ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9932066 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◢ SRX017710: CD4+ T cells

◢ SRX5090184: GM12878

◢ SRX10475642: Hep G2

◢ SRX10475643: Hep G2

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◢ SRX9932062: MCF-7

◢ SRX9932063: MCF-7

◢ SRX9932064: MCF-7

◢ SRX9932065: MCF-7

◣ SRX9932066: MCF-7

◢ SRX9932067: MCF-7

◢ SRX9932068: MCF-7

◢ SRX9932069: MCF-7

◢ SRX9932070: MCF-7

◢ SRX9932071: MCF-7

◢ SRX9932072: MCF-7

◢ SRX9932073: MCF-7

◢ SRX9932074: MCF-7

◢ SRX9932075: MCF-7

◢ SRX9932076: MCF-7

◢ SRX9932077: MCF-7

◢ SRX23330419: MDA-MB-231

◢ SRX23330420: MDA-MB-231

◢ SRX23330421: MDA-MB-231

◢ SRX23330422: MDA-MB-231

◢ SRX23330424: MDA-MB-231

◢ SRX23330425: MDA-MB-231

◢ HDAC6: STRING

GREB1
PARD6B
CASP7
IGFBP4
TFF1
TMIGD3
ADORA3
IL24
MYOG
PDZK1
TMEM104
NAT9
TSKU
SLC25A25
NAIF1
IER3
FLOT1
NBPF4
RARA
FKBP4
NBPF6
HSPB8
STARD10
OSGIN1
SBNO2
FAM174B
PRLH
FILIP1L
FREM2
ADAMTSL5
PPP2R2C
RNF223
SPINK4
LMAN1L
CPLX3
YIF1B
KCNK6
TPD52L1
OVOL2
VASN
DCAKD
YBEY
MCM3AP
SLC22A5
SGK3
NAV2
CYP1B1
AMBP
GSG1L
ST8SIA6
CANT1
C1QTNF1
RPS6KL1
CDC42EP1
LGALS2
CHPT1
CELSR2
ATP6AP1
DNASE1L1
RET
DGKZ
SCOC
MCF2L
N4BP3
DUX4
TH
INS-IGF2
INS
TMEM229B
CDH1
SFXN2
ARL3
MLPH
CTBP1
RAPGEFL1
SYT12
PPARGC1A
NBPF1
CAP2
CCDC88C
PLEKHH1
HAAO
UBE2T
HEG1
TTC39A
BACE1
ARPC1B
B3GNT6
PTPA
CRAT
IL19
KDM4B
SLC7A5
MYEOV
KRT37
PDGFA
CTAG2
AMZ1
MAP3K14
SLC25A24
HAPLN2
PDE4DIP
SNX24
TIPARP
XAB2
ARMCX6
ARMCX3
KRT8
ACOT6
UPF1
UMODL1
C19orf33
TFAP2C
LOC102724770
DGCR6
SLC9A3R1
MANEAL
SRRM2
STK11
ATP8B1
DHX37
BRI3BP
C1QTNF6
FASN
USP31
C1orf162
NEMP1
NAB2
LY6E
FOXK1
AKAP1
PADI4
FBP1
CXXC5
HAUS1
ATP5F1A
EREG
NHSL1
SEC14L6
LRRFIP2
RGS10
GPR37L1
ITPK1
SERPINF1
MAMDC4
EDF1
IPPK
FRG2C
LAMC1
MSLN
ZNF185
DECR1
DMRT2
SLC25A45
FRMD8
NFKBIA
ESR1
MIDEAS
DOK7
APOC3
APOA1
SEPTIN9
SYT8
CLIC3
KIAA0319
MAD1L1
AFF1
SMTNL2
CABLES2
VWA2
MYB
KRT85
MRFAP1
NFIB
VPS26C
CBWD5
CBWD3
CBWD6
CCDC198
CELA2A
MSMB
FAM102A
UHRF1
FMN1
FOXK2
SPOP
OTUD7B
ACACB
KRT19
LONP2
ABCC11
SPTBN4
BLVRB
CRKL
EPS15L1
FST
LATS1
CCDC200
MTRNR2L1
GPRIN1
FRG2
PGLYRP2
KEAP1
ALX4
LYPD6B
OLFML3
ALDH3B1
CST6
TMEM92
CCN5
PLIN5
LRG1
RAB40C
TBX2
LRRC56
HRAS
KIF21A
UNKL
ADAM8
TIFA
CUEDC1
FCGR2B
CELA2B
ABCD4
PAK4
PKP3
SLC25A36
SLC25A42
CTSD
CHSY1
CALCR
MAPT
INSYN1
CSAD
ELF1
SPATC1L
CCR6
WDR74
STX5
ARHGEF18
PRR5-ARHGAP8
PRR5
CA12
ZBTB37
ABAT
KLF16
SPATS2L
ACSS1
TJAP1
MIOS
MTRNR2L2
MSH3
DHFR
GRIK3
MAMDC2
PLCD3
ACBD4
RHOD
BDKRB1
KAZN
ZNF79
MICOS10-NBL1
MICOS10
EHF
SLC25A47
TTC6
FOXA1
MACC1
SLC9A3R2
PDE4C
ZFP36
PLEKHG2
DNPEP
SNAI1
GRM4
COLEC12
CLASP2
ADGRG1
MTRNR2L8
B4GALT1
UGT2B15
LRP5L
TRH
TCIRG1
NDUFS8
GPC6
COPS8
WWC1
RECQL4
MFSD3
LRRC14
PSD4
SERPINA1
CERS2
ANXA9
RCOR3
CDK3
PRDX1
KAT6B
ARL4D
ART1
ARHGEF10L
SLC25A1
BMP7
EBF4
RPS28
NDUFA7
FUT4
TUBA1A
C16orf74
SGCA
TPD52L2
TMCC1
ATP13A3
MFSD10
PPP1R12B
ABHD16B
NPEPPS
YPEL2
SIAH2
KIF5C
RERG
CAPN12
ASB2
NMNAT1
LZIC
AGR3
ISYNA1
SYNPO2L
AGPS
TMED8
SAMD15
ALG8
SVIL
SYNE3
HDAC11
COL23A1
CDH26
MRGPRG
MANBAL
FAM187A
ANKRD2
ACIN1
GPSM1
CBFA2T3
IL2RB
KLK14
IKBKG
G6PD
ELAPOR1
C1orf194
FGR
ARAP3
CTR9
SULT2B1
SLC26A1
IDUA
DSN1
PTGES
ZBTB46
RGL3
ANKH
ATP6AP2
VCAN
EFHD2
TNNI2
ZNF285
RETREG1
GFAP
PLEC
ETNK2
SP2
MGAT3
TNS1
SEMA3B
VEPH1
SYNJ2
ZNF346
CHST8
UQCC2
EDN1
PTPRN2
MUC3A
ABHD2
MYZAP
GCOM1
TLE1
NIPSNAP2
FAM228B
TTC9B
CCNP
RABGEF1
DHRS3
B3GALNT1
PMF1-BGLAP
PMF1
NT5DC3
MUC1
TP53I3
SF3B6
SERPINA6
KCNIP2
ST3GAL4
EAPP
P2RY2
MAPKAPK3
CISH
PNKD
FAM214A
SVEP1
NRP1
SLC35E2A
LIMS1
TBKBP1
PRUNE1
MINDY1
CFAP206
UBALD1
MGRN1
PERP
NXNL2
SLC25A19
ORAI2
TSSC4
ARID5B
LRRC58
NPIPB9
SHC2
ZBTB45
SLC27A5
GZMM
CDC34
PRSS27
GDF15
LOC102723996
ICOSLG
TBX1
NDRG1
PXDC1
CASTOR1
MAT1A
ADARB1
TFAP2A
CSF3
PLXNB1
AKNA
TUBA3D
SIDT2
SURF4
NFE2L1
TMEM210
LRRC26
CYP4F2
RGPD2
RGPD1
MTRNR2L9
NXT1
SPAAR
HRCT1
WNT16
CCNL1
SCGB3A1
MAGI3
SUSD3
RTN1
FOXN1
COMTD1
PHRF1
REM2
LONRF2
LOC100130520
CD300H
C17orf77
TUBA3E
SLC43A2
COX7A2L
WDR90
MCRIP2
METTL26
GZF1
EPB41L1
APTX
C20orf203
RTEL1
ZFYVE28
NEFH
CFAP99
DNMT3A
EIF5AL1
TST
MPST
SDC4
SHANK2
MTRNR2L10
LFNG
SLC1A5
DNAJC5B
SCARB1
ELOVL2
TTC39C
EMILIN2
DNAJA1
POLR3F
GOLM1
DZANK1
CPA6
DOT1L
ADORA1
EPN1
FIGNL2
USP17L21
USP17L20
USP17L12
RNF144A
TAX1BP1
TMEM95
KCTD11
DNM2
PCYT1A
IER5L
STMN3
BOD1L2
CYP4F11
MYLK2
TMEM212
NR2F2
ARHGEF16
HK1
USP17L22
PLCB1
GRAMD1A
PTPRR
CCR7
TMEM242
IL20
UNC45B
NLE1
LEMD2
ROBO3
ERN1
KLK12
LIMS4
TXNRD1
FBXW8
PTH1R
HSPA4
KLK13
RPS6KA2
CDR2L
SPRY4
SPTB
USF2
TRIM48
RFX1
ELFN2
TDRD9
ATP5MPL
TAF12
FSIP1
ITGB5
OBSL1
INHA
CLCN4
ZNF710
TSEN54
CASKIN2
MFSD6
AP1B1
SLC45A4
DDX10
NLK
RIPPLY1
CLDN2
SLC37A3
RAB19
DHRS2
HNRNPL
ATXN1
FGFBP2
FAM3B
TSPEAR
KRTAP10-12
BAMBI
LPCAT1
RGS12
ACOX3
RNF170
HOOK3
GINS3
JPH2
DMPK
MAPK13
LTBP1
RNPEPL1
OSBP
DUSP28
ANKMY1
CRYAA2
CRYAA
DLG4
FRMD5
RCAN1
C3
CDC42EP3
CCDC9B
CDH18
EXT2
TBXA2R
MIDN
JUP
CALML5
TTLL6
PI4KB
MARCHF10
P2RX4
RHOBTB1
TBC1D14
ACADVL
DDX47
EVI5L
RALGPS2
MTRNR2L6
NT5C2
DEF6
ADCY5
NR2F6
SDC1
SLC29A1
MYMX
GPRC5A
ZBTB7A
FABP3
ABR
FAM184A
IMMP2L
PLEKHF1
BCL3
DNAJA4
ATG9B
ABCB8
UBL4A
SLC10A3
NBPF15
HSP90AB1
OAZ3
PABPC1
RGS3
HKDC1
CALHM4
ME3
DLC1
ZMYND11
APOA4
PPL
NAIP
UBE2H
SNX10
KRT13
FADD
OXT
TOM1L2
HSPB1
DRC3
MTA1
SLC6A6
NBPF12
HOMER2
EHD1
RMND5B
SIN3B
ANXA2
PRSS22
RPL13
NCAPH
ITPRIPL1
ARFGEF2
FNIP2
KLRF2
CIC
NTMT1
PDLIM2
GATAD2A
TP63
PMEPA1
ITGB2
RBM43
VWA1
TMEM88B
SSTR2
CHD9
ZNF687
TWF2
PPM1M
H4C14
H3C15
H3C14
FOXO6
C9orf50
ZNF552
PARP16
MAPKAPK5
MEF2A
PPP2R5E
PABPN1
KCNH7
PRDM4
ASCL4
SLC35E1
ASPG
POLDIP3
TPTEP2-CSNK1E
FAM234B
JARID2
H4C15
TRMT10B
LGR6
SHCBP1L
ZNF385B
ATP4A
FARSB
FUT7
CST9
C9orf139
ABCA2
SLC37A1
TRPM7
ZBTB7B
RABL6
CCDC183
USP17L13
RGS19
OPRL1
LKAAEAR1
ZNF746
TSPAN5
BHLHE40
RAI14
PCIF1
FBH1
ANKRD16
PAX9
EOLA1
IL1F10
TMEM147
HSFX3
TPBG
ZSWIM6
CRK
BAIAP3
CDH11
PTP4A2
CAND1
ZNRF2
NPIPA3
NPIPA2
AMOTL2
ARHGAP29
PTMA
TEX36
ATG16L2
NDRG4
B3GNT3
SETD2
ENTPD8
PALLD
PLA2G10
PAQR5
STC2
HSFX4
EOLA2
PGF
H2AC19
H2AC18
HUWE1
ABCA3
TMEM107
EPPK1
RASEF
SH3GLB2
MIGA2
PADI3
MTUS1
LARGE1
SULT1A4
SULT1A3
FUS
FYB2
SPATA9
RHOBTB3
TNK2
GLRX5
ZNFX1
PDCD6IP
AFAP1
MERTK
ZMYND8
SLC2A12
ATF4
CIB2
RAB31
ABCD3
RPEL1
TJP3
SIRT4
ANKHD1-EIF4EBP3
ANKHD1
ASS1
SH3YL1
ACP1
TKTL2
FECH
ADCY9
NPIPB6
SLC25A41
KHSRP
OPN4
CNOT3
DNMBP
CPN2
SART3
ISCU
ETV4
KLF10
MICAL3
CPNE6
CARMIL3
USP17L17
USP17L15
UNC5B
S100P
RBBP5
LSMEM2
B2M
USP17L11
PRSS23
PEX10
BATF
PAX4
PKIB
MYBPH
HASPIN
CYB561
LENG1
ADD3
KIF2C
ENHO
LCMT1
GPR153
COL26A1
ANAPC7
NUP85
GJD3
BTNL9
ZNF229
TTC21B
ZNHIT2
TM7SF2
H2BC5
H1-4
INAVA
LHX4
ESRP2
SLC16A3
JUNB
MIEF1
SASH3
USP17L18
KLRC3
EXOSC5
BCKDHA
A4GALT
SRSF7
H4C9
TCF21
CACNA1H
HID1
ARPIN-AP3S2
ARPIN
MAB21L4
TRAF7
RPS29
RAB26
GPD1L
MOCS1
MEIS1
LAMB2
CSK
ANGEL1
TBC1D16
GAGE2A
SH3BGR
LCA5L
DLL3
SLC19A1
ACBD6
GTF2B
AZGP1
ENKUR
DYSF
ZBTB5
HOXC6
HOXC5
CD22
H4C12
H4C11
SMAD3
UBE2I
TGIF1
KCNK7
C19orf48
ATP5MG
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
NCOA3
RAB5B
PMEL
HRK
CDK2
UFM1
TRIM2
SPINK13
IMPA2
CACNB2
MACROD1
USP17L10
PRSS8
PNO1
SF3B3
COG4
FBN1
ZNF91
AHCYL1
IRF2BPL
UBE2L3
MYH11
HSH2D
GAA
PHF13
KLHL21
ZBTB42
AKT1
BMP4
ZNF576
IRGQ
GOSR2
TOMM40
PSMD12
TTC28
MRPS7
MIF4GD
GGA3
UPK3A
SH2D3C
DDIT4
DCLK1
ZFP37
H4C3
H1-6
ZNF654
CGGBP1
TSN
PCNX3
MAP3K11
SBSPON
SLC11A2
ITGB3
RAD23A
H2BC14
H2AC14
CALR
SEMA4G
SCIN
H2BC15
H2AC15
C1orf198
PCTP
NVL
NNAT
CASZ1
BLCAP
ZNF335
ZRANB2
GHRH
EEF1A1
PPP2R3A
IVD
SULT1A1
EIF3E
RXRA
RPS27
RAB13
KCTD1
ID1
SP1