ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9932067 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◢ SRX017710: CD4+ T cells

◢ SRX5090184: GM12878

◢ SRX10475642: Hep G2

◢ SRX10475643: Hep G2

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◢ SRX9932062: MCF-7

◢ SRX9932063: MCF-7

◢ SRX9932064: MCF-7

◢ SRX9932065: MCF-7

◢ SRX9932066: MCF-7

◣ SRX9932067: MCF-7

◢ SRX9932068: MCF-7

◢ SRX9932069: MCF-7

◢ SRX9932070: MCF-7

◢ SRX9932071: MCF-7

◢ SRX9932072: MCF-7

◢ SRX9932073: MCF-7

◢ SRX9932074: MCF-7

◢ SRX9932075: MCF-7

◢ SRX9932076: MCF-7

◢ SRX9932077: MCF-7

◢ SRX23330419: MDA-MB-231

◢ SRX23330420: MDA-MB-231

◢ SRX23330421: MDA-MB-231

◢ SRX23330422: MDA-MB-231

◢ SRX23330424: MDA-MB-231

◢ SRX23330425: MDA-MB-231

◢ HDAC6: STRING

GREB1
IGFBP4
TFF1
TMIGD3
ADORA3
IL24
CASP7
TMEM104
NAT9
MYOG
PDZK1
TSKU
IER3
FLOT1
HSPB8
FKBP4
RARA
SLC25A25
NAIF1
OSGIN1
PARD6B
STARD10
PRLH
NBPF4
FAM174B
NBPF6
FREM2
ADAMTSL5
SBNO2
FILIP1L
PPP2R2C
SPINK4
RNF223
RPS6KL1
SLC22A5
DCAKD
YIF1B
KCNK6
VASN
OVOL2
LMAN1L
CPLX3
GSG1L
CYP1B1
CDC42EP1
LGALS2
TPD52L1
CAP2
ST8SIA6
AMBP
SGK3
DGKZ
CELSR2
SYT12
ATP6AP1
DNASE1L1
TMEM229B
SCOC
CHPT1
TTC39A
RAPGEFL1
TH
INS-IGF2
INS
YBEY
MCM3AP
SFXN2
ARL3
RET
MCF2L
N4BP3
CDH1
KRT37
UBE2T
CANT1
C1QTNF1
SLC25A24
PPARGC1A
DUX4
NAV2
IL19
MLPH
CCDC88C
HAAO
CTAG2
AMZ1
SLC9A3R1
PLEKHH1
CTBP1
FOXK1
BACE1
ACOT6
TIPARP
NBPF1
KDM4B
C19orf33
HEG1
ZNF185
NEMP1
NAB2
PADI4
ATP8B1
PTPA
CRAT
B3GNT6
SNX24
MYEOV
NHSL1
SLC7A5
MANEAL
C1QTNF6
UMODL1
ARMCX6
ARMCX3
CLIC3
ESR1
ARPC1B
XAB2
STK11
AKAP1
ITPK1
TFAP2C
KRT8
UPF1
HAPLN2
FASN
MSMB
USP31
FRG2C
MSLN
SRRM2
OTUD7B
RGS10
LY6E
HAUS1
ATP5F1A
DECR1
MAMDC4
EDF1
SMTNL2
MAP3K14
PGLYRP2
APOC3
APOA1
FBP1
PDE4DIP
MYB
SERPINF1
CXXC5
PDGFA
SEC14L6
NFKBIA
SYT8
LAMC1
FAM102A
MAD1L1
CELA2A
C1orf162
LRRFIP2
DOK7
IPPK
MIDEAS
FST
FCGR2B
LOC102724770
DGCR6
CALCR
FRG2
VWA2
CRKL
CELA2B
TMEM92
DHX37
BRI3BP
VPS26C
CTSD
FOXK2
GRIK3
ALX4
SLC25A45
FRMD8
AGR3
GPRIN1
PLIN5
LRG1
SPTBN4
BLVRB
GPR37L1
DMRT2
SPOP
COLEC12
AFF1
CCR6
SLC25A36
CCN5
CA12
CBWD5
CBWD3
CBWD6
ALDH3B1
EREG
ABAT
LYPD6B
KIF21A
TBX2
FMN1
CABLES2
PRR5-ARHGAP8
PRR5
LRRC56
HRAS
ACACB
ABCD4
EHF
TTC6
FOXA1
KEAP1
ADAM8
MACC1
DNPEP
CST6
TIFA
ACSS1
TMED8
SAMD15
ARHGEF18
KRT19
ELF1
LONP2
ABCC11
KRT85
MICOS10-NBL1
MICOS10
NFIB
MANBAL
SEMA3B
SEPTIN9
SLC25A47
ZFP36
PLEKHG2
PDE4C
MAPT
UBALD1
MGRN1
PKP3
RETREG1
CHSY1
ZNF79
ISYNA1
RERG
GPC6
UHRF1
MUC1
TUBA1A
BDKRB1
PPP1R12B
EPS15L1
OLFML3
CCDC198
LONRF2
UNKL
IKBKG
G6PD
UGT2B15
MRFAP1
COPS8
KAT6B
ANKH
KIAA0319
SPATS2L
AGPS
LATS1
RHOD
SNAI1
ASB2
LOC102723996
ICOSLG
TNS1
CHST8
FAM187A
GFAP
TMCC1
GPSM1
ADORA1
ARHGEF10L
PAK4
PSD4
LIMS1
ARAP3
TCIRG1
NDUFS8
YPEL2
PTGES
SERPINA1
MIOS
TSSC4
PLCD3
ACBD4
CAPN12
SLC26A1
IDUA
VCAN
LIMS4
KAZN
ST3GAL4
FGR
SERPINA6
NMNAT1
LZIC
FADD
RCOR3
NPEPPS
LOC100130520
CD300H
C17orf77
RAB40C
IER5L
SVIL
KLK14
ART1
RTN1
LRP5L
CDH26
MTRNR2L1
NXNL2
TMEM212
SULT2B1
INSYN1
IRF2BPL
PXDC1
CTR9
DSN1
CUEDC1
TNNI2
CFAP206
ZBTB46
UBL4A
SLC10A3
PCYT1A
BOD1L2
GRM4
SIAH2
TLE1
CBFA2T3
ANKRD2
ZNF285
C16orf74
SCGB3A1
NRP1
EDN1
CCDC200
ALG8
ZBTB37
TPD52L2
ABHD16B
SLC25A42
ETNK2
TTC9B
CCNP
RABGEF1
B3GALNT1
TFAP2A
MFSD10
PLEC
NXT1
GZF1
RPL13
TRH
VEPH1
PERP
KLF16
CERS2
ANXA9
WDR90
MCRIP2
METTL26
NT5DC3
BMP7
SYNE3
NPIPB9
MYZAP
GCOM1
ARL4D
PRDX1
SVEP1
EPB41L1
SLC9A3R2
PLEKHF1
CLASP2
FUT4
NIPSNAP2
MEF2A
RNF144A
BAIAP3
TBKBP1
CYP4F2
TMEM95
KCTD11
KLK13
MAT1A
B4GALT1
WWC1
DHRS3
RTEL1
ATP13A3
RPS6KA2
RIPPLY1
CLDN2
TRMT10B
EBF4
RGL3
RBM43
SIDT2
ANXA2
CSAD
IL2RB
CALHM4
TDRD9
ATP5MPL
SLC43A2
ARFGEF2
LRRC58
SHC2
FRMD5
TJAP1
ATG16L2
MAGI3
SGCA
FAM3B
ADARB1
RECQL4
MFSD3
LRRC14
PTPRR
UQCC2
ELOVL2
GRAMD1A
IL20
MAB21L4
PNKD
ACIN1
FAM228B
TP53I3
SF3B6
GOLM1
RNF170
HOOK3
LFNG
FGFBP2
HOMER2
EIF5AL1
NEFH
TBXA2R
SHANK2
HDAC11
SUSD3
SPRY4
MRGPRG
ELAPOR1
C1orf194
SYNJ2
TNFRSF6B
TAX1BP1
DDX47
ABHD2
DNAJC5B
ATP6AP2
FSIP1
KCNIP2
TUBA3E
ELFN2
JPH2
SPINK13
ABR
SSTR2
SHCBP1L
DNMT3A
CCNL1
PRSS22
SYNPO2L
LPCAT1
TUBA3D
RGS12
SLC35E2A
STMN3
MGAT3
SCUBE2
GDF15
PRDM4
ASCL4
CDK3
COMTD1
P2RX4
RGS3
WNT16
SPTB
TP63
CSF3
MAPKAPK3
CISH
HK1
SLC25A19
CYP4F11
TBX1
NR2F2
FOXN1
DOT1L
TXNRD1
EHD1
DNAJA4
ORAI2
ZNF346
WDR74
STX5
KLK12
ADGRG1
PTP4A2
KRT13
P2RY2
ADCY5
SPATC1L
MTRNR2L2
MSH3
DHFR
MAMDC2
MTRNR2L8
SLC25A1
RPS28
NDUFA7
KIF5C
COL23A1
EFHD2
SP2
PTPRN2
MUC3A
PMF1-BGLAP
PMF1
EAPP
FAM214A
PRUNE1
MINDY1
ARID5B
ZBTB45
SLC27A5
GZMM
CDC34
PRSS27
NDRG1
CASTOR1
PLXNB1
AKNA
SURF4
NFE2L1
TMEM210
LRRC26
RGPD2
RGPD1
MTRNR2L9
SPAAR
HRCT1
PHRF1
REM2
COX7A2L
APTX
C20orf203
ZFYVE28
CFAP99
TST
MPST
SDC4
MTRNR2L10
SLC1A5
SCARB1
TTC39C
EMILIN2
DNAJA1
POLR3F
DZANK1
CPA6
EPN1
FIGNL2
USP17L21
USP17L20
USP17L12
DNM2
MYLK2
ARHGEF16
USP17L22
PLCB1
CCR7
TMEM242
UNC45B
NLE1
LEMD2
ROBO3
ERN1
FBXW8
PTH1R
HSPA4
CDR2L
USF2
TRIM48
RFX1
TAF12
ITGB5
OBSL1
INHA
CLCN4
ZNF710
TSEN54
CASKIN2
MFSD6
AP1B1
SLC45A4
DDX10
NLK
SLC37A3
RAB19
DHRS2
HNRNPL
ATXN1
TSPEAR
KRTAP10-12
BAMBI
ACOX3
GINS3
DMPK
MAPK13
LTBP1
RNPEPL1
OSBP
DUSP28
ANKMY1
CRYAA2
CRYAA
DLG4
RCAN1
C3
CDC42EP3
CCDC9B
CDH18
EXT2
MIDN
JUP
CALML5
TTLL6
PI4KB
MARCHF10
RHOBTB1
TBC1D14
ACADVL
EVI5L
RALGPS2
MTRNR2L6
NT5C2
DEF6
NR2F6
SDC1
SLC29A1
MYMX
GPRC5A
ZBTB7A
FABP3
FAM184A
IMMP2L
BCL3
ATG9B
ABCB8
NBPF15
HSP90AB1
OAZ3
PABPC1
HKDC1
ME3
DLC1
ZMYND11
APOA4
PPL
NAIP
UBE2H
SNX10
OXT
TOM1L2
HSPB1
DRC3
MTA1
SLC6A6
NBPF12
RMND5B
SIN3B
NCAPH
ITPRIPL1
FNIP2
KLRF2
CIC
NTMT1
PDLIM2
GATAD2A
PMEPA1
ITGB2
VWA1
TMEM88B
CHD9
ZNF687
TWF2
PPM1M
H4C14
H3C15
H3C14
FOXO6
C9orf50
ZNF552
PARP16
MAPKAPK5
PPP2R5E
PABPN1
KCNH7
SLC35E1
ASPG
POLDIP3
TPTEP2-CSNK1E
FAM234B
JARID2
H4C15
LGR6
ZNF385B
ATP4A
FARSB
FUT7
CST9
C9orf139
ABCA2
SLC37A1
TRPM7
ZBTB7B
RABL6
CCDC183
USP17L13
RGS19
OPRL1
LKAAEAR1
ZNF746
TSPAN5
BHLHE40
RAI14
PCIF1
FBH1
ANKRD16
PAX9
EOLA1
IL1F10
TMEM147
HSFX3
TPBG
ZSWIM6
CRK
CDH11
CAND1
ZNRF2
NPIPA3
NPIPA2
AMOTL2
ARHGAP29
PTMA
TEX36
NDRG4
B3GNT3
SETD2
ENTPD8
PALLD
PLA2G10
PAQR5
STC2
HSFX4
EOLA2
PGF
H2AC19
H2AC18
HUWE1
ABCA3
TMEM107
EPPK1
RASEF
SH3GLB2
MIGA2
PADI3
MTUS1
LARGE1
SULT1A4
SULT1A3
FUS
FYB2
SPATA9
RHOBTB3
TNK2
GLRX5
ZNFX1
PDCD6IP
AFAP1
MERTK
ZMYND8
SLC2A12
ATF4
CIB2
RAB31
ABCD3
RPEL1
TJP3
SIRT4
ANKHD1-EIF4EBP3
ANKHD1
ASS1
SH3YL1
ACP1
TKTL2
FECH
ADCY9
NPIPB6
SLC25A41
KHSRP
OPN4
CNOT3
DNMBP
CPN2
SART3
ISCU
ETV4
KLF10
MICAL3
CPNE6
CARMIL3
USP17L17
USP17L15
UNC5B
S100P
RBBP5
LSMEM2
B2M
USP17L11
PRSS23
PEX10
BATF
PAX4
PKIB
MYBPH
HASPIN
CYB561
LENG1
ADD3
KIF2C
ENHO
LCMT1
GPR153
COL26A1
ANAPC7
NUP85
GJD3
BTNL9
ZNF229
TTC21B
ZNHIT2
TM7SF2
H2BC5
H1-4
INAVA
LHX4
ESRP2
SLC16A3
JUNB
MIEF1
SASH3
USP17L18
KLRC3
EXOSC5
BCKDHA
A4GALT
SRSF7
H4C9
TCF21
CACNA1H
HID1
ARPIN-AP3S2
ARPIN
TRAF7
RPS29
RAB26
GPD1L
MOCS1
MEIS1
LAMB2
CSK
ANGEL1
TBC1D16
GAGE2A
SH3BGR
LCA5L
DLL3
SLC19A1
ACBD6
GTF2B
AZGP1
ENKUR
DYSF
ZBTB5
HOXC6
HOXC5
CD22
H4C12
H4C11
SMAD3
UBE2I
TGIF1
KCNK7
C19orf48
ATP5MG
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
NCOA3
RAB5B
PMEL
HRK
CDK2
UFM1
TRIM2
IMPA2
CACNB2
MACROD1
USP17L10
PRSS8
PNO1
SF3B3
COG4
FBN1
ZNF91
AHCYL1
UBE2L3
MYH11
HSH2D
GAA
PHF13
KLHL21
ZBTB42
AKT1
BMP4
ZNF576
IRGQ
GOSR2
TOMM40
PSMD12
TTC28
MRPS7
MIF4GD
GGA3
UPK3A
SH2D3C
DDIT4
DCLK1
ZFP37
H4C3
H1-6
ZNF654
CGGBP1
TSN
PCNX3
MAP3K11
SBSPON
SLC11A2
ITGB3
RAD23A
H2BC14
H2AC14
CALR
SEMA4G
SCIN
H2BC15
H2AC15
C1orf198
PCTP
NVL
NNAT
CASZ1
BLCAP
ZNF335
ZRANB2
GHRH
EEF1A1
PPP2R3A
IVD
SULT1A1
EIF3E
RXRA
RPS27
RAB13
KCTD1