ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9932069 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◢ SRX017710: CD4+ T cells

◢ SRX5090184: GM12878

◢ SRX10475642: Hep G2

◢ SRX10475643: Hep G2

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◢ SRX9932062: MCF-7

◢ SRX9932063: MCF-7

◢ SRX9932064: MCF-7

◢ SRX9932065: MCF-7

◢ SRX9932066: MCF-7

◢ SRX9932067: MCF-7

◢ SRX9932068: MCF-7

◣ SRX9932069: MCF-7

◢ SRX9932070: MCF-7

◢ SRX9932071: MCF-7

◢ SRX9932072: MCF-7

◢ SRX9932073: MCF-7

◢ SRX9932074: MCF-7

◢ SRX9932075: MCF-7

◢ SRX9932076: MCF-7

◢ SRX9932077: MCF-7

◢ SRX23330419: MDA-MB-231

◢ SRX23330420: MDA-MB-231

◢ SRX23330421: MDA-MB-231

◢ SRX23330422: MDA-MB-231

◢ SRX23330424: MDA-MB-231

◢ SRX23330425: MDA-MB-231

◢ HDAC6: STRING

IGFBP4
TFF1
GREB1
TSKU
CASP7
TMIGD3
ADORA3
FKBP4
IER3
FLOT1
IL24
HSPB8
PDZK1
MYOG
SLC25A25
NAIF1
RARA
TMEM104
NAT9
STARD10
OSGIN1
PRLH
PPP2R2C
FAM174B
FREM2
ADAMTSL5
FILIP1L
SPINK4
SGK3
SBNO2
NBPF4
SLC22A5
GSG1L
YIF1B
KCNK6
RNF223
TPD52L1
VASN
PARD6B
LMAN1L
CPLX3
OVOL2
DCAKD
NBPF6
RPS6KL1
ST8SIA6
AMBP
CYP1B1
CAP2
CDC42EP1
LGALS2
CANT1
C1QTNF1
TMEM229B
ATP6AP1
DNASE1L1
SFXN2
ARL3
NAV2
UBE2T
DGKZ
SCOC
RAPGEFL1
TIPARP
CELSR2
PPARGC1A
KRT37
N4BP3
CCDC88C
TTC39A
CHPT1
BACE1
TH
INS-IGF2
INS
MANEAL
MLPH
CDH1
YBEY
MCM3AP
SYT12
HAAO
IL19
CTAG2
SLC25A24
ACOT6
RET
MCF2L
CTBP1
PLEKHH1
NBPF1
C19orf33
KDM4B
AMZ1
SLC9A3R1
ESR1
SNX24
KRT8
PTPA
CRAT
ATP8B1
STK11
HAPLN2
DUX4
PADI4
C1QTNF6
HAUS1
ATP5F1A
NEMP1
NAB2
B3GNT6
MYEOV
HEG1
USP31
MAP3K14
ARPC1B
NHSL1
ZNF185
SLC7A5
APOC3
APOA1
MYB
ARMCX6
ARMCX3
SRRM2
LY6E
MSMB
SEC14L6
XAB2
FRG2C
SPOP
LRRFIP2
PDE4DIP
MSLN
CALCR
ITPK1
VPS26C
AKAP1
FASN
CLIC3
TFAP2C
SERPINF1
LOC102724770
DGCR6
PGLYRP2
LAMC1
NFKBIA
SLC25A45
FRMD8
RGS10
CRKL
FOXK1
SYT8
DOK7
PDGFA
FBP1
OTUD7B
UMODL1
CXXC5
MAMDC4
EDF1
CCN5
ACACB
CELA2B
SLC25A42
UGT2B15
SMTNL2
FST
EPS15L1
CABLES2
CCR6
SLC25A47
GPRIN1
UPF1
CUEDC1
SPATS2L
SPTBN4
BLVRB
OLFML3
SLC25A36
VWA2
C1orf162
MIDEAS
MAD1L1
NRP1
IPPK
PRR5-ARHGAP8
PRR5
AGR3
MICOS10-NBL1
MICOS10
FCGR2B
LONP2
ABCC11
CBWD5
CBWD3
KRT19
PLIN5
LRG1
ARHGEF18
ABAT
DHX37
BRI3BP
ANKH
ALX4
TMEM92
GRIK3
EREG
FMN1
GPR37L1
ALDH3B1
DECR1
CA12
CELA2A
TBX2
NMNAT1
LZIC
SEPTIN9
INSYN1
BDKRB1
DMRT2
LYPD6B
RHOD
CTSD
SERPINA1
ABCD4
AFF1
KRT85
AGPS
ZNF79
ADAM8
RETREG1
KIF21A
FOXK2
CHSY1
KAT6B
CBWD6
RAB40C
NFIB
KEAP1
ATP6AP2
LRP5L
FAM102A
VCAN
UBALD1
MGRN1
COLEC12
TUBA1A
ZFP36
PLEKHG2
TMCC1
TRH
ZBTB37
NPEPPS
EHF
MANBAL
MUC1
MRFAP1
PAK4
MAT1A
PDE4C
PPP1R12B
FRG2
RERG
CAPN12
MAPT
RTN1
KIAA0319
CSAD
LIMS1
CST6
TIFA
MIOS
CCDC198
COPS8
CTR9
YPEL2
KLK14
ARAP3
TNS1
LRRC56
HRAS
SYNE3
IKBKG
G6PD
UHRF1
UNKL
HDAC11
TTC6
FOXA1
LONRF2
ELF1
NXNL2
SCGB3A1
PKP3
PLEC
TMED8
SAMD15
GPC6
LATS1
TCIRG1
NDUFS8
ATP13A3
SLC26A1
IDUA
EBF4
TTC9B
CCNP
PSD4
PTGES
SIAH2
PLCD3
ACBD4
FUT4
CFAP206
TSSC4
MACC1
KLK12
SVEP1
ANKRD2
ELOVL2
FAM187A
GFAP
TLE1
LRRC58
CHST8
TFAP2A
BOD1L2
PRDX1
ARHGEF10L
MYZAP
GCOM1
TTC39C
FGR
PCYT1A
IL20
NXT1
GZF1
SNAI1
ST3GAL4
TBKBP1
RCOR3
ETNK2
MTRNR2L1
CDC42EP3
BMP7
TSPEAR
KRTAP10-12
CCDC200
CDK3
ART1
EIF5AL1
LOC102723996
ICOSLG
GPRC5A
FAM214A
ACSS1
LOC100130520
CD300H
C17orf77
KAZN
DNPEP
MGAT3
FAM3B
ADGRG1
GDF15
VEPH1
IL2RB
PXDC1
EFHD2
ATG9B
ABCB8
GPSM1
TPD52L2
ABHD16B
EDN1
FSIP1
CLASP2
ADARB1
WDR74
STX5
DHRS3
DSN1
CCR7
KCNH7
SHC2
TUBA3E
CPA6
RPS6KA2
ISYNA1
CDH26
CYP4F2
IER5L
FADD
ZNF285
PERP
SLC25A1
RALGPS2
ADORA1
ALG8
HSPA4
TUBA3D
CCNL1
C16orf74
SYNPO2L
LIMS4
NT5DC3
KLK13
COMTD1
NPIPB9
SVIL
ASB2
FAM228B
TP53I3
SF3B6
TNNI2
ARL4D
MFSD6
TJAP1
RABGEF1
GOLM1
EPB41L1
COX7A2L
GINS3
TMEM212
SLC9A3R2
CBFA2T3
ABHD2
MAPKAPK3
CISH
MARCHF10
WDR90
MCRIP2
METTL26
TMEM95
KCTD11
CERS2
ANXA9
NDRG1
NT5C2
RGL3
SLC1A5
SERPINA6
MFSD10
GRAMD1A
RIPPLY1
CLDN2
CDH18
SHCBP1L
KLF16
ACIN1
WNT16
REM2
ASPG
RECQL4
MFSD3
LRRC14
SEMA3B
RNF144A
P2RX4
CALML5
NIPSNAP2
SGCA
RHOBTB1
IRF2BPL
PLCB1
SHANK2
RNF170
HOOK3
MYBPH
ELFN2
HSPB1
PNKD
ZBTB46
NR2F6
ORAI2
PTH1R
KLRF2
NR2F2
CALHM4
SLC35E2A
PTPRR
WWC1
OBSL1
INHA
PRSS22
UBL4A
SLC10A3
NAIP
MRGPRG
NEFH
ROBO3
DDX10
OXER1
SIDT2
SCARB1
RPL13
TBC1D16
DLC1
EOLA1
HSFX3
LPCAT1
ANXA2
TRPM7
KCNIP2
ABR
TEX36
RPEL1
B4GALT1
SLC37A3
RAB19
RGS12
SULT2B1
FOXN1
LFNG
SHANK1
CLEC11A
GRM4
ERN1
FAM234B
ITGB5
SPRY4
SMAD3
RCAN1
ADCY5
RTEL1
STMN3
FAM184A
B3GALNT1
ZFYVE28
CFAP99
APOA4
DMPK
PHF13
KLHL21
DNAJC5B
TDRD9
ATP5MPL
PLEKHF1
PALLD
FGFBP2
MAGI3
JPH2
IMMP2L
TAX1BP1
STC2
ZBTB7A
TKTL2
PGF
TCF21
CPN2
GZMM
CDC34
SDC4
ITGB2
INAVA
TPBG
SETD2
PRSS23
P2RY2
ACOX3
ZSWIM6
NBPF15
HK1
FBXO34
EXT2
ENTPD8
LCMT1
SYNJ2
HOMER2
EHD1
HKDC1
RMND5B
PLXNB1
FIGNL2
SASH3
SUSD3
KRT13
IL1F10
TXNRD1
ME3
CST9
HUWE1
AP1B1
UQCC2
ARID5B
BCL3
PPP2R5E
BATF
SLC43A2
CCDC9B
PTP4A2
PADI3
JUND
IQCN
ZNF346
NPIPA3
NPIPA2
CSF3
ZNF552
DDX47
SURF4
SLC7A2
TSEN54
CASKIN2
NBPF12
UBE2H
FNIP2
BAMBI
ARPIN-AP3S2
ARPIN
UPK3A
DHRS2
RGS3
PRSS27
SCIN
HSFX4
EOLA2
SLC19A2
RP1
CYP3A43
B3GNT3
CYP4F11
VWA1
TMEM88B
ENKUR
KDM2A
ETV4
TTC28
KIT
TMEM210
LRRC26
CASTOR1
TST
MPST
SIN3B
AGFG1
PAX9
C4orf19
ZNF710
NCOA4
AKNA
CLCN4
TNFRSF6B
ARFGEF2
PLA2G10
ABCA3
LARGE1
AZGP1
BMP4
DEF6
SPATA9
RHOBTB3
MIDN
DNAJA4
ZNF385B
PGPEP1L
EAPP
COL26A1
ADAMTS8
DNMT3A
SPTB
PTMA
TTLL6
BHLHE40
ADD3
SLC11A2
SLC6A6
USF2
CHD9
SPINK13
SNX10
TSPAN5
TBX1
ATXN1
FRMD5
FYB2
USP17L21
USP17L20
USP17L12
USP17L22
ZNF500
PROP1
OPN4
TGIF1
TRMT10B
PLGRKT
CD274
LARP1
ELAPOR1
C1orf194
TP63
LSMEM2
HES1
MS4A6E
ELF3
PARP16
DOT1L
SIRT4
TJP3
TIMM13
KIF2C
SPATC1L
MTRNR2L2
MSH3
DHFR
MAMDC2
MTRNR2L8
RPS28
NDUFA7
KIF5C
COL23A1
SP2
PTPRN2
MUC3A
PMF1-BGLAP
PMF1
PRUNE1
MINDY1
SLC25A19
ZBTB45
SLC27A5
NFE2L1
RGPD2
RGPD1
MTRNR2L9
SPAAR
HRCT1
PHRF1
APTX
C20orf203
MTRNR2L10
EMILIN2
DNAJA1
POLR3F
DZANK1
EPN1
DNM2
MYLK2
ARHGEF16
TMEM242
UNC45B
NLE1
LEMD2
FBXW8
CDR2L
TRIM48
RFX1
TAF12
SLC45A4
NLK
HNRNPL
MAPK13
LTBP1
RNPEPL1
OSBP
DUSP28
ANKMY1
CRYAA2
CRYAA
DLG4
C3
TBXA2R
JUP
PI4KB
TBC1D14
ACADVL
EVI5L
MTRNR2L6
SDC1
SLC29A1
MYMX
FABP3
HSP90AB1
OAZ3
PABPC1
ZMYND11
PPL
OXT
TOM1L2
DRC3
MTA1
NCAPH
ITPRIPL1
CIC
NTMT1
PDLIM2
GATAD2A
PMEPA1
RBM43
SSTR2
ZNF687
TWF2
PPM1M
H4C14
H3C15
H3C14
FOXO6
C9orf50
MAPKAPK5
MEF2A
PABPN1
PRDM4
ASCL4
SLC35E1
POLDIP3
TPTEP2-CSNK1E
JARID2
H4C15
LGR6
ATP4A
FARSB
FUT7
C9orf139
ABCA2
SLC37A1
ZBTB7B
RABL6
CCDC183
USP17L13
RGS19
OPRL1
LKAAEAR1
ZNF746
RAI14
PCIF1
FBH1
ANKRD16
TMEM147
CRK
BAIAP3
CDH11
CAND1
ZNRF2
AMOTL2
ARHGAP29
ATG16L2
NDRG4
PAQR5
H2AC19
H2AC18
TMEM107
EPPK1
RASEF
SH3GLB2
MIGA2
MTUS1
SULT1A4
SULT1A3
FUS
TNK2
GLRX5
ZNFX1
PDCD6IP
AFAP1
MERTK
ZMYND8
SLC2A12
ATF4
CIB2
RAB31
ABCD3
ANKHD1-EIF4EBP3
ANKHD1
ASS1
SH3YL1
ACP1
FECH
ADCY9
NPIPB6
SLC25A41
KHSRP
CNOT3
DNMBP
SART3
ISCU
KLF10
MICAL3
CPNE6
CARMIL3
USP17L17
USP17L15
UNC5B
S100P
RBBP5
B2M
USP17L11
PEX10
PAX4
PKIB
HASPIN
CYB561
LENG1
ENHO
GPR153
ANAPC7
NUP85
GJD3
BTNL9
ZNF229
TTC21B
ZNHIT2
TM7SF2
H2BC5
H1-4
LHX4
ESRP2
SLC16A3
JUNB
MIEF1
USP17L18
KLRC3
EXOSC5
BCKDHA
A4GALT
SRSF7
H4C9
CACNA1H
HID1
MAB21L4
TRAF7
RPS29
RAB26
GPD1L
MOCS1
MEIS1
LAMB2
CSK
ANGEL1
GAGE2A
SH3BGR
LCA5L
DLL3
SLC19A1
ACBD6
GTF2B
DYSF
ZBTB5
HOXC6
HOXC5
CD22
H4C12
H4C11
UBE2I
KCNK7
C19orf48
ATP5MG
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
NCOA3
RAB5B
PMEL
HRK
CDK2
UFM1
TRIM2
IMPA2
CACNB2
MACROD1
USP17L10
PRSS8
PNO1
SF3B3
COG4
FBN1
ZNF91
AHCYL1
UBE2L3
MYH11
HSH2D
GAA
ZBTB42
AKT1
ZNF576
IRGQ
GOSR2
TOMM40
PSMD12
MRPS7
MIF4GD
GGA3
SH2D3C
DDIT4
DCLK1
ZFP37
H4C3
H1-6
ZNF654
CGGBP1
TSN
PCNX3
MAP3K11
SBSPON
ITGB3