ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9932077 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◢ SRX017710: CD4+ T cells

◢ SRX5090184: GM12878

◢ SRX10475642: Hep G2

◢ SRX10475643: Hep G2

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◢ SRX9932062: MCF-7

◢ SRX9932063: MCF-7

◢ SRX9932064: MCF-7

◢ SRX9932065: MCF-7

◢ SRX9932066: MCF-7

◢ SRX9932067: MCF-7

◢ SRX9932068: MCF-7

◢ SRX9932069: MCF-7

◢ SRX9932070: MCF-7

◢ SRX9932071: MCF-7

◢ SRX9932072: MCF-7

◢ SRX9932073: MCF-7

◢ SRX9932074: MCF-7

◢ SRX9932075: MCF-7

◢ SRX9932076: MCF-7

◣ SRX9932077: MCF-7

◢ SRX23330419: MDA-MB-231

◢ SRX23330420: MDA-MB-231

◢ SRX23330421: MDA-MB-231

◢ SRX23330422: MDA-MB-231

◢ SRX23330424: MDA-MB-231

◢ SRX23330425: MDA-MB-231

◢ HDAC6: STRING

GREB1
IGFBP4
TFF1
IER3
FLOT1
CASP7
RARA
TMEM104
NAT9
TSKU
TMIGD3
ADORA3
IL24
FKBP4
HSPB8
PDZK1
DCAKD
ADAMTSL5
MYOG
CDC42EP1
LGALS2
PRLH
STARD10
SLC25A25
NAIF1
PPP2R2C
FAM174B
OSGIN1
YIF1B
KCNK6
RPS6KL1
SBNO2
ARPC1B
NBPF4
RAPGEFL1
VASN
SLC22A5
N4BP3
RNF223
FREM2
GSG1L
NBPF6
FILIP1L
PARD6B
SCOC
CANT1
C1QTNF1
SPINK4
LMAN1L
CPLX3
MLPH
FOXK1
TH
INS-IGF2
INS
CTBP1
ST8SIA6
SNX24
TTC39A
DGKZ
OTUD7B
ATP8B1
SYT12
MCF2L
UBE2T
RET
MSLN
SFXN2
ARL3
MAMDC4
EDF1
TPD52L1
CCDC88C
HAAO
MAP3K14
C19orf33
OVOL2
PADI4
SLC25A24
MANEAL
CELSR2
SGK3
NEMP1
NAB2
SRRM2
BACE1
AKAP1
TIPARP
ATP6AP1
DNASE1L1
CYP1B1
KDM4B
AMBP
TMEM229B
NFKBIA
ZNF185
YBEY
MCM3AP
CAP2
SLC7A5
B3GNT6
LY6E
AMZ1
CLIC3
CHPT1
LYPD6B
STK11
USP31
PTPA
CRAT
CTAG2
FAM102A
KRT37
FASN
CABLES2
NHSL1
DUX4
C1QTNF6
LRRFIP2
FRG2C
SLC9A3R1
PKP3
NBPF1
SEC14L6
LRRC56
HRAS
GPRIN1
ITPK1
PPARGC1A
HAPLN2
OLFML3
PDGFA
NAV2
ALX4
CST6
CXXC5
HAUS1
ATP5F1A
PLEKHH1
SPTBN4
BLVRB
CRKL
APOC3
APOA1
CDH1
MSMB
AFF1
ALDH3B1
UPF1
LOC102724770
DGCR6
MYB
LAMC1
CHSY1
IL19
DOK7
SLC25A45
FRMD8
HEG1
PAK4
SNAI1
CLASP2
UNKL
VPS26C
ARMCX6
ARMCX3
MYEOV
ESR1
KRT85
KAZN
KEAP1
PGLYRP2
SLC25A36
SYT8
CTSD
CELA2A
IPPK
PRR5-ARHGAP8
PRR5
WWC1
RAB40C
PDE4DIP
SERPINF1
MIDEAS
FST
UMODL1
TIFA
B4GALT1
CCN5
RPS28
NDUFA7
ACOT6
KLF16
XAB2
SLC25A1
RECQL4
MFSD3
LRRC14
KCNIP2
ACSS1
FOXK2
KRT8
ADGRG1
FCGR2B
SLC9A3R2
SMTNL2
GPR37L1
MFSD10
PLIN5
LRG1
KIAA0319
SEPTIN9
PLCD3
ACBD4
ADAM8
ABCD4
CAPN12
UHRF1
TCIRG1
NDUFS8
EPS15L1
ZBTB37
FRG2
KIF21A
INSYN1
CERS2
ANXA9
SGCA
CDK3
CUEDC1
PDE4C
PPP1R12B
SLC25A19
GRM4
MICOS10-NBL1
MICOS10
ATP13A3
CBFA2T3
CBWD5
CBWD3
GPC6
SEMA3B
SPOP
ASB2
SYNPO2L
APTX
DNAJA1
CCDC198
CSAD
ZBTB46
PRDX1
COPS8
RGS10
TBX2
FBP1
TTC6
FOXA1
ZBTB45
SLC27A5
CBWD6
CCR6
SPATS2L
MAD1L1
CELA2B
MIOS
ARHGEF18
CA12
TRH
SLC25A42
ACIN1
RGL3
DMRT2
ALG8
ZFP36
PLEKHG2
B3GALNT1
DECR1
DSN1
RHOD
C1orf162
MGAT3
ABAT
DNPEP
RCOR3
ATP6AP2
GPSM1
AKNA
KRT19
VWA2
FGR
CALCR
OAZ3
MACC1
TJAP1
SIAH2
PNKD
DHX37
BRI3BP
ISYNA1
PSD4
MRGPRG
RETREG1
FUT4
ZNF285
UGT2B15
TFAP2C
TUBA3E
AGPS
IL2RB
TPD52L2
ABHD16B
VEPH1
ARAP3
LATS1
EBF4
SYNE3
DHRS3
ANKRD2
TAX1BP1
DLG4
ACADVL
LONP2
ABCC11
LRP5L
WNT16
NAIP
FMN1
GRIK3
TMCC1
CHST8
RABGEF1
SULT2B1
MAPT
ELF1
C16orf74
P2RY2
CSF3
SLC26A1
IDUA
NT5DC3
TUBA3D
SERPINA6
NRP1
LTBP1
SVIL
LRRC58
CDH26
REM2
CASTOR1
DEF6
RNPEPL1
DUSP28
ANKMY1
ARHGEF10L
TNS1
NPIPB9
PRUNE1
MINDY1
ART1
CTR9
NXNL2
TMED8
SAMD15
TMEM92
EFHD2
SYNJ2
GZMM
CDC34
SLC25A47
SHC2
ZFYVE28
CFAP99
SERPINA1
ELAPOR1
C1orf194
CLCN4
FAM228B
TP53I3
SF3B6
DOT1L
MUC1
TBX1
SURF4
FAM187A
GFAP
ARL4D
HDAC11
NEFH
TST
MPST
NBPF15
TRPM7
MTRNR2L1
ETNK2
JUP
PTGES
ZNF79
LIMS1
VCAN
NFE2L1
MRFAP1
PLEC
SLC29A1
MYMX
EDN1
CDR2L
USF2
PRSS27
WDR90
MCRIP2
METTL26
TNNI2
ZNHIT2
TM7SF2
PMEPA1
NTMT1
C9orf50
EIF5AL1
ITGB5
PDCD6IP
COLEC12
NFIB
FBXW8
ATXN1
RTEL1
STMN3
UBALD1
MGRN1
EPB41L1
TSEN54
CASKIN2
MYLK2
ZNF346
OXT
ORAI2
FAM214A
PDLIM2
DNMT3A
LOC100130520
CD300H
C17orf77
ROBO3
ANKH
LAMB2
PLXNB1
DLC1
NMNAT1
LZIC
DMPK
FABP3
PXDC1
NIPSNAP2
GDF15
SIDT2
AMOTL2
FOXN1
IMMP2L
EXT2
CCDC200
YPEL2
EREG
ZBTB42
AKT1
ERN1
ANXA2
TBC1D14
NXT1
GZF1
SDC1
ARHGEF16
HID1
MAPKAPK3
CISH
AHCY
LSMEM2
PERP
FNIP2
SLC1A5
CD22
RNF144A
COMTD1
NT5C2
MYZAP
GCOM1
RERG
FUT7
C9orf139
ABCA2
ATP4A
CPN2
LOXL4
RCAN1
FOXO6
PEX10
SVEP1
CFAP206
SLC35E1
ELFN2
TUBA1A
AGR3
C20orf203
LONRF2
KAT6B
NDRG1
ADORA1
SPATA9
RHOBTB3
KLRC3
HOGA1
C10orf62
MANBAL
DDX10
UQCC2
FIGNL2
CCR7
JUND
IQCN
PLCB1
TMEM95
KCTD11
OBSL1
INHA
MIDN
GLRX5
COX7A2L
BDKRB1
MED12L
RNF170
HOOK3
MAT1A
PI4KB
KLF10
SH3YL1
ACP1
SCARB1
ZNF710
SLC37A1
ST3GAL4
SUSD3
RPL13
TTC9B
CCNP
SLC45A4
ZNF91
SIN3B
FGFBP2
SHANK1
CLEC11A
CALML5
MTA1
ZNF746
MAGI3
ZMYND11
TIAF1
ZBTB7B
HSPA4
AP1B1
ARID5B
PTH1R
TDRD9
ATP5MPL
ADCY9
ZBTB5
BCL3
SH3GLB2
MIGA2
TBXA2R
HSH2D
ELF5
GOLM1
SPRY4
DDX47
USP17L21
USP17L20
USP17L12
USP17L22
IL1F10
MTUS1
SLC46A3
D2HGDH
EMP2
CAND1
STC2
RPS6KA2
CCDC9B
TMEM147
C4orf19
PPP1R9B
TTC39C
KLK12
MAPK13
TTLL6
NPIPB6
UBL4A
SLC10A3
LFNG
ABR
PPL
TPTEP2-CSNK1E
PROP1
SCGB3A1
IL20
RAB31
SLC35E2A
BOD1L2
TRMT10B
NDRG4
NNMT
ZBTB7A
SEMA4G
NECAB3
ACTL10
PCYT1A
SPTB
LCMT1
TMEM210
LRRC26
ADARB1
RTN1
TSSC4
RAI14
BAIAP3
P2RX4
PABPC1
NCAPH
ITPRIPL1
GINS3
NR2F6
VWA1
TMEM88B
PGF
BMP7
NPEPPS
BHLHE40
MIPOL1
WDR74
STX5
LILRB5
ASPG
SLC19A1
HK1
ATG16L2
IVD
ZC2HC1C
ACYP1
TBKBP1
HSP90AB1
CHD9
TUBA8
SOD2
ORMDL3
GSDMB
ACAT2
INPP4B
SNX10
LPCAT1
GRAMD1A
SETD2
GPR153
SOAT2
IGFBP6
SPIRE2
NR2F2
UBTF
CSK
KRT13
ARHGEF28
CYP4F11
IKBKG
G6PD
FRMD5
TTC28
TANC2
JUNB
HOOK2
SPATC1L
MTRNR2L2
MSH3
DHFR
MAMDC2
EHF
MTRNR2L8
ACACB
KIF5C
COL23A1
KLK14
SP2
PTPRN2
MUC3A
ABHD2
TLE1
PMF1-BGLAP
PMF1
EAPP
LOC102723996
ICOSLG
TFAP2A
CYP4F2
RGPD2
RGPD1
MTRNR2L9
SPAAR
HRCT1
CCNL1
PHRF1
SLC43A2
SDC4
SHANK2
MTRNR2L10
DNAJC5B
ELOVL2
EMILIN2
POLR3F
DZANK1
CPA6
EPN1
DNM2
IER5L
TMEM212
PTPRR
TMEM242
UNC45B
NLE1
LEMD2
LIMS4
TXNRD1
KLK13
TRIM48
RFX1
TAF12
FSIP1
MFSD6
NLK
RIPPLY1
CLDN2
SLC37A3
RAB19
DHRS2
HNRNPL
FAM3B
TSPEAR
KRTAP10-12
BAMBI
RGS12
ACOX3
JPH2
OSBP
CRYAA2
CRYAA
C3
CDC42EP3
CDH18
MARCHF10
RHOBTB1
EVI5L
RALGPS2
MTRNR2L6
ADCY5
GPRC5A
FAM184A
PLEKHF1
DNAJA4
ATG9B
ABCB8
RGS3
HKDC1
CALHM4
ME3
APOA4
UBE2H
FADD
TOM1L2
HSPB1
DRC3
SLC6A6
NBPF12
HOMER2
EHD1
RMND5B
PRSS22
ARFGEF2
KLRF2
CIC
GATAD2A
TP63
ITGB2
RBM43
SSTR2
ZNF687
TWF2
PPM1M
H4C14
H3C15
H3C14
ZNF552
PARP16
MAPKAPK5
MEF2A
PPP2R5E
PABPN1
KCNH7
PRDM4
ASCL4
POLDIP3
FAM234B
JARID2
H4C15
LGR6
SHCBP1L
ZNF385B
FARSB
CST9
RABL6
CCDC183
USP17L13
RGS19
OPRL1
LKAAEAR1
TSPAN5
PCIF1
FBH1
ANKRD16
PAX9
EOLA1
HSFX3
TPBG
ZSWIM6
CRK
CDH11
PTP4A2
ZNRF2
NPIPA3
NPIPA2
ARHGAP29
PTMA
TEX36
B3GNT3
ENTPD8
PALLD
PLA2G10
PAQR5
HSFX4
EOLA2
H2AC19
H2AC18
HUWE1
ABCA3
TMEM107
EPPK1
RASEF
PADI3
LARGE1
SULT1A4
SULT1A3
FUS
FYB2
TNK2
ZNFX1
AFAP1
MERTK
ZMYND8
SLC2A12
ATF4
CIB2
ABCD3
RPEL1
TJP3
SIRT4
ANKHD1-EIF4EBP3
ANKHD1
ASS1
TKTL2
FECH
SLC25A41
KHSRP
OPN4
CNOT3
DNMBP
SART3
ISCU
ETV4
MICAL3
CPNE6
CARMIL3
USP17L17
USP17L15
UNC5B
S100P
RBBP5
B2M
USP17L11
PRSS23
BATF
PAX4
PKIB
MYBPH
HASPIN
CYB561
LENG1
ADD3
KIF2C
ENHO
COL26A1
ANAPC7
NUP85
GJD3
BTNL9
ZNF229
TTC21B
H2BC5
H1-4
INAVA
LHX4
ESRP2
SLC16A3
MIEF1
SASH3
USP17L18
EXOSC5
BCKDHA
A4GALT
SRSF7
H4C9
TCF21
CACNA1H
ARPIN-AP3S2
ARPIN
MAB21L4
TRAF7
RPS29
RAB26
GPD1L
MOCS1
MEIS1
ANGEL1
TBC1D16
GAGE2A
SH3BGR
LCA5L
DLL3
ACBD6
GTF2B
AZGP1
ENKUR
DYSF
HOXC6
HOXC5
H4C12
H4C11
SMAD3
UBE2I
TGIF1
KCNK7
C19orf48
ATP5MG
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
NCOA3
RAB5B
PMEL
HRK
CDK2
UFM1
TRIM2
SPINK13
IMPA2
CACNB2
MACROD1
USP17L10
PRSS8
PNO1
SF3B3
COG4
FBN1
AHCYL1
IRF2BPL
UBE2L3
MYH11
GAA
PHF13
KLHL21
BMP4
ZNF576
IRGQ
GOSR2
TOMM40
PSMD12
MRPS7
MIF4GD
GGA3
UPK3A
SH2D3C
DDIT4
DCLK1