC1
PACRGL
GINS3
RAMAC
DNMT3B
RFX3
ZNF547
TRAPPC2B
SLC38A8
GPX4
C6orf89
ARHGAP11A-SCG5
ARHGAP11A
TRIP4
CLSPN
CDC6
SFXN2
ARL3
XRCC2
CDT1
MCRS1
CYB5B
TMED5
CCDC18
PABPC1
C16orf95
SSR2
TRAFD1
TMEM248
MED23
SMG7
MRPL11
SMG5
MDH1B
FASTKD2
HEATR5B
GPATCH11
FAM72A
POC5
LYRM4
FARS2
NSFL1C
SZT2
MED8
RAP2A
RAD54L
ACTR6
MRPS28
TOM1L2
DRC3
SLF1
KIAA0825
RCL1
AARSD1
TMEM41B
KMT5A
PLS3
METAP1D
ORC2
ZWILCH
RPL4
TCF25
OBI1
ATAD2
MEA1
KIFAP3
MRRF
QTRT2
CCDC191
PEPD
POLR2J2
SH3KBP1
PNO1
PNPT1
NDFIP2
PRTG
MRPL27
EME1
FAM200B
PARPBP
NUP37
CCNB2
CHUK
MCAT
OSCP1
ADPRHL1
COMMD9
ZSCAN30
NSUN3
DHFR2
SLC35B2
H3C15
H3C14
BACH1
CCNF
RRM2
DIMT1
PPRC1
PPP1R10
MRPS18B
TRIM23
TRAPPC13
SHLD3
LEMD3
HROB
TMEM160
WBP11
C12orf60
CCT2
RPUSD4
FAM118B
CHM
ZNF507
TMEM143
SYNGR4
FBN1
C18orf21
TTC13
ARV1
TRIP13
BRD9
STARD6
C18orf54
FAM227A
CBY1
TXNL4B
DHX38
MRPS21
LAMTOR3
E2F2
ZMAT1
PCNA
C16orf46
STK11IP
CHCHD3
RBM34
ZBTB37
MON1B
CSTB
NME1
EIF2D
ZCWPW1
MEPCE
EBNA1BP2
CFAP57
PGK1
CEP162
MVD
DDX19A
TBC1D22A
MAP3K7
ZNF687
GLE1
TPX2
MMS22L
BNIP2
IBA57
IPO4
NTAQ1
VAMP4
NUBP1
MCM10
CASP7
KLC2
THBS3
MTX1
PPFIA4
BOLA1
TAF6L
RBM7
C11orf71
MRE11
ANKRD49
ADAT1
RBL2
ACAA2
ERCC5
E2F3
ZNF148
TPGS2
SLC25A44
MRPS24
TBC1D7-LOC100130357
TBC1D7
CDH2
GSTA4
LTV1
NCOA7
ABCB10
TBC1D31
NASP
MZT1
BORA
PRKAR1B
TMEM150A
CES2
CIAO2B
BCL9
URB1
DCT
DPP3
SNX1
SMC4
TOM1
IFT80
STK16
GLB1L
TSSK6
NDUFA13
SNRPA
C19orf54
DHX40
CSTF1
AURKA
BLOC1S5
DARS1
CYB5R4
TFB2M
CNST
DSCC1
RNF40
CCDC189
WDR3
GDAP2
SPATA5
NUDT6
PIPOX
KIAA2026
FAM71A
PAXBP1
DPY19L4
SASS6
MRPS15
MIA3
SLC25A36
SUGP2
ARMC6
LETMD1
NARS1
NBR1
EXOSC10
LAGE3
CTIF
NOP16
HIGD2A
NAGK
ING5
TRIP12
FBXO36
UBL5
PIGC
CXXC1
PEAK1
HMG20A
ARIH1
EIF4E
CACHD1
TM9SF2
GSN
RAB14
TBRG4
CCDC106
MRPL1
SEC11A
LAMTOR5
NEU1
SLC9A8
ARHGAP19
TIGD4
ARFIP1
ANAPC1
HASPIN
ASAH1
MFSD4B
BCL2L13
PPID
TBCE
SLC39A8
RPS29
NEIL3
ATP6V0D1
MIS18BP1
COG2
CBLB
GPR89A
METTL3
GFOD2
IER3IP1
MCM5
CTSD
SLC38A4
GTF2H3
EIF2B1
SIRT4
RPA2
ENDOV
VPS11
PPAN-P2RY11
PPAN
TCF4
TNRC6A
TTC7A
MCFD2
YEATS4
SUPT5H
METTL15
KIF18A
CDCA4
NMNAT3
VPS33A
CDC73
DMAP1
SLC7A6OS
PRMT7
TTC4
SNRPD1
GMNN
NR2C1
TCF19
CCHCR1
ERGIC2
SYNRG
NEMP1
USP53
CDC37L1
FANCM
ARHGEF39
RPP40
TMEM19
DYNC1I2
DHCR7
EDC4
SEC61A1
SERPINB8
SHISAL2B
LRRC59
C5orf51
RAD18
TMEM167B
ADSL
CCT5
ATPSCKMT
NGRN
TMEM104
NAT9
CSKMT
C11orf98
DIAPH2
NADK2
IPO11
SPRTN
EXOC8
HPS6
IFT172
FAAP24
CEP89
ZSCAN2
RNPC3
CMTR2
AKAP9
DIS3
DNAJB1
YY1AP1
DAP3
ACER2
NAXE
GEMIN4
NAGPA
SPNS1
TIMM17A
PRMT2
FBXW9
MRPL24
OTUD6B
ACADM
CCDC34
PEX2
RUSC1
AKR1B1
TUBE1
FAM229B
TOMM22
UBE2Q1
PTPN4
KCTD9
CDCA2
DNAJC10
IQCH
AAGAB
RANGAP1
CENPM
MED28
CAMTA2
SLC35A4
APBB3
NEK2
NR6A1
TTF2
ZNF276
VPS9D1
SS18
WDR81
SNX11
RPRD1A
GMDS
ALDH9A1
SIPA1L2
NEK4
UBAP1L
UBFD1
EARS2
INTS12
GSTCD
TFB1M
ARHGDIA
HCFC2
GLT8D2
RABGEF1
CDK5RAP3
EIF3C
EIF3CL
TF
TMEM87A
GANC
BTF3
CNIH4
MTHFD1L
TOPBP1
PRR19
PAFAH1B3
PFDN2
NIT1
MOSPD2
FANCB
ACOT4
LIPG
TRUB2
COQ4
KDM3A
SMIM30
MVK
TM2D1
STK36
RNF25
PPOX
GPR107
PCGF3
DZIP1
RRP12
LSG1
DDX49
COPE
WDHD1
SOCS4
USP37
CNOT9
ADCK1
FBXL12
STX4
RCCD1
WEE1
CRY1
PPP6R2
CRELD2
ALG12
AIMP2
NOL7
PMS2
RPS27L
NOC3L
MTR
RBM45
TOR1A
FARSB
KATNA1
NVL
RFX5
DOLPP1
CFAP36
NDUFB2
NUDT1
MRM2
GOLPH3L
GATAD1
DSEL
CABYR
PSMD9
HPD
OGDH
SYF2
BBS1
MINDY2
XPO5
POLH
PLK1
PISD
ZNF696
ZSWIM7
TTC19
PA2G4
RFC2
SUCO
MAP3K13
EID2B
GTF2A2
SMC1B
RIBC2
SCNN1G
ADAMTS18
PIGBOS1
PIGB
ESCO1
FDX2
DPH5
NACAD
RNF115
POLR3C
TOMM70
LNP1
CDCA3
SRSF2
MFSD11
ARPC3
DNAJC30
BUD23
SPG11
ULK3
SMC5
FCSK
BPNT1
DCUN1D2
SPOP
CPPED1
SKIV2L
NELFE
TTLL9
MRM1
SPTLC1
MRPS36
WDR35
CHRNB2
BRMS1L
RHBDD2
MRPL55
EIF6
HYKK
RDH11
ABRAXAS1
CBS
CBSL
ZCCHC7
KIAA1586
PUS10
PEX13
GTPBP10
AMZ2
DMAC2
INTS9
HMBOX1
MTF1
CEP55
ZSCAN21
COQ2
DTX2
WDR93
PEX11A
PNKP
ZNF273
IKBKB
RPTOR
MRPS18C
HELQ
FBXW8
GPN1
CCDC121
DDX42
CCDC47
EFTUD2
CCDC103
KNOP1
COA6
SNRPG
NQO1
CLN3
TMED10
RTF1
S1PR2
SULT1E1
RPS19
TDRKH
NOL8
CENPP
SUPT7L
SLC4A1AP
MTIF2
CFAP298-TCP10L
CFAP298
MDM2
YIPF2
TIMM29
RANBP6
CEP126
IFT52
MORF4L2
ZNF443
MYBBP1A
CYC1
YRDC
C1orf122
FAM222B
SEC24D
CIART
CGN
PHOSPHO2-KLHL23
PHOSPHO2
CCDC173
SELENOH
MAN2C1
PDXDC1