ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5090184 | GM12878
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◢ SRX017710: CD4+ T cells

◣ SRX5090184: GM12878

◢ SRX10475642: Hep G2

◢ SRX10475643: Hep G2

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◢ SRX9932062: MCF-7

◢ SRX9932063: MCF-7

◢ SRX9932064: MCF-7

◢ SRX9932065: MCF-7

◢ SRX9932066: MCF-7

◢ SRX9932067: MCF-7

◢ SRX9932068: MCF-7

◢ SRX9932069: MCF-7

◢ SRX9932070: MCF-7

◢ SRX9932071: MCF-7

◢ SRX9932072: MCF-7

◢ SRX9932073: MCF-7

◢ SRX9932074: MCF-7

◢ SRX9932075: MCF-7

◢ SRX9932076: MCF-7

◢ SRX9932077: MCF-7

◢ SRX23330419: MDA-MB-231

◢ SRX23330420: MDA-MB-231

◢ SRX23330421: MDA-MB-231

◢ SRX23330422: MDA-MB-231

◢ SRX23330424: MDA-MB-231

◢ SRX23330425: MDA-MB-231

◢ HDAC6: STRING

MAMDC2
MTRNR2L2
MSH3
DHFR
MTRNR2L8
MTRNR2L1
WDR74
STX5
DUX4
LOC102724770
DGCR6
ARL4D
MYH11
DLL3
FRG2C
SPAAR
HRCT1
FBN1
TMEM210
LRRC26
MUC3A
ZNF229
KCTD1
FRG2
TUBA1A
TRIM2
CEBPD
ZNF285
MTRNR2L9
TMEM17
JAKMIP1
PHRF1
EAPP
BCAT1
KIF5C
FGF18
EPN1
TAF12
CCDC200
PARP16
TMEM107
IL32
NR2C1
CEP295NL
EOMES
SNX16
HRK
C20orf204
ACE
SRSF7
EGR2
GJD3
RASSF5
FAM78B
TRRAP
TMEM130
MAD2L2
DRAXIN
JPT1
PTK7
ATOH8
EIF4A3
FUS
ARHGAP45
MICAL3
TACR1
SLITRK3
ALKAL2
TBL3
RPS2
RNF151
NDUFB10
RPL3L
MISP3
RGPD2
RGPD1
RPS6KA4
BFSP1
KSR2
SIRT4
TRAF7
RAB26
NPPC
TMEM242
ZBTB4
SLC35G6
POLR2A
CASZ1
TCF7L2
ARSI
DYSF
ITGB3
PMF1-BGLAP
PMF1
FAM43B
RAB20
ARMH4
MRPL23
MAPT
MAPKAPK5
AMZ2
NEU4
ZNF593
FAM110D
C1orf232
ACOT6
RPLP0
GCN1
SLC24A4
CDX2
ADAMTS9
MYLIP
ANKDD1A
WNT5A
OXCT2
SYNM
ART1
MRPS26
GNRH2
ARHGAP44
HEXIM1
DHH
PAX4
CACNB2
SLC27A2
PEAK3
H4C14
H3C15
H3C14
H2AC19
H2AC18
RBM20
FLT3
THEM6
RUBCNL
RIPK1
CHST11
SLC20A1
ZMYND10
RASSF1
NPRL2
MACIR
TRADD
NOL3
HSF4
FBXL8
UQCC3
LBHD1
CSKMT
C11orf98
EEF2
POLR3F
DZANK1
ERICH5
EPHA3
NDUFAF3
IMPDH2
DALRD3
XXYLT1
HOXB2
EPCAM
SV2C
PDGFRA
NRCAM
FSCN1
ADARB1
POLDIP3
GRAMD1B
PTF1A
ACOT4
SPATA9
RHOBTB3
GALR3
TSN
OPRD1
SYT17
BTG1
KCNB2
EFCC1
CFAP92
SOCS3
SCD5
DOCK8
FAM174C
CIRBP
C1orf21
RPLP1
EIF4E3
PIK3CD
SRSF12
GPR27
FAM151B
MAP1B
TSEN34
RPS9
RPL3
NEURL1B
DOCK10
RPS12
UTRN
NWD2
GTF2A1
CACTIN
PDE4A
STOX1
TUBGCP5
SLC16A14
OLFML2B
H4C12
H4C11
H2BC15
H2AC15
MAT2A
FJX1
NEUROD2
TEX45
GALNT18
SLC25A27
INTS6
CYP39A1
TSPAN5
RPS27
RAB13
UBE2M
DDAH1
CHMP2A
CALM1
BHLHE41
TMOD2
TFRC
RORB
LYSMD2
AMZ1
EMILIN2
SPINT1
HMBS
H2AX
DPAGT1
SLC9A1
CEBPB
TBXT
SUSD5
SLC9A3R2
MEIS1
ST8SIA5
PTPRG
PTH2
PCDHGC4
PCDHGC3
NPW
GFY
GADD45B
BCAR3
PIP5K1B
KCTD12
LHX4
IQGAP2
NKX1-1
UBE2S
MEF2C
KCNMA1
SVIL
NOTCH2NLC
NOTCH2
VASP
RTN2
PPM1N
FGFR1
AFAP1
SLCO4A1
MRC2
ICA1
HHAT
GAD1
PRSS56
GFOD1
TEX15
CHRND
HACD1
EDARADD
MATK
CD24
ABTB2
MBD6
DDIT3
TUBA1C
UBC
LCMT2
EEF1AKMT2
DZIP1
ADAL
ABRAXAS2
HNRNPA2B1
CBX3
ARRDC2
IL15RA
HELT
DDX3X
NBPF1
HSP90AB1
TTYH2
RPL38
CALHM6
PSMA7
H4-16
H2AJ
FRMD6
HSP90AA1
MPPE1
CD74
REXO1
EIF4A1
CD68
SRSF3
GAS1
KANK3
H1-2
ACOT1
ERO1B
H4C15
KANK1
DGKH
RAD23A
CALR
NXF1
UNC5C
P2RY1
LRP11
FARSA
CCL28
HNRNPH1
RPS4X
SFRP5
PFKFB3
UNK
H3-3B
MMP28
KLHL35
CDCA7L
ACOT2
PRDX1
RPS20
SIX1
PROS1
ARL13B
MAPK11
JAK1
PDGFD
RASL10A
NRARP
INSM1
GAS2L1
FAM43A
RPS6
TFCP2L1
SRSF6
ARX
ZBTB37
GTF2B
CHN1
THOC3
SPTAN1
PDE4C
RASGRF1
JUNB
H2BC4
H2AC6
TMEM51
SPRED3
RPS26
GGN
FAM98C
SPATC1L
UBB
SHISA3
LRRFIP1
SKP1
RASD1
PTPN5
EIF4A2
KIF2C
ZCWPW1
PPP1R35
MEPCE
SEMA6A
PHLDA3
KCTD15
KCNA6
HMGA1
LTBP1
RPS3
NTRK2
FOSL2
BIN1
AMOTL2
NME6
EIF1
DNAJB4
HFM1
GOLGA5
DAB1
H2BC14
H2AC14
DUSP1
PLPP3
SCRT1
R3HDM4
KISS1R
GCNT4
DGAT1
ARID3A
TMEM229B
PLEKHH1
GLS
SNORC
B2M
RNF4
QDPR
DIPK1C
CLRN2
RABL2B
RIMBP3C
RIMBP3B
KDM4A
H2BC5
H1-4
H3C6
H2BC8
H2AC8
NAAA
KIAA1549L
GLB1L3
DNAJC25-GNG10
DNAJC25
ZNF720
CYP24A1
CLASP2
ATF4
CBR3
RIOX1
ADRB2
TMEM259
CNN2
ARHGAP42
RGS6
TRMO
GEMIN4
ZNF277
DOCK4
SMTNL2
PHACTR2
CAMK2N2
ZC3H10
RPL41
SURF2
SURF1
RPL7A
MED22
KLF1
GCDH
DNASE2
C19orf48
PTPN6
C12orf57
H2BC21
H2AC21
H2AC20
SLC30A3
LAP3
H1-10
DLX1
APTX
DNAJA1
LBH
TMSB4X
EIF4G2
GNB4
CFAP73
SIX5
SIX4
CSRNP2
FGFBP3
VSIG8
POLR3D
GJA3
FZD2
ENDOD1
FAM53C
CDC25C
TMSB10
RPL22
RNF207
RNF125
WNT11
H4C3
H1-6
TNFRSF1B
MT3
MIIP
CCNL1
PAH
OAF
ELOVL7
ASCL1
PPP1R10
MRPS18B
CALM2
SLC3A2
INPP1
CYP26C1
CYP26A1
B3GAT2
HOXA3
SH3RF3
POR
LSR
HOXA9
HOXA7
HOXA6
SFRP4
PLXND1
HLA-DQA1
EPDR1
C6orf62
POLR2J
IER5
VAMP1
TPCN1
IQCD
GPX1
ATP6V1FNB
ATP6V1F
CBWD5
LDHA
ZNF853
NSMCE4A
KIAA1614
GPR157
TPBGL
FTL
AADAT
HSPA1B
HEXB
RPS11
RPL13A
PRRG4
RPL32
ENOX1
BBC3
SLC43A1
LENG9
BMP2
HIBADH
RPS27L
GDF1
CERS1
ZC3HAV1L
ADRB3
ZBED3
TMEM238
TMEM190
RPL28
SLC27A3
NXPH3
IRF8
SPSB4
HR
IER5L
CLIC6
SRSF5
RHOB
H4C2
H3C2
H2AC4
H4C1
H3C1
H1-1
RELT
CLTA
GREB1
IGFBP4
TFF1
CASP7
TMEM104
NAT9
IL24
TMIGD3
ADORA3
IER3
FLOT1
TSKU
PDZK1
RARA
MYOG
FKBP4
SLC25A25
NAIF1
STARD10
HSPB8
PARD6B
FAM174B
OSGIN1
NBPF4
PRLH
SBNO2
NBPF6
ADAMTSL5
DCAKD
PPP2R2C
CDC42EP1
LGALS2
FILIP1L
VASN
FREM2
YIF1B
KCNK6
RNF223
SPINK4
RPS6KL1
LMAN1L
CPLX3
SLC22A5
GSG1L
DGKZ
RAPGEFL1
N4BP3
ST8SIA6
OVOL2
TPD52L1
SCOC
AMBP
TH
INS-IGF2
INS
MLPH
SGK3
SYT12
ARPC1B
CANT1
C1QTNF1
ATP6AP1
TTC39A
DNASE1L1
UBE2T
CYP1B1
HAAO
RET
FOXK1
CHPT1
SNX24
CELSR2
BACE1
CCDC88C
CAP2
SFXN2
ARL3
ATP8B1
CDH1
YBEY
MCM3AP
TIPARP
CTBP1
NAV2
SLC25A24
MCF2L
KRT37
OTUD7B
AKAP1
C19orf33
KDM4B
MAP3K14
MANEAL
PPARGC1A
MSLN
PTPA
CRAT
NFKBIA
NEMP1
NAB2
SLC9A3R1
FASN
SRRM2
NHSL1
IL19
PADI4
B3GNT6
MAMDC4
EDF1
CTAG2
LY6E
ARMCX6
ARMCX3
HAPLN2
C1QTNF6
USP31
PDGFA
ZNF185
SLC7A5
KRT8
HEG1
ITPK1
CXXC5
FAM102A
MYB
MSMB
MYEOV
GPRIN1
STK11
APOC3
APOA1
HAUS1
ATP5F1A
UPF1
PDE4DIP
LRRFIP2
XAB2
ESR1
CABLES2
LAMC1
SEC14L6
CLIC3
MIDEAS
SLC25A45
FRMD8
PGLYRP2
SPTBN4
BLVRB
DOK7
SERPINF1
RGS10
KEAP1
TFAP2C
ALX4
LYPD6B
AFF1
VPS26C
OLFML3
IPPK
CRKL
KRT85
FBP1
ALDH3B1
UMODL1
CST6
TMEM92
CCN5
PLIN5
LRG1
GPR37L1
RAB40C
SEPTIN9
CELA2A
DMRT2
TBX2
LRRC56
HRAS
KIF21A
UNKL
ADAM8
KIAA0319
SYT8
SPOP
DECR1
TIFA
CUEDC1
FCGR2B
CELA2B
ABCD4
PAK4
PKP3
FST
SLC25A36
SLC25A42
CTSD
CBWD3
CHSY1
CALCR
UHRF1
C1orf162
FMN1
VWA2
EPS15L1
INSYN1
CSAD
MRFAP1
ELF1
CBWD6
CCR6
ARHGEF18
PRR5-ARHGAP8
PRR5
CA12
KRT19
ABAT
KLF16
FOXK2
MAD1L1
LONP2
ABCC11
SPATS2L
ACSS1
TJAP1
MIOS
CCDC198
GRIK3
DHX37
BRI3BP
PLCD3
ACBD4
RHOD
BDKRB1
KAZN
ZNF79
MICOS10-NBL1
MICOS10
EHF
SLC25A47
TTC6
FOXA1
MACC1
EREG
ZFP36
PLEKHG2
DNPEP
SNAI1
GRM4
COLEC12
ADGRG1
B4GALT1
UGT2B15
LRP5L
TRH
TCIRG1
NDUFS8
GPC6
COPS8
WWC1
RECQL4
MFSD3
LRRC14
PSD4
SERPINA1
CERS2
ANXA9
RCOR3
LATS1
CDK3
KAT6B
ARHGEF10L
ACACB
SLC25A1
BMP7
EBF4
RPS28
NDUFA7
FUT4
C16orf74
SGCA
TPD52L2
NFIB
TMCC1
ATP13A3
MFSD10
PPP1R12B
ABHD16B
NPEPPS
YPEL2
SIAH2
RERG
CAPN12
ASB2
NMNAT1
LZIC
AGR3
ISYNA1
SYNPO2L
AGPS
TMED8
SAMD15
ALG8
SYNE3
HDAC11
COL23A1
CDH26
MRGPRG
MANBAL
FAM187A
ANKRD2
ACIN1
GPSM1
CBFA2T3
IL2RB
KLK14
IKBKG
G6PD
ELAPOR1
C1orf194
FGR
ARAP3
CTR9
SULT2B1
SLC26A1
IDUA
DSN1
PTGES
ZBTB46
RGL3
ANKH
ATP6AP2
VCAN
EFHD2
TNNI2
RETREG1
GFAP
PLEC
ETNK2
SP2
MGAT3
TNS1
SEMA3B
VEPH1
SYNJ2
ZNF346
CHST8
UQCC2
EDN1
PTPRN2
ABHD2
MYZAP
GCOM1
TLE1
NIPSNAP2
FAM228B
TTC9B
CCNP
RABGEF1
DHRS3
B3GALNT1
NT5DC3
MUC1
TP53I3
SF3B6
SERPINA6
KCNIP2
ST3GAL4
P2RY2
MAPKAPK3
CISH
PNKD
FAM214A
SVEP1
NRP1
SLC35E2A
LIMS1
TBKBP1
PRUNE1
MINDY1
CFAP206
UBALD1
MGRN1
PERP
NXNL2
SLC25A19
ORAI2
TSSC4
ARID5B
LRRC58
NPIPB9
SHC2
ZBTB45
SLC27A5
GZMM
CDC34
PRSS27
GDF15
LOC102723996
ICOSLG
TBX1
NDRG1
PXDC1
CASTOR1
MAT1A
TFAP2A
CSF3
PLXNB1
AKNA
TUBA3D
SIDT2
SURF4
NFE2L1
CYP4F2
NXT1
WNT16
SCGB3A1
MAGI3
SUSD3
RTN1
FOXN1
COMTD1
REM2