ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11374678 | GM12878
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX16386913: 293

◢ SRX3010110: A549

◢ SRX3010111: A549

◢ SRX24188777: BJ

◢ SRX24188786: BJ

◢ SRX20550182: BT67

◢ SRX20550183: BT67

◢ SRX20550184: BT67

◢ SRX20599715: Caco-2

◢ SRX20599717: Caco-2

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX10616096: GM12878

◢ SRX10616097: GM12878

◣ SRX11374678: GM12878

◢ SRX11374679: GM12878

◢ SRX3322296: GM12878

◢ SRX3322297: GM12878

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX10478224: Hep G2

◢ SRX10478225: Hep G2

◢ SRX2423815: Hep G2

◢ SRX2423816: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX2023732: iPSC derived cardiac cells

◢ SRX2023764: iPSC derived cardiac cells

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX2423402: K-562

◢ SRX2423403: K-562

◢ SRX5457481: K-562

◢ SRX5457482: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX8064823: Lymphoblastoid cell line

◢ SRX8064824: Lymphoblastoid cell line

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX11399800: NCI-H1963

◢ SRX11399801: NCI-H1963

◢ SRX11399802: NCI-H1963

◢ SRX9779520: NCI-H1963

◢ SRX4732741: Pre-B cells

◢ SRX7981741: Prostate cancer

◢ SRX7981742: Prostate cancer

◢ SRX7981743: Prostate cancer

◢ SRX7981744: Prostate cancer

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX9562892: RH-4

◢ SRX9562897: RH-4

◢ SRX19212560: SK-N-MC

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

GSTA4
H4C8
METTL26
CCDC107
LAMP1
FBXO31
RAB11A
HSPA6
NDUFS7
BCAR3
CCDC200
B4GAT1
DNAJB4
ANG
RNASE4
LUC7L2
FMC1-LUC7L2
FMC1
SACM1L
MYNN
ALOXE3
PSMB3
PRMT5
KMT5B
ELF1
WBP4
DCT
PPEF1
MED16
OR1F1
H2BC5
H1-4
BLOC1S1
H2AC21
H2AC20
H2BC21
H1-2
ILF2
TRIM41
TMEM259
PLEKHG2
H4C12
VPS33A
H4C11
FCHSD2
H4C3
H1-3
POLR3E
H2BC18
H3C13
H3C3
H3C15
H3C14
H3C2
ZNF839
H2BC11
H2AC11
H4C1
H3C1
WDR74
LASP1
H4C14
H4C15
KNL1
LTA4H
SMARCC2
C12orf57
HMGN4
C8orf37
DPP9
NCOA7
TIA1
SHF
POLG
C17orf97
H3C11
TRMO
H3C8
SPRTN
EXOC8
ZBTB4
POLR2A
H2BC8
H2AC8
SRSF7
XRCC5
H2AC16
H3C7
H1-5
RPL12
LRSAM1
WASHC2A
SLCO5A1
SNX16
NBN
POLDIP3
H4C9
CBX3
HNRNPA2B1
ANXA2
H2BC12
H2AC12
ZDHHC5
H4-16
WASF2
GBA
MARCHF8
PCGF1
COG6
BCLAF1
CTDP1
HEXA
H2BC4
H2AC6
POLR3B
RPLP0
MICU2
PARP2
SRSF6
HMGA1
UBE2S
DDX3X
ALDH16A1
TRA2B
SIRT4
H4C5
GTF2A1
H4C6
CBWD5
CBWD3
CBWD6
SNRPB
SMIM11B
SMIM11A
NARF
H3C12
IL4I1
NUP62
ATF5
INO80C
EIF4A3
H2BC17
H2AC17
SNRNP70
CALM1
POLR2J3
RPL28
RPL5
TXN2
H3C10
DNAJC25-GNG10
DNAJC25
CRCP
SECISBP2
POLE4
HDAC4
UBC
H4C4
EXOSC9
H4C2
CHMP4A
H3C4
LIG4
ABHD13
FSCN1
ZSCAN30
SGF29
SRFBP1
GSK3B
H2BC14
H2AC14
H2AC19
H2AC18
H3-3B
FUS
COMMD4
MIS12
DERL2
U2AF2
CASC3
PCIF1
MLH3
FTL
UQCC2
STARD7
CLSPN
POMZP3
PAXBP1
HAGH
FAHD1
COMMD1
CCT4
CBWD1
AARS2
KLF7
LZTR1
ZNF706
MRPL54
DNAJB1
ING1
NUDT15
TUBA1B
CTSO
SBNO1
SHCBP1
EIF4A2
CYP4F11
EIF3A
WASHC2C
RPS29
H2AX
TRAF7
ZNHIT2
CKLF-CMTM1
CKLF
KMT2E
EXD1
CHP1
RPP25L
C12orf65
MAT2A
POC5
MRPL17
NCOA5
DHPS
ZNF567
SUMF1
CYP20A1
NAGK
CDKN1A
ANKRD26
SLC9A1
S100A13
CHTOP
IFRD1
STAT6
SREK1
SLC3A2
RPP38
CDK11B
CDK11A
CD74
HYLS1
H2AC15
H2BC15
RPS3A
RINT1
USP42
C6orf226
SETX
RCCD1
SRSF3
INTS5
KNTC1
DNAJC9
XRN2
C2CD5
LOC100287896
LIPT2
DEPDC1B
STK35
PNKD
AAMP
FAM71E1
EMC10
PPP2R3B
STX3
GABARAP
MCRS1
B2M
ZNF335
DGKH
NAT10
TFRC
ZNF518A
RITA1
DDX54
TSR3
GNPTG
RCE1
TECR
TPCN1
IQCD
APOM
BAG6
DENND6A
GOLM2
POU2F1
ANKRD54
EIF3L
EIF3D
DAD1
CLASRP
NOL10
TCAIM
MAGOHB
LSM4
PTMA
EEF2
ZNF207
COX18
SUCO
ING5
LEO1
H2AC4
BRD2
SYCE2
PREB
XRCC2
ZNFX1
GBE1
MTHFD2
EHD1
VRK2
SPTAN1
FAM133B
H4C13
BRPF1
H2BU1
H2AW
WDR11
TMEM175
GAK
GTF3A
NEURL2
CTSA
ZNF721
PIGG
CUL7
NPRL3
H2BC13
H2AC13
ZNF720
RIPK1
EXOSC8
RPS27
RPS9
PSPC1
DAGLB
SLTM
MAP2K7
WDR62
THAP8
CALM2
RBM39
CIPC
EIF3B
WDR5B
ATF4
TBCA
PCNA
EMC4
PPIA
ZNF507
PPP1R12A
SMIM10L1
PRH1-TAS2R14
PRH1
H2BC7
H2AC7
RPL41
ACAD9
SDCBP2
ZCWPW1
MEPCE
CAP1
NCAPD2
MRPL51
CCDC12
STS
PUDP
ASF1B
PDE7A
RPL10
NASP
CSE1L
PLGRKT
SRSF10
RPF1
VHL
SMARCE1
DUS3L
ERAP1
DENR
CLCN7
H2BC9
CALR
NFYC
TIMM13
LENG8
CHMP2A
PRKRIP1
BLOC1S4
RAD50
CKS2
SPECC1L
ZAR1L
BRCA2
ZFAT
SRSF5
RPL3
UBE3A
FRG1
ZNF770
MTHFD1
MYPOP
AZIN1
P4HA1
GPR137
ARHGAP35
MTR
HMMR
NUDCD2
MRPL53
CPNE8
MED15
ZFP69B
CLK1
HIF1AN
PTBP3
TANGO6
NOA1
POLR2B
H2BC3
E2F6
UBP1
TUBGCP5
MRPL48
EPM2A
MIS18A
TTI2
SMC1A
RIBC1
GARS1
ARPC1A
VPS26C
CABIN1
DUSP1
PIGW
MYO19
TMSB4X
SLC25A28
ALKBH5
HLA-DQA1
KDM8
MICOS10-NBL1
MICOS10
CNOT11
TSPOAP1
LRP2BP
ANKRD37
VCP
QTRT2
CCDC191
SAP30BP
RECQL5
AP3B1
YDJC
BRAP
ACAD10
ZNF644
TMX1
GPATCH3
TMBIM4
FANCL
NUP214
LANCL2
IFNAR1
CR2
AP1M1
CCNT1
SPPL2A
TIMM21
FBXO15
METAP1D
NPAS4
HTR5A
GSN
RAB14
MTRNR2L2
XKR7
IQSEC3
TDRD7
MTRNR2L8
CPLX2
CAMTA1
ZNF555
NBPF1
NUF2
CYB5R4
UTP20
NOTCH2NLC
RRP15
NOTCH2NLB
NOTCH2NLA
NME1
CRNKL1
CFAP61
SLC35A4
APBB3
RBM48
PEX1
FANCD2
UTP25
TIPARP
ZNF77
ARCN1
KCTD18
KXD1
TRMT1
ZMPSTE24
PDE4DIP
NAGPA
RNF187
AHCY
PSMD9
HPD
YJU2
PPT1
TMEM248
COPS7B
STX16
HPCA
RBM19
TRIP4
RPS19
IBA57
QTRT1
TMEM242
SCFD2
POLR3H
CRBN
EXO1
SPNS1
SSBP1
DHDDS
WASHC5
NSMCE2
TTLL4
CELSR3
EIF2D
ZEB1
BARHL1
UBFD1
EARS2
RAB37
ITGB3BP
EFCAB7
ZCCHC7
SNAP25
SLC39A3
TTC26
IQGAP3
FBRS
PWWP2A
USP35
KCTD21
RBBP5
MARCHF4
TDRKH
METTL1
EEF1AKMT3
DCUN1D2
VPS50
HEPACAM2
CCNG2
IDH3B
RABL2B
SOD2
NEK2
OSCAR
NDUFA3
SMG8
SPATA2
IPO4
CHGB
EPHA10
TPH2
COMMD2
NOL8
CENPP
TIGAR
GATB
NFE2L2
NBPF15
MTFR2
LARP1
WDR4
TIMM17A
FAM72C
FAM227B
DTWD1
CDK7
SARS1
BNIP3L
BIRC5
KAT5
SLX1B
SLX1A
BOLA2
HIBADH
SVOP
BOLA2B
SUPT7L
SLC4A1AP
SPOP
SF3A3
MTF2
HMGB1
WTAP
TRUB2
COQ4
SEC31A
RFX1
POLR3F
DZANK1
CPPED1
N6AMT1
EIF1AD
BANF1
KLHL18
KIF9
PI16
NCAPH
PSME3
SLC12A9
RTTN
WDR36
SLC45A4
NUP107
PAFAH2
THAP9
TXLNA
CBLL1
MRM3
GLOD4
METTL25
CCDC59
NDUFS3
KBTBD4
CCDC88A
MRPL27
EME1
KDM3A
CDK5RAP1
GTF3C3
EBAG9
FNBP1
SMYD5
RTF2
L1CAM
MFSD1
PRRC2B
DRG2
INTS12
GSTCD
KLHL22
DHX40
BCAS3
ATR
ASF1A
NSUN4
VTA1
NMBR
DNAJC5
BOLA2-SMG1P6
YTHDF2
YARS1
STAM2
COMMD9
NEIL3
MAPK8IP2
FAM72D
CRKL
FAM72A
PEX3
ADAT2
ZNF684
PLEKHM3
UTP11
RBM28
CSTF1
AURKA
TRAPPC6A
BLOC1S3
SLC25A51
USPL1
MTRNR2L9
TSFM
TBRG4
NRL
DCAF11
RRP12
TMEM199
POLDIP2
PDE4A
OGDH
DDX18
KLHL20
S100PBP
UBE2L3
MRPL40
HIRA
C16orf71
ANKS3
NOP16
HIGD2A
MRPL44
MTIF2
HUS1
CCDC146
ATL3
STAT3
NOS3
KIAA1586
C12orf66
STX18
LRRC29
TOMM22
HNRNPD
NUP35
ZFPL1
CDCA5
RFC1
FBXO5
CKAP2L
CWC25
ATP6V0D1
CMSS1
PGAM5
TRIAP1
KIAA0895
DPY19L4
FBXL13
ARMC10
USP54
TOP3B
CCNA2
VIM
ABCB8
GTF2H3
EIF2B1
MED23
INTS7
DTL
CCDC86
SNRPE
ACVR1
VPS37D
GOLGA7
DZIP3
CIP2A
SUPV3L1
SASS6
TTC31
LRRC59
TRMT6
MCM8
MRPL45
TTC27
CENPS-CORT
CENPS
KIF20A
BRD8
COX16
CCDC106
SGO1
NDUFAF5
ESF1
TFB2M
CNST
PGBD5
GRWD1
ADPRS
PMVK
PUS10
PEX13
LTV1
EBNA1BP2
CFAP57
RGL1
PFDN4
EDC3
MTBP
MRPL13
PIKFYVE
UTP3
ZC3HC1
GDAP1
TBC1D19
ATG14
SLC24A1
CACTIN
GTF3C4
DDX31
SSNA1
ANAPC2
PHOSPHO2-KLHL23
PHOSPHO2
CCDC173
NOL6
HDAC2
OPA1
ZC3H15
URB1
P2RX6
CFAP298-TCP10L
CFAP298
RAD51
ARPC5
TFB1M
GPATCH4
PIGU
GTPBP10
GTF2H4
CFAP54
C5orf51
FAM228B
NUCKS1
TMEM186
PMM2
CDC73
RBM42
PRMT2
RPTOR
CCNL1
PPIL2
AIMP2
NMNAT1
LZIC
NLE1
TOMM40
C8orf33
UBE2O
AANAT
RABGAP1L
HEATR1
EXOSC5
BCKDHA
NOTCH2
DCLRE1B
AP4B1
TMEM41A
TACO1
THAP7
DHX37
RABEP2
PPWD1
CENPK
TATDN3
NSL1
NUP54
TFPT
PRPF31
RGPD2
RGPD1
TTC21B
IREB2
CNOT4
MRPS15
WDR46
PFDN6
COASY
RBKS
BABAM2
ARFGEF2
NOL7
POLR3D
FAM98B
MRPS23
UBE3B
KCTD10
YIF1A
TSN
TEFM
KIF18B
ATP5F1E
ING3
KLHL32
TIGD1
EIF4E2
ZNF830
CCT6B
MTERF4
KIF15
KIAA1143
SMIM12
RRM2
ZNF558
UFD1
CDC45
CENPF
RUVBL1
PPP6R1
EIF3F
FXN
GATAD2A
UBE2Q1
PAK1IP1
FAM72B
C6orf52
CCDC142
MRPS33
TRMT61B
PUM3
CLK3
NR6A1
SRSF11
CDC25B
PMS2
ACVR2A
PNO1
GCDH
SKA1
RPS27L
SELENOH
SFSWAP
GFM1
MMAA
GON4L
USP2
RLF
STAT1
BNIP1
SLC25A26
CEP135
MIA3
TAF13
TAMM41
POM121
RPAP3
TMEM222
MRPL30
MITD1
C16orf87
DSTYK
ZGRF1
LARP7
DSCC1
EIF2B3
RPS7
TBP
PSMB1
PRCP
PARL
PTPN4
CFAP299
ANKRD12
CYRIB
NTAQ1
SF3B6
MRPL1
SLC33A1
GLRA1
MCM7
AP4M1
PFKM
WDPCP
MDH1
FAM98A
RIMBP3B
TFIP11
ZNF165
AAR2
ABCB6
DDIAS
PSMD3
PGK1
ARHGDIA
INO80B
PRAME
ATAD2
ESCO2
DDX41
KLHL12
VPS45
BLCAP
RPL27
H6PD
TOP3A
SMCR8
DNAJC11
TMED1
RRS1
SUGCT
MPLKIP
TSGA10
TMEM181
SNX17
G6PC3
EIF2B4
CCT2
OXNAD1
DPH3
SYNJ1
RBL1
ESYT2
C2orf42
CZIB
KIF2C