ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX017710 | CD4+ T cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◣ SRX017710: CD4+ T cells

◢ SRX5090184: GM12878

◢ SRX10475642: Hep G2

◢ SRX10475643: Hep G2

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◢ SRX9932062: MCF-7

◢ SRX9932063: MCF-7

◢ SRX9932064: MCF-7

◢ SRX9932065: MCF-7

◢ SRX9932066: MCF-7

◢ SRX9932067: MCF-7

◢ SRX9932068: MCF-7

◢ SRX9932069: MCF-7

◢ SRX9932070: MCF-7

◢ SRX9932071: MCF-7

◢ SRX9932072: MCF-7

◢ SRX9932073: MCF-7

◢ SRX9932074: MCF-7

◢ SRX9932075: MCF-7

◢ SRX9932076: MCF-7

◢ SRX9932077: MCF-7

◢ HDAC6: STRING

ZNFX1
EAPP
EEF1A1
EIF3E
KRT36
KRT35
WDR74
STX5
H4C14
H3C15
H3C14
H4C15
H2AC19
H2AC18
GTF2B
B2M
TAF12
RUNDC3B
POLDIP3
FUS
TRAF7
RAB26
PRDX1
UNC45B
NLE1
SRSF7
TMEM107
H4C9
H2BC11
H2AC11
H2BC21
H2AC21
H2AC20
TSPOAP1
NME1
DDB2
USP53
RCC1
RPS29
POLG2
DDX5
CEP95
TMEM238
TMEM190
RPL28
MAGOH
PLEC
RNF213
SRSF2
MFSD11
TUBB4B
STPG3
FAM166A
PMF1-BGLAP
PMF1
PARP16
SCGB1C2
SCGB1C1
NAT10
RPS27
RAB13
PMAIP1
RPS20
RANBP2
ANGEL1
LY9
CWF19L1
RPLP1
PTPN6
C12orf57
TFPT
PRPF31
SSNA1
ANAPC2
PHB2
RPL27
IFI35
BTG1
ZC3H10
RPL41
ESYT1
PFKFB3
TPM3
CSRNP1
MTRNR2L1
RNF149
SYTL3
SNX5
MGME1
DYNLT1
HMBS
H2AX
DPAGT1
CLEC2D
RPL10
ALOX5AP
RASA3
IFRD1
MRPL44
H4C3
H1-6
RALGDS
MFSD4B
RPL29
ACOX3
ZBTB37
DEF6
H2BC5
H1-4
IL1R1
RPTOR
SIRT4
NDUFS7
CD226
SH2D2A
NTRK1
CALM2
SLC43A3
PREX1
HNRNPA1
CBX5
GIPR
DENR
THBS4
MTX3
WEE1
TRMT61B
TAS2R43
IRF1
HSP90AB1
ZBTB40
IRF9
JUN
EIF4G2
FOXO1
PSMD9
HPD
CAMLG
ARF6
CLK1
MAP3K14
IQGAP2
FAM167A
ASB2
NOLC1
MRPS23
SOCS3
UBC
TNF
LTA
HERPUD1
KMT2E
CWC25
C1orf198
VPS72
PIP5K1A
ARHGAP25
ZBTB4
SLC35G6
POLR2A
RAB7A
PIEZO1
ZZEF1
CYB5D2
H3C6
H2BC8
H2AC8
TMPRSS6
NUFIP1
GPALPP1
BCL2A1
GADD45B
TPD52
REV3L
SLC7A5
AMZ2
TNFSF14
TMEM39A
POGLUT1
CDC42
ARSG
NPR2
NOP58
RANGAP1
MTF2
NUP62
IL4I1
ATF5
H4C12
H4C11
H2BC15
H2AC15
BCAR3
HAX1
RPLP2
PNPLA2
PIDD1
NOC4L
DDX51
PRKCB
NPAS4
LTB
IL17RA
ENO1
YARS1
S100PBP
GPR84
GALK2
COPS2
ATP5MC3
POFUT1
PLAGL2
TUT1
MTA2
EHD1
PDE4A
TLCD1
SRGN
RPL23A
RAB34
PROCA1
NEK8
IL21R
DDX19A
CDC37
POLR3E
TBL1XR1
SNAPC1
SSBP1
RPS13
LTN1
ID1
NEMP2
HPS5
GTF2H1
BAK1
EEF2
SECISBP2
RSL1D1
RAC2
NR1H3
FASLG
CKS2
ACP2
TMEM262
CCDC91
CAMK1
APTX
SDCBP2
RPL10A
ITPR1
DNAJA3
CSNK1D
CORO7-PAM16
CORO7
DDIT4
PPP4R3A
CENPM
ATF3
DUX4
UNKL
C16orf91
LUC7L2
FMC1-LUC7L2
FMC1
TSPAN17
MAPK1
ZNF526
MRPS14
ISG15
CARS1
AGRN
H2BC14
H2AC14
SIRT6
PTBP1
ID2
ANKRD24
XPC
TMEM230
PCNA
MRPL24
LSM3
HDGF
H2AZ2
CDS2
BID
APBB2
ZNF79
BRD2
YTHDC1
STK40
RUNX1
RNF122
DENND1B
SLC1A5
HNRNPH1
RPS6
THEMIS
GNG3
BSCL2
SEPTIN9
ILF3
CCNL1
TLE3
CD5
KIF5C
PPP1R10
MRPS18B
PRMT5
MAP3K7CL
KLF2
DDX21
CCT8
ATAT1
LOC102724770
DGCR6
H4C4
H3C4
H2BC6
FBXL22
DCP1A
CBX6
RAD23A
CALR
TANK
MAK16
LSM5
AVL9
RPLP0
GCN1
EIF1
SRSF5
TESK2
STX10
SAR1B
RMND1
MMACHC
IER2
ARMT1
EIF4A1
CD68
SLC25A11
RNF167
PFN1
MAP4K1
KCNAB2
ITGAL
GFM2
ENO3
EIF3K
TXNRD1
WBP1
SLFN13
SEPTIN7
MRPS25
INO80B
GPI
COX5B
RRM1
OXSM
NGLY1
CDV3
BTF3
ARID5B
H2BC12
H2AC12
SPAG7
IFI16
SLC3A2
STOML2
STAT1
SRSF1
PIGO
MYL6B
MYL6
GPR25
FAM214B
MAMDC2
EGR1
ZNF106
TMCC3
SNAP23
OCIAD1
NDUFB5
MYO1G
MRPL47
MBD1
CXXC1
KIF2C
MYO9B
MKLN1
JAML
HAUS8
ASXL2
PGAM1
NANOS3
METTL16
CSTF1
AURKA
TRAF2
RPL12
OASL
LRSAM1
GABPA
ATP5PF
SLC12A6
RTF1
NUTM1
NOP10
TSSC4
KIFBP
RAB6A
ITK
FAM71B
EIF3J
CAPN15
UBE2I
SKP1
NUP214
DNAJB4
THADA
SCAF11
LY96
LAX1
HNRNPA3
GNG14
FCGR3A
FBXW9
CHPF2
ABCF2-H2BE1
ABCF2
HMGN4
ZNF267
RBM3
PPP1R15A
PLEKHA4
NR4A3
MMADHC
DPP9
BANP
ANAPC10
ABCE1
TPD52L2
TNFRSF9
TMEM79
SMG5
SFPQ
RPS15
RHEBL1
RGPD8
RGPD5
RBM17
PPIL4
KMT2D
LRRFIP2
TREX1
TOX2
SHISA5
RPL9
RPL15
NKIRAS1
MGST2
LONP1
LIAS
CATSPERD
AQP2
H2BC4
H2AC6
PAFAH2
NAA16
MTRF1
MRPL30
MITD1
LMNA
FAM241A
CCNT1
C2orf42
FADD
MAPKAPK5
PSMB3
PCGF2
MRRF
PHRF1
IER5
WWP2
TSPYL2
RUNX3
NOB1
NABP1
MBOAT4
DNAJC16
CASP9
AIM2
FAM102A
RPS4X
ZNF704
VTA1
TMEM101
SUPT5H
RPS16
NUP54
NMBR
MAP1LC3B
LPIN1
KRR1
IL2RA
FBXO31
DDI2
H4C2
H4C1
H3C1
H1-1
ZNF101
TMEM167B
PRKCA
METTL3
ATP13A1
ZNF132
RHBDD1
GIT1
DNAJB12
CHD8
ASB8
ZNF207
TRAPPC10
SERP1
RFFL
HNRNPAB
EIF2A
ECH1
C17orf75
IER3
FLOT1
TBL3
RPS2
RNF151
NDUFB10
SNX1
SNRPE
RBMX
GTF2IRD1
FBXO32
CIAO2A
CD69
ADORA2A
MRFAP1
GPN2
EFNA4
DIP2B
PIP4P1
SAMD4B
PNP
GMFG
EHD4
VASP
RTN2
PPM1N
ZBTB21
SH2D1A
RPL22L1
RGL4
MANSC1
CLN3
CELF1
CCAR2
CASP8
C8orf58
BORCS5
APOBR
LOC102723996
ICOSLG
NDRG1
HSP90AA1
ZC3H3
WDPCP
STT3A
RIPOR2
PTAFR
MSL2
MED1
MDH1
LHX9
GSDMD
CDK12
C1orf53
SEMA3B
LSMEM2
ZNF764
ROM1
PWP2
MTHFD2
MORC3
LOC102724159
EML3
C8orf37
C10orf105
B3GAT3
C19orf48
NFKBIL1
DDX39B
ATP6V1G2
SMIM12
SERBP1
SACS
RPL14
PFKP
NASP
MRPL55
ITPRIP
IL23R
DCTPP1
CRADD
ATP5MC2
SART3
ISCU
TRMT2A
SH3BGRL3
RSL24D1
RANBP1
NECAP1
MBD6
DDIT3
HEXIM1
TMEM259
CNN2
WDR4
SIT1
HSD17B12
CCDC107
ATG5
ARHGEF39
DLG4
TNK2
TTYH2
RPL38
TRAFD1
TMEM109
QTRT2
PRPF19
EPRS1
CCDC191
C16orf89
APOBEC3A_B
APOBEC3A
ALG1
TCTA
RHOA
SF3A3
PPP1R8
POLA2
CITED2
BTRC
ZNF3
UBE2Z
TXN2
RETSAT
PKNOX1
LYST
ELMOD3
COPS6
CCR7
UNK
H3-3B
SPHK2
SPATA5L1
RPL18
RFTN1
NRIP3
NFYC
MZF1
METTL1
MED18
LARS2
H3C13
H2BC18
GATM
FAM83E
EEF1AKMT3
CYP27B1
TTC26
THOC1
SLC34A3
RPL7
RNF224
RNF208
RDH10
NUFIP2
MSL1
CYSRT1
CD209
CAMSAP1
ALG10B
NDUFAF3
IMPDH2
DALRD3
RBPJ
KSR1
IKZF3
DSTYK
FAM174C
CIRBP
RPS12
ZNF668
ZNF646
SHF
NOCT
CD96
RPS11
RPL13A
ZBED6CL
XRRA1
SPRYD4
SPCS2
RAB11A
POU2AF1
POLR3B
LRRC61
GPR68
GOPC
CPNE5
ACTR3C
VMAC
TRA2B
TESPA1
NDUFA11
KIF15
KIAA1143
COX8A
TICAM2
PURB
DGUOK
WDR90
MCRIP2
SP2
MOK
COG3
ZNF589
USP4
SPG7
SLC2A8
SF3B1
SCAND1
PRRT2
PAGR1
MVP
MAZ
CLTC
RPL34
MLH1
GPR18
EPM2AIP1
CD55
CCDC126
METTL26
ZNF280C
WFIKKN1
TOGARAM1
POLG
NOL7
MYO18A
MORF4L1
KLHL28
CCDC174
ZNF688
TMIGD1
PRR14
NDUFS6
MRPL36
MCCC1
LRP8
KANSL2
FBRS
JUNB
YPEL4
USPL1
RBM25
PRRC2C
NOP16
MORN3
HMGB1
HIGD2A
GTF2H3
EIF2B1
CLP1
MAP2K7
NXF1
TM9SF1
PPM1K
PEX12
IPO4
DPP4
AP2B1
MRPS7
MIF4GD
GGA3
LBH
NXPH3
RRNAD1
ISG20L2
ELK4
DNAJB2
DMXL1
BCL9
TMEM70
TATDN2
TAP1
SNX9
RPL5
RPF2
PSMB9
PSMB8
NME4
IL10RA
ELOC
EGLN2
DECR2
MRPL45
XPOT
TBRG4
RACK1
ENOSF1
RTP5
PDCD1
TRAF5
RPS3A
PLD6
NDUFB6
N6AMT1
MFSD8
GPR183
EID2B
EID2
CD53
AMN1
ABHD18
SPTBN4
BLVRB
HIBADH
TOMM20
TAF1D
SLMAP
PPAN-P2RY11
PPAN
P2RY11
C11orf54
ANGPTL6
STX11
TRMT112
PRDX5
PNPLA8
NPM1
NLRP3
ERLIN1
EMP1
EIF3D
ECSCR
ABCD3
TUBA1C
TTPAL
TMF1
TCF7
SLA
RAB11FIP1
IFNAR2
CREM
PPME1
NFU1
HNRNPC
HM13
G3BP1
FAF1
CLK4
CDKN2C
C2CD3
ZBTB11
SLC25A23
RPL24
OTUD6B
NACA
FAM227B
DTWD1
CSNK1A1
CRB3
AHNAK
LARP1
LEFTY1
WRAP53
TRIM7
TP53
MIS18A
IPO7
EIF4B
DYNC2I1
CD247
CCND3
RBM7
PSMD3
PBRM1
OSM
LSM14A
HDAC4
GNL3
C11orf71
LDHA
SUPT4H1
MKRN2OS
MKRN2
HINT3
GATB
SF3B5
SELENOI
NSRP1
KHDRBS1
FAM71D
ADGRF3
ABCA5
FARSB
GPR137
ZNF513
TRAPPC4
SNX17
RPS25
MARS1
LINS1
EIF2B4
ASB7
ARHGAP9
MAT2A
WDR76
TOMM5
NUP205
MFAP1
KTI12
ARF4
ZNF248
TXNDC9
TIMM17A
SENP7
SEC14L1
PRDM1
NUP42
LMOD1
KXD1
INSIG1
EIF5B
CDK13
TRMT10C
TOMM40
POLD1
NR1H2
MIDEAS
BCL3
FGFBP3
UTP25
RNF39
PPP1R11
POLR1H
NDUFAF5
HILPDA
ETFBKMT
ESF1
ACTR1B
BFSP1
PDF
NIP7
IARS1
ESCO1
DUSP11
DSTN
COG8
C2orf78
RAB18
WDR19
SPDYE6
LOC100289561
PSMB10
LCAT
CTRL
TMEM186
PMM2
HBS1L
ADARB1
VCPKMT
STX4
MLLT6
LYL1
GUF1
MFSD14A
GNG8
ARIH2
PRR22
PREPL
OAZ1
MRPS15
DUS3L
CAMKMT
AP4E1
ZNHIT1
ZNF33A