ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9932073 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◢ SRX017710: CD4+ T cells

◢ SRX5090184: GM12878

◢ SRX10475642: Hep G2

◢ SRX10475643: Hep G2

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◢ SRX9932062: MCF-7

◢ SRX9932063: MCF-7

◢ SRX9932064: MCF-7

◢ SRX9932065: MCF-7

◢ SRX9932066: MCF-7

◢ SRX9932067: MCF-7

◢ SRX9932068: MCF-7

◢ SRX9932069: MCF-7

◢ SRX9932070: MCF-7

◢ SRX9932071: MCF-7

◢ SRX9932072: MCF-7

◣ SRX9932073: MCF-7

◢ SRX9932074: MCF-7

◢ SRX9932075: MCF-7

◢ SRX9932076: MCF-7

◢ SRX9932077: MCF-7

◢ SRX23330419: MDA-MB-231

◢ SRX23330420: MDA-MB-231

◢ SRX23330421: MDA-MB-231

◢ SRX23330422: MDA-MB-231

◢ SRX23330424: MDA-MB-231

◢ SRX23330425: MDA-MB-231

◢ HDAC6: STRING

IGFBP4
TMEM104
NAT9
GREB1
TFF1
IER3
FLOT1
RARA
IL24
TSKU
PDZK1
TMIGD3
ADORA3
DCAKD
FKBP4
CASP7
STARD10
CDC42EP1
LGALS2
PRLH
SLC25A25
NAIF1
VASN
HSPB8
MYOG
FAM174B
DGKZ
OSGIN1
ADAMTSL5
RAPGEFL1
PPP2R2C
SBNO2
YIF1B
KCNK6
FILIP1L
RPS6KL1
LMAN1L
CPLX3
SPINK4
RNF223
FREM2
NBPF4
ARPC1B
NBPF6
MLPH
SLC22A5
SYT12
N4BP3
GSG1L
PARD6B
SCOC
NFKBIA
TH
INS-IGF2
INS
ST8SIA6
OTUD7B
TTC39A
FOXK1
SNX24
AMBP
MSLN
ATP8B1
ATP6AP1
DNASE1L1
BACE1
RET
TPD52L1
UBE2T
MAP3K14
OVOL2
CANT1
C1QTNF1
CYP1B1
FAM102A
HAAO
TIPARP
SFXN2
ARL3
TMEM229B
AMZ1
AKAP1
CCDC88C
FASN
SGK3
CXXC5
C19orf33
CHPT1
MAMDC4
EDF1
NEMP1
NAB2
CDH1
NHSL1
SRRM2
PDGFA
ITPK1
CTBP1
ARMCX6
ARMCX3
PADI4
CELSR2
LY6E
FRG2C
DUX4
HAPLN2
NBPF1
MANEAL
CAP2
SLC9A3R1
RAB40C
MCF2L
GPRIN1
C1QTNF6
SLC7A5
MIDEAS
CTAG2
SLC25A24
KRT37
USP31
KDM4B
LRRFIP2
NAV2
OLFML3
APOC3
APOA1
PAK4
PTPA
CRAT
STK11
MSMB
KEAP1
PPARGC1A
MYB
CST6
ZNF185
KRT8
LRRC56
HRAS
PLEKHH1
SEPTIN9
UNKL
SLC25A45
FRMD8
B3GNT6
YBEY
MCM3AP
HEG1
ALX4
MYEOV
AFF1
HAUS1
ATP5F1A
GRM4
LYPD6B
ALDH3B1
PGLYRP2
PLIN5
LRG1
LOC102724770
DGCR6
ADAM8
RECQL4
MFSD3
LRRC14
RHOD
KLF16
CUEDC1
KIF21A
CSAD
IL19
RPS28
NDUFA7
ACOT6
UPF1
CCN5
KRT85
UHRF1
PDE4DIP
CABLES2
TJAP1
DOK7
ADGRG1
INSYN1
SMTNL2
CRKL
XAB2
SEC14L6
LAMC1
TIFA
KIAA0319
SLC25A1
IPPK
PKP3
SLC9A3R2
KRT19
CHSY1
SLC25A36
ESR1
CTSD
SPTBN4
BLVRB
ZFP36
PLEKHG2
B4GALT1
FBP1
CDK3
MIOS
WWC1
CLIC3
ELF1
CERS2
ANXA9
TPD52L2
ABHD16B
CA12
NFE2L1
PLCD3
ACBD4
ZBTB37
EPS15L1
ACIN1
FCGR2B
TMEM92
SGCA
CLASP2
GPR37L1
CELA2B
SLC25A42
PSD4
SNAI1
CBWD5
CBWD3
CBWD6
ELAPOR1
C1orf194
CASTOR1
SERPINF1
TBX2
VPS26C
MAPT
DMRT2
ABAT
ACSS1
RGL3
MICOS10-NBL1
MICOS10
ARHGEF10L
LRP5L
ASB2
PRR5-ARHGAP8
PRR5
ABCD4
VWA2
PLXNB1
CELA2A
RGS10
ART1
TTC6
FOXA1
FMN1
ARHGEF18
MRFAP1
FOXK2
LATS1
MRGPRG
CCR6
CCDC198
COPS8
FRG2
KAZN
MACC1
ATP13A3
TCIRG1
NDUFS8
ISYNA1
FGR
GPC6
MGAT3
SLC25A19
GRIK3
CDH26
TBX1
MFSD10
NIPSNAP2
EDN1
SYT8
SULT2B1
GZMM
CDC34
ALG8
EBF4
C20orf203
SPOP
PDE4C
ORAI2
SLC26A1
IDUA
UQCC2
CALCR
MAD1L1
C16orf74
IL2RB
TST
MPST
UMODL1
ANKRD2
FST
DSN1
SIAH2
LONP2
ABCC11
SURF4
CSF3
TFAP2C
PRDX1
AKNA
TMCC1
ZBTB45
SLC27A5
BDKRB1
HDAC11
ZBTB46
TRH
SYNPO2L
ARHGEF16
SYNE3
FUT4
PNKD
FABP3
SPATS2L
SCARB1
RERG
SYNJ2
PRUNE1
MINDY1
TUBA3E
USF2
TSEN54
CASKIN2
DNPEP
CHST8
TTC9B
CCNP
FOXO6
ARID5B
EFHD2
FAM228B
TP53I3
SF3B6
SUSD3
B3GALNT1
MAPKAPK3
CISH
ETNK2
PERP
SVIL
MAPK13
RABGEF1
ZNF79
PRSS27
DOT1L
MYLK2
P2RY2
CDR2L
WDR90
MCRIP2
METTL26
SDC4
RCOR3
NEFH
ZNF346
TNNI2
MTA1
PDLIM2
CCDC200
RNPEPL1
DUSP28
ANKMY1
KAT6B
ATP6AP2
NMNAT1
LZIC
NT5DC3
SERPINA1
SERPINA6
ZNF710
CBFA2T3
ZBTB7A
BMP7
PPP1R12B
MANBAL
AGPS
ARAP3
GPSM1
FBXW8
KCNIP2
ST3GAL4
SLC25A47
SLC35E2A
CTR9
FAM214A
ZNF285
NPIPB9
ZFYVE28
CFAP99
ZBTB7B
ROBO3
DHRS3
TUBA3D
JUP
IVD
LFNG
PXDC1
ARL4D
DNMT3A
UGT2B15
DEF6
FIGNL2
SPTB
NPEPPS
SLC35E1
SLC37A1
SLC43A2
TBC1D14
VEPH1
CAPN12
TNS1
SHC2
DECR1
REM2
NR2F6
CD22
TBKBP1
FOXN1
C1orf162
EHF
TAX1BP1
LTBP1
CCDC9B
SLC1A5
SIDT2
LAMB2
FECH
MTRNR2L1
COMTD1
PTH1R
FAM187A
GFAP
DDX10
DLG4
ACADVL
CYP4F11
AP1B1
FUT7
C9orf139
ABCA2
RTEL1
STMN3
OXT
CLCN4
SH2D3C
EREG
VCAN
HSPB1
PTGES
PLEC
GOLM1
NCAPH
ITPRIPL1
NDRG1
PI4KB
SIN3B
DHX37
BRI3BP
DNAJC5B
NPIPB6
NTMT1
C9orf50
TMEM210
LRRC26
TTC39C
ZNRF2
HKDC1
PPL
CAND1
SPRY4
SLC45A4
SEMA3B
SVEP1
NR2F2
OBSL1
INHA
ITGB2
NDRG4
ATXN1
PCTP
ZMYND11
DMPK
EPB41L1
AMOTL2
COLEC12
SH3GLB2
MIGA2
MYZAP
GCOM1
SULT1A4
SULT1A3
SLC37A3
RAB19
TMEM95
KCTD11
B3GNT3
UBALD1
MGRN1
TDRD9
ATP5MPL
KLK14
IKBKG
G6PD
CGN
PGGHG
NLRP6
TNK2
ZBTB5
SCGB3A1
GDF15
RTN1
ASS1
ZNF746
TTLL6
RNF144A
SLC29A1
MYMX
BCL3
APTX
DNAJA1
HK1
PDCD6IP
OPN4
TUBA1A
NT5C2
CHD9
PTPRH
TSSC4
TJP3
RCAN1
JARID2
SCAMP4
ADAT3
ATG9B
ABCB8
CYP4F2
SNX10
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
STC2
SDC1
RAI14
TWF2
PPM1M
ATP4A
TMEM147
PRSS8
MUC3A
HSPA4
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
CPNE6
CARMIL3
LENG1
NXNL2
ABR
EIF5AL1
ITGB5
RASEF
MAGI3
OGG1
LRRC58
CYP1A1
TRIM47
RMND5B
BOD1L2
VWA1
TMEM88B
MTUS1
TMED8
SAMD15
LPCAT1
MIDN
CALML5
PLCB1
ERN1
YPEL2
COX7A2L
TANGO2
ARVCF
RORC
C2CD4D
GRAMD1A
ELFN2
ABHD2
CFAP206
PTPRR
ZCWPW1
PPP1R35
MEPCE
PABPC1
TXNRD1
RNF170
HOOK3
EXT2
TBXA2R
PADI3
ABCD3
CYB561
SLC16A3
EMP2
WNT16
LASP1
PMEPA1
P2RX2
AGR3
FNIP2
IL1F10
KLHL14
OAZ3
MRPS23
TRIM16L
GLRX5
COL18A1
PDF
AHCYL1
SLC6A6
MEF2A
SHCBP1
TCTA
RHOA
RPL7L1
AMT
TFAP2A
AHCY
TPTEP2-CSNK1E
TRPM7
LARGE1
CCR7
ESRP2
SHANK2
FSIP1
EPPK1
ATG16L2
CLPSL2
CLPSL1
BHLHE40
KLK12
NAIP
SETD2
IMPA2
SEMA4G
PLEKHG5
RETREG1
CIB2
CSK
LCN8
LCN15
USP17L21
USP17L20
USP17L12
USP17L22
TBC1D16
UBL4A
SLC10A3
GAA
HASPIN
LOC100130520
CD300H
C17orf77
HID1
ASPG
XBP1
ZC2HC1C
ACYP1
GINS3
S100P
PEX10
GPR153
UBE2H
EOLA1
HSFX3
FAM234B
MFSD6
MAB21L4
TTC28
HSH2D
MACROH2A1
SH3YL1
ACP1
COL26A1
RPS6KA2
RIPPLY1
CLDN2
DLC1
KLRC3
RGS3
REEP5
MOCS1
NBPF12
TUBA8
ACACB
ACOX3
GPRC5A
HSFX4
EOLA2
KRT13
GUCA2A
ANKH
NCOA3
FRMD5
PATJ
ADCY5
SLC35F6
RALGPS2
SEMA3F
MN1
POU2F3
TNS3
JUNB
HOOK2
COX5A
PPCDC
SPATC1L
WDR74
STX5
MTRNR2L2
MSH3
DHFR
MAMDC2
MTRNR2L8
NFIB
KIF5C
COL23A1
SP2
PTPRN2
TLE1
PMF1-BGLAP
PMF1
MUC1
EAPP
NRP1
LIMS1
LOC102723996
ICOSLG
MAT1A
ADARB1
RGPD2
RGPD1
MTRNR2L9
NXT1
SPAAR
HRCT1
CCNL1
PHRF1
LONRF2
GZF1
MTRNR2L10
ELOVL2
EMILIN2
POLR3F
DZANK1
CPA6
ADORA1
EPN1
DNM2
PCYT1A
IER5L
TMEM212
TMEM242
IL20
UNC45B
NLE1
LEMD2
LIMS4
KLK13
TRIM48
RFX1
TAF12
NLK
DHRS2
HNRNPL
FGFBP2
FAM3B
TSPEAR
KRTAP10-12
BAMBI
RGS12
JPH2
OSBP
CRYAA2
CRYAA
C3
CDC42EP3
CDH18
MARCHF10
P2RX4
RHOBTB1
DDX47
EVI5L
MTRNR2L6
FAM184A
IMMP2L
PLEKHF1
DNAJA4
NBPF15
HSP90AB1
CALHM4
ME3
APOA4
FADD
TOM1L2
DRC3
HOMER2
EHD1
ANXA2
PRSS22
RPL13
ARFGEF2
KLRF2
CIC
GATAD2A
TP63
RBM43
SSTR2
ZNF687
H4C14
H3C15
H3C14
ZNF552
PARP16
MAPKAPK5
PPP2R5E
PABPN1
KCNH7
PRDM4
ASCL4
POLDIP3
H4C15
TRMT10B
LGR6
SHCBP1L
ZNF385B
FARSB
CST9
RABL6
CCDC183
USP17L13
RGS19
OPRL1
LKAAEAR1
TSPAN5
PCIF1
FBH1
ANKRD16
PAX9
TPBG
ZSWIM6
CRK
BAIAP3
CDH11
PTP4A2
NPIPA3
NPIPA2
ARHGAP29
PTMA
TEX36
ENTPD8
PALLD
PLA2G10
PAQR5
PGF
H2AC19
H2AC18
HUWE1
ABCA3
TMEM107
FUS
FYB2
SPATA9
RHOBTB3
ZNFX1
AFAP1
MERTK
ZMYND8
SLC2A12
ATF4
RAB31
RPEL1
SIRT4
ANKHD1-EIF4EBP3
ANKHD1
TKTL2
ADCY9
SLC25A41
KHSRP
CNOT3
DNMBP
CPN2
SART3
ISCU
ETV4
KLF10
MICAL3
USP17L17
USP17L15
UNC5B
RBBP5
LSMEM2
B2M
USP17L11
PRSS23
BATF
PAX4
PKIB
MYBPH
ADD3
KIF2C
ENHO
LCMT1
ANAPC7
NUP85
GJD3
BTNL9
ZNF229
TTC21B
ZNHIT2
TM7SF2
H2BC5
H1-4
INAVA
LHX4
MIEF1
SASH3
USP17L18
EXOSC5
BCKDHA
A4GALT
SRSF7
H4C9
TCF21
CACNA1H
ARPIN-AP3S2
ARPIN
TRAF7
RPS29
RAB26
GPD1L
MEIS1
ANGEL1
GAGE2A
SH3BGR
LCA5L
DLL3
SLC19A1
ACBD6
GTF2B
AZGP1
ENKUR
DYSF
HOXC6
HOXC5
H4C12
H4C11
SMAD3
UBE2I
TGIF1
KCNK7
C19orf48
ATP5MG
RAB5B
PMEL
HRK
CDK2
UFM1
TRIM2
SPINK13
CACNB2
MACROD1
USP17L10
PNO1
SF3B3
COG4
FBN1