ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9932071 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◢ SRX017710: CD4+ T cells

◢ SRX5090184: GM12878

◢ SRX10475642: Hep G2

◢ SRX10475643: Hep G2

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◢ SRX9932062: MCF-7

◢ SRX9932063: MCF-7

◢ SRX9932064: MCF-7

◢ SRX9932065: MCF-7

◢ SRX9932066: MCF-7

◢ SRX9932067: MCF-7

◢ SRX9932068: MCF-7

◢ SRX9932069: MCF-7

◢ SRX9932070: MCF-7

◣ SRX9932071: MCF-7

◢ SRX9932072: MCF-7

◢ SRX9932073: MCF-7

◢ SRX9932074: MCF-7

◢ SRX9932075: MCF-7

◢ SRX9932076: MCF-7

◢ SRX9932077: MCF-7

◢ SRX23330419: MDA-MB-231

◢ SRX23330420: MDA-MB-231

◢ SRX23330421: MDA-MB-231

◢ SRX23330422: MDA-MB-231

◢ SRX23330424: MDA-MB-231

◢ SRX23330425: MDA-MB-231

◢ HDAC6: STRING

IGFBP4
GREB1
TMEM104
NAT9
CASP7
TFF1
IER3
FLOT1
IL24
TMIGD3
ADORA3
PDZK1
RARA
TSKU
FKBP4
DCAKD
CDC42EP1
LGALS2
FAM174B
STARD10
SBNO2
SLC25A25
NAIF1
HSPB8
NBPF4
MYOG
VASN
NBPF6
PRLH
ADAMTSL5
PARD6B
OSGIN1
PPP2R2C
N4BP3
YIF1B
KCNK6
ARPC1B
FILIP1L
FREM2
LMAN1L
CPLX3
RPS6KL1
TH
INS-IGF2
INS
MLPH
FOXK1
RAPGEFL1
RNF223
SPINK4
SLC22A5
DGKZ
SCOC
GSG1L
ST8SIA6
SNX24
ATP8B1
SYT12
HAAO
TTC39A
CHPT1
CANT1
C1QTNF1
OTUD7B
BACE1
AMBP
ATP6AP1
DNASE1L1
AKAP1
CYP1B1
UBE2T
CCDC88C
RET
NFKBIA
TPD52L1
CTBP1
MAMDC4
EDF1
OVOL2
C19orf33
SGK3
MSLN
CELSR2
MAP3K14
NEMP1
NAB2
FASN
CDH1
FAM102A
LY6E
PDGFA
MCF2L
SFXN2
ARL3
DUX4
SLC25A24
MANEAL
KRT37
ARMCX6
ARMCX3
TMEM229B
TIPARP
AMZ1
PADI4
CABLES2
NAV2
USP31
CST6
SRRM2
GPRIN1
PPARGC1A
ALDH3B1
YBEY
MCM3AP
NBPF1
OLFML3
KDM4B
C1QTNF6
B3GNT6
ZNF185
SLC9A3R1
ALX4
APOC3
APOA1
ITPK1
LRRFIP2
CXXC5
UPF1
CAP2
MYB
IL19
FRG2C
PKP3
SLC7A5
LRRC56
HRAS
MIDEAS
NHSL1
CTAG2
CLIC3
PTPA
CRAT
RECQL4
MFSD3
LRRC14
RAB40C
HAPLN2
PLEKHH1
LAMC1
SPTBN4
BLVRB
KEAP1
UNKL
DOK7
PDE4DIP
KIAA0319
LOC102724770
DGCR6
CELA2A
ESR1
HAUS1
ATP5F1A
ACOT6
SMTNL2
SEC14L6
CTSD
HEG1
SLC25A45
FRMD8
VPS26C
SLC9A3R2
MYEOV
MSMB
CRKL
AFF1
KRT8
PAK4
SLC25A42
KRT85
PLIN5
LRG1
MAPT
INSYN1
PRUNE1
MINDY1
KLF16
LYPD6B
ELF1
CSAD
ZBTB37
PGLYRP2
RPS28
NDUFA7
ADAM8
STK11
IPPK
ACSS1
B4GALT1
TCIRG1
NDUFS8
SLC25A1
SEPTIN9
GRM4
WWC1
RGS10
ADGRG1
ZBTB46
ZFP36
PLEKHG2
CERS2
ANXA9
UHRF1
CDK3
SERPINF1
PRR5-ARHGAP8
PRR5
ALG8
ACIN1
FST
SGCA
GPR37L1
CALCR
KIF21A
TJAP1
SYT8
TIFA
CHSY1
FRG2
CUEDC1
EBF4
ABCD4
RABGEF1
CBWD5
CBWD3
CBWD6
TPD52L2
ABHD16B
KAZN
ZBTB45
SLC27A5
XAB2
CELA2B
GPC6
UMODL1
VWA2
DMRT2
FMN1
SLC25A36
FCGR2B
FBP1
LTBP1
TBX2
RGL3
COPS8
MFSD10
ISYNA1
MIOS
RHOD
CCN5
PLCD3
ACBD4
CA12
PSD4
AKNA
FUT4
TFAP2C
SYNPO2L
NFE2L1
ELAPOR1
C1orf194
PNKD
MAD1L1
CDH26
SNAI1
SPATS2L
GPSM1
EPS15L1
MRFAP1
TMEM92
CCDC198
MRGPRG
FAM228B
TP53I3
SF3B6
CBFA2T3
PDE4C
MICOS10-NBL1
MICOS10
SPOP
CLASP2
FBXW8
ARHGEF16
FOXK2
CAPN12
ARHGEF10L
IL2RB
ABAT
ZFYVE28
CFAP99
GRIK3
KCNIP2
MAPKAPK3
CISH
KRT19
SULT2B1
LONP2
ABCC11
SURF4
LRP5L
MACC1
SLC25A19
C16orf74
TUBA3E
DSN1
ARHGEF18
RERG
C1orf162
GZMM
CDC34
DNMT3A
SVIL
APTX
DNAJA1
CDR2L
PRDX1
PLXNB1
DECR1
ATP13A3
SYNE3
TST
MPST
DMPK
TTC6
FOXA1
RCOR3
FGR
AGPS
OBSL1
INHA
WDR90
MCRIP2
METTL26
TBX1
CHST8
ORAI2
EFHD2
SYNJ2
SERPINA6
NIPSNAP2
ZNF346
FOXO6
PRSS27
SUSD3
ANKRD2
B3GALNT1
MYLK2
CCR6
TRH
NPEPPS
RASEF
TMCC1
VEPH1
ZNF79
MGAT3
ITGB5
ASB2
P2RY2
SIAH2
REM2
FAM187A
GFAP
ETNK2
CASTOR1
RNPEPL1
DUSP28
ANKMY1
EXT2
OXT
SLC26A1
IDUA
C20orf203
DNPEP
DHRS3
BDKRB1
EDN1
SHC2
SLC25A47
CCDC200
CSF3
TBC1D14
PLEC
FAM214A
MYZAP
GCOM1
NDRG1
SPTB
EREG
DDX10
SERPINA1
BMP7
NR2F6
HDAC11
SEMA3B
PPP1R12B
LRRC58
PXDC1
ARAP3
MUC1
MIDN
FABP3
PMEPA1
ARL4D
FIGNL2
NPIPB9
SLC35E2A
PABPC1
RNF144A
NFIB
MTRNR2L1
TUBA1A
ARID5B
GDF15
SDC1
SH2D3C
EHF
NMNAT1
LZIC
TTC39C
FUT7
C9orf139
ABCA2
RETREG1
DEF6
ATXN1
ZBTB7B
NEFH
FRMD5
DHX37
BRI3BP
UGT2B15
ATP6AP2
ZNF285
DLG4
ACADVL
ASS1
SDC4
TSEN54
CASKIN2
AP1B1
NTMT1
C9orf50
TUBA3D
UQCC2
PLCB1
DOT1L
ZNF746
MAPK13
OAZ3
YPEL2
VCAN
PI4KB
NXT1
GZF1
LATS1
ST3GAL4
SLC43A2
CIB2
UBALD1
MGRN1
VWA1
TMEM88B
S100P
COX7A2L
USF2
IMPA2
PERP
AHCYL1
SCAMP4
ADAT3
IKBKG
G6PD
TMEM210
LRRC26
LPCAT1
FECH
HID1
PPL
FGFBP2
AGR3
ABHD2
PTH1R
TAX1BP1
MANBAL
WNT16
KAT6B
SLC37A3
RAB19
ZNF710
TNNI2
TMEM95
KCTD11
ERN1
CALML5
ZMYND11
NDRG4
CTR9
CYP4F11
SLC29A1
MYMX
ZNF91
SH3GLB2
MIGA2
PHRF1
SLC35E1
RASSF7
LMNTD2
SLC6A6
TMEM120A
FOXN1
ATP4A
TMEM147
TP63
LOC100130520
CD300H
C17orf77
MTA1
IMMP2L
ZBTB5
RALGPS2
HKDC1
GAA
RTEL1
SLC1A5
STMN3
TBXA2R
RORC
C2CD4D
HSP90AB1
OPN4
RXRA
TMED8
SAMD15
CFAP206
ART1
ROBO3
EPPK1
ADCY9
JUP
MIPOL1
CLCN4
ZNHIT2
TM7SF2
PTGES
DNAJC5B
LASP1
RMND5B
UBE2I
GPR153
MFSD6
NCAPH
ITPRIPL1
TTLL6
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
ANKH
DDX47
CCDC9B
TJP3
SPATC1L
WDR74
STX5
MTRNR2L2
MSH3
DHFR
MAMDC2
COLEC12
MTRNR2L8
ACACB
KIF5C
COL23A1
KLK14
SP2
TNS1
PTPRN2
MUC3A
TLE1
TTC9B
CCNP
PMF1-BGLAP
PMF1
NT5DC3
EAPP
SVEP1
NRP1
LIMS1
TBKBP1
NXNL2
TSSC4
LOC102723996
ICOSLG
MAT1A
ADARB1
TFAP2A
SIDT2
CYP4F2
RGPD2
RGPD1
MTRNR2L9
SPAAR
HRCT1
CCNL1
SCGB3A1
MAGI3
RTN1
COMTD1
LONRF2
EPB41L1
EIF5AL1
SHANK2
MTRNR2L10
LFNG
SCARB1
ELOVL2
EMILIN2
POLR3F
GOLM1
DZANK1
CPA6
ADORA1
EPN1
USP17L21
USP17L20
USP17L12
DNM2
PCYT1A
IER5L
BOD1L2
TMEM212
NR2F2
HK1
USP17L22
GRAMD1A
PTPRR
CCR7
TMEM242
IL20
UNC45B
NLE1
LEMD2
KLK12
LIMS4
TXNRD1
HSPA4
KLK13
RPS6KA2
SPRY4
TRIM48
RFX1
ELFN2
TDRD9
ATP5MPL
TAF12
FSIP1
SLC45A4
NLK
RIPPLY1
CLDN2
DHRS2
HNRNPL
FAM3B
TSPEAR
KRTAP10-12
BAMBI
RGS12
ACOX3
RNF170
HOOK3
GINS3
JPH2
OSBP
CRYAA2
CRYAA
RCAN1
C3
CDC42EP3
CDH18
MARCHF10
P2RX4
RHOBTB1
EVI5L
MTRNR2L6
NT5C2
ADCY5
GPRC5A
ZBTB7A
ABR
FAM184A
PLEKHF1
BCL3
DNAJA4
ATG9B
ABCB8
UBL4A
SLC10A3
NBPF15
RGS3
CALHM4
ME3
DLC1
APOA4
NAIP
UBE2H
SNX10
KRT13
FADD
TOM1L2
HSPB1
DRC3
NBPF12
HOMER2
EHD1
SIN3B
ANXA2
PRSS22
RPL13
ARFGEF2
FNIP2
KLRF2
CIC
PDLIM2
GATAD2A
ITGB2
RBM43
SSTR2
CHD9
ZNF687
TWF2
PPM1M
H4C14
H3C15
H3C14
ZNF552
PARP16
MAPKAPK5
MEF2A
PPP2R5E
PABPN1
KCNH7
PRDM4
ASCL4
ASPG
POLDIP3
TPTEP2-CSNK1E
FAM234B
JARID2
H4C15
TRMT10B
LGR6
SHCBP1L
ZNF385B
FARSB
CST9
SLC37A1
TRPM7
RABL6
CCDC183
USP17L13
RGS19
OPRL1
LKAAEAR1
TSPAN5
BHLHE40
RAI14
PCIF1
FBH1
ANKRD16
PAX9
EOLA1
IL1F10
HSFX3
TPBG
ZSWIM6
CRK
BAIAP3
CDH11
PTP4A2
CAND1
ZNRF2
NPIPA3
NPIPA2
AMOTL2
ARHGAP29
PTMA
TEX36
ATG16L2
B3GNT3
SETD2
ENTPD8
PALLD
PLA2G10
PAQR5
STC2
HSFX4
EOLA2
PGF
H2AC19
H2AC18
HUWE1
ABCA3
TMEM107
PADI3
MTUS1
LARGE1
FUS
FYB2
SPATA9
RHOBTB3
TNK2
GLRX5
ZNFX1
PDCD6IP
AFAP1
MERTK
ZMYND8
SLC2A12
ATF4
RAB31
ABCD3
RPEL1
SIRT4
ANKHD1-EIF4EBP3
ANKHD1
SH3YL1
ACP1
TKTL2
NPIPB6
SLC25A41
KHSRP
CNOT3
DNMBP
CPN2
SART3
ISCU
ETV4
KLF10
MICAL3
CPNE6
CARMIL3
USP17L17
USP17L15
UNC5B
RBBP5
LSMEM2
B2M
USP17L11
PRSS23
PEX10
BATF
PAX4
PKIB
MYBPH
HASPIN
CYB561
LENG1
ADD3
KIF2C
ENHO
LCMT1
COL26A1
ANAPC7
NUP85
GJD3
BTNL9
ZNF229
TTC21B
H2BC5
H1-4
INAVA
LHX4
ESRP2
SLC16A3
JUNB
MIEF1
SASH3
USP17L18
KLRC3
EXOSC5
BCKDHA
A4GALT
SRSF7
H4C9
TCF21
CACNA1H
ARPIN-AP3S2
ARPIN
MAB21L4
TRAF7
RPS29
RAB26
GPD1L
MOCS1
MEIS1
LAMB2
CSK
ANGEL1
TBC1D16
GAGE2A
SH3BGR
LCA5L
DLL3
SLC19A1
ACBD6
GTF2B
AZGP1
ENKUR
DYSF
HOXC6
HOXC5
CD22
H4C12
H4C11
SMAD3
TGIF1
KCNK7
C19orf48
ATP5MG
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
NCOA3
RAB5B
PMEL
HRK
CDK2
UFM1
TRIM2
SPINK13
CACNB2
MACROD1
USP17L10
PRSS8
PNO1
SF3B3
COG4
FBN1
IRF2BPL
UBE2L3
MYH11
HSH2D
PHF13
KLHL21
ZBTB42
AKT1
BMP4
ZNF576
IRGQ
GOSR2
TOMM40
PSMD12
TTC28
MRPS7
MIF4GD
GGA3
UPK3A
DDIT4
DCLK1
ZFP37
H4C3
H1-6
ZNF654
CGGBP1
TSN
PCNX3
MAP3K11
SBSPON
SLC11A2
ITGB3
RAD23A
H2BC14
H2AC14
CALR
SEMA4G
SCIN
H2BC15
H2AC15
C1orf198
PCTP
NVL
NNAT
CASZ1