ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9932068 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◢ SRX017710: CD4+ T cells

◢ SRX5090184: GM12878

◢ SRX10475642: Hep G2

◢ SRX10475643: Hep G2

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◢ SRX9932062: MCF-7

◢ SRX9932063: MCF-7

◢ SRX9932064: MCF-7

◢ SRX9932065: MCF-7

◢ SRX9932066: MCF-7

◢ SRX9932067: MCF-7

◣ SRX9932068: MCF-7

◢ SRX9932069: MCF-7

◢ SRX9932070: MCF-7

◢ SRX9932071: MCF-7

◢ SRX9932072: MCF-7

◢ SRX9932073: MCF-7

◢ SRX9932074: MCF-7

◢ SRX9932075: MCF-7

◢ SRX9932076: MCF-7

◢ SRX9932077: MCF-7

◢ SRX23330419: MDA-MB-231

◢ SRX23330420: MDA-MB-231

◢ SRX23330421: MDA-MB-231

◢ SRX23330422: MDA-MB-231

◢ SRX23330424: MDA-MB-231

◢ SRX23330425: MDA-MB-231

◢ HDAC6: STRING

GREB1
TFF1
IL24
IGFBP4
PARD6B
TMIGD3
ADORA3
TSKU
PDZK1
CASP7
MYOG
TMEM104
NAT9
FKBP4
RARA
IER3
FLOT1
SLC25A25
NAIF1
NBPF4
STARD10
HSPB8
OSGIN1
NBPF6
ADAMTSL5
FREM2
FAM174B
PRLH
FILIP1L
PPP2R2C
SBNO2
SPINK4
SGK3
TPD52L1
RNF223
YIF1B
KCNK6
GSG1L
YBEY
MCM3AP
VASN
OVOL2
SLC22A5
TMEM229B
ST8SIA6
CDC42EP1
LGALS2
RPS6KL1
CYP1B1
CAP2
AMBP
LMAN1L
CPLX3
HAAO
SYT12
NAV2
DCAKD
SFXN2
ARL3
CHPT1
IL19
CANT1
C1QTNF1
CELSR2
MCF2L
KRT37
UBE2T
RAPGEFL1
DGKZ
PPARGC1A
ATP6AP1
DNASE1L1
HAPLN2
N4BP3
TIPARP
CDH1
TH
INS-IGF2
INS
AMZ1
NBPF1
TTC39A
DUX4
SCOC
ESR1
RET
SLC25A24
B3GNT6
BACE1
PLEKHH1
MANEAL
NHSL1
CTAG2
TFAP2C
NEMP1
NAB2
C19orf33
CCDC88C
PTPA
CRAT
KDM4B
KRT8
ARPC1B
ACOT6
FASN
MLPH
PDE4DIP
SLC9A3R1
CTBP1
SNX24
SLC7A5
HEG1
UMODL1
SRRM2
ATP8B1
TBX2
STK11
C1QTNF6
AKAP1
MYEOV
LY6E
SERPINF1
XAB2
ARMCX6
ARMCX3
MAP3K14
USP31
PDGFA
MSMB
VPS26C
FRG2C
SEC14L6
MSLN
ZNF185
CXXC5
IPPK
MYB
DOK7
C1orf162
HAUS1
ATP5F1A
FOXK1
NFKBIA
COLEC12
MAMDC4
EDF1
DHX37
BRI3BP
FST
PGLYRP2
LAMC1
CCR6
SPOP
CLIC3
SLC25A45
FRMD8
CCN5
ABCD4
SPTBN4
BLVRB
LOC102724770
DGCR6
PLIN5
LRG1
OTUD7B
ITPK1
SPATS2L
AFF1
FBP1
PADI4
ALX4
APOC3
APOA1
UPF1
VWA2
CUEDC1
CA12
MIDEAS
MICOS10-NBL1
MICOS10
EPS15L1
SLC25A47
TMEM92
RGS10
SYT8
CBWD5
CBWD3
CABLES2
ABAT
ACACB
DMRT2
CRKL
FMN1
ARHGEF18
CCDC198
KIF21A
GPRIN1
RETREG1
MRFAP1
FCGR2B
CALCR
UBALD1
MGRN1
LYPD6B
KRT19
ZNF79
PDE4C
SMTNL2
ADAM8
CTSD
NPEPPS
CTR9
INSYN1
TIFA
CELA2B
DECR1
OLFML3
LRRFIP2
NMNAT1
LZIC
AGR3
CELA2A
LONP2
ABCC11
PPP1R12B
LIMS1
ELF1
TNS1
KRT85
SEPTIN9
PRR5-ARHGAP8
PRR5
VCAN
CSAD
UGT2B15
KLK14
EREG
FUT4
FAM102A
FOXK2
SLC25A42
PSD4
KEAP1
MACC1
MAD1L1
SLC25A36
CHSY1
TLE1
GPR37L1
DNPEP
CST6
TRH
ANKH
UNKL
SERPINA1
P2RX4
BMP7
TCIRG1
NDUFS8
RCOR3
BDKRB1
GPC6
TMCC1
ATP13A3
TUBA1A
TJAP1
CFAP206
KIAA0319
CBWD6
AGPS
ASB2
MAT1A
LRRC56
HRAS
GPSM1
EDN1
NRP1
CCDC200
FRG2
MANBAL
ST3GAL4
KAT6B
SIAH2
GRIK3
IL20
HSPA4
EFHD2
SLC26A1
IDUA
C16orf74
ART1
SUSD3
RTEL1
STMN3
PRSS27
MTRNR2L1
ALDH3B1
RAB40C
PAK4
PKP3
UHRF1
MAPT
SPATC1L
WDR74
STX5
ZBTB37
KLF16
ACSS1
MIOS
MTRNR2L2
MSH3
DHFR
MAMDC2
PLCD3
ACBD4
RHOD
KAZN
EHF
TTC6
FOXA1
SLC9A3R2
ZFP36
PLEKHG2
SNAI1
GRM4
CLASP2
ADGRG1
MTRNR2L8
B4GALT1
LRP5L
COPS8
WWC1
RECQL4
MFSD3
LRRC14
CERS2
ANXA9
LATS1
CDK3
PRDX1
ARL4D
ARHGEF10L
SLC25A1
EBF4
RPS28
NDUFA7
SGCA
TPD52L2
NFIB
MFSD10
ABHD16B
YPEL2
KIF5C
RERG
CAPN12
ISYNA1
SYNPO2L
TMED8
SAMD15
ALG8
SVIL
SYNE3
HDAC11
COL23A1
CDH26
MRGPRG
FAM187A
ANKRD2
ACIN1
CBFA2T3
IL2RB
IKBKG
G6PD
ELAPOR1
C1orf194
FGR
ARAP3
SULT2B1
DSN1
PTGES
ZBTB46
RGL3
ATP6AP2
TNNI2
ZNF285
GFAP
PLEC
ETNK2
SP2
MGAT3
SEMA3B
VEPH1
SYNJ2
ZNF346
CHST8
UQCC2
PTPRN2
MUC3A
ABHD2
MYZAP
GCOM1
NIPSNAP2
FAM228B
TTC9B
CCNP
RABGEF1
DHRS3
B3GALNT1
PMF1-BGLAP
PMF1
NT5DC3
MUC1
TP53I3
SF3B6
SERPINA6
KCNIP2
EAPP
P2RY2
MAPKAPK3
CISH
PNKD
FAM214A
SVEP1
SLC35E2A
TBKBP1
PRUNE1
MINDY1
PERP
NXNL2
SLC25A19
ORAI2
TSSC4
ARID5B
LRRC58
NPIPB9
SHC2
ZBTB45
SLC27A5
GZMM
CDC34
GDF15
LOC102723996
ICOSLG
TBX1
NDRG1
PXDC1
CASTOR1
ADARB1
TFAP2A
CSF3
PLXNB1
AKNA
TUBA3D
SIDT2
SURF4
NFE2L1
TMEM210
LRRC26
CYP4F2
RGPD2
RGPD1
MTRNR2L9
NXT1
SPAAR
HRCT1
WNT16
CCNL1
SCGB3A1
MAGI3
RTN1
FOXN1
COMTD1
PHRF1
REM2
LONRF2
LOC100130520
CD300H
C17orf77
TUBA3E
SLC43A2
COX7A2L
WDR90
MCRIP2
METTL26
GZF1
EPB41L1
APTX
C20orf203
ZFYVE28
NEFH
CFAP99
DNMT3A
EIF5AL1
TST
MPST
SDC4
SHANK2
MTRNR2L10
LFNG
SLC1A5
DNAJC5B
SCARB1
ELOVL2
TTC39C
EMILIN2
DNAJA1
POLR3F
GOLM1
DZANK1
CPA6
DOT1L
ADORA1
EPN1
FIGNL2
USP17L21
USP17L20
USP17L12
RNF144A
TAX1BP1
TMEM95
KCTD11
DNM2
PCYT1A
IER5L
BOD1L2
CYP4F11
MYLK2
TMEM212
NR2F2
ARHGEF16
HK1
USP17L22
PLCB1
GRAMD1A
PTPRR
CCR7
TMEM242
UNC45B
NLE1
LEMD2
ROBO3
ERN1
KLK12
LIMS4
TXNRD1
FBXW8
PTH1R
KLK13
RPS6KA2
CDR2L
SPRY4
SPTB
USF2
TRIM48
RFX1
ELFN2
TDRD9
ATP5MPL
TAF12
FSIP1
ITGB5
OBSL1
INHA
CLCN4
ZNF710
TSEN54
CASKIN2
MFSD6
AP1B1
SLC45A4
DDX10
NLK
RIPPLY1
CLDN2
SLC37A3
RAB19
DHRS2
HNRNPL
ATXN1
FGFBP2
FAM3B
TSPEAR
KRTAP10-12
BAMBI
LPCAT1
RGS12
ACOX3
RNF170
HOOK3
GINS3
JPH2
DMPK
MAPK13
LTBP1
RNPEPL1
OSBP
DUSP28
ANKMY1
CRYAA2
CRYAA
DLG4
FRMD5
RCAN1
C3
CDC42EP3
CCDC9B
CDH18
EXT2
TBXA2R
MIDN
JUP
CALML5
TTLL6
PI4KB
MARCHF10
RHOBTB1
TBC1D14
ACADVL
DDX47
EVI5L
RALGPS2
MTRNR2L6
NT5C2
DEF6
ADCY5
NR2F6
SDC1
SLC29A1
MYMX
GPRC5A
ZBTB7A
FABP3
ABR
FAM184A
IMMP2L
PLEKHF1
BCL3
DNAJA4
ATG9B
ABCB8
UBL4A
SLC10A3
NBPF15
HSP90AB1
OAZ3
PABPC1
RGS3
HKDC1
CALHM4
ME3
DLC1
ZMYND11
APOA4
PPL
NAIP
UBE2H
SNX10
KRT13
FADD
OXT
TOM1L2
HSPB1
DRC3
MTA1
SLC6A6
NBPF12
HOMER2
EHD1
RMND5B
SIN3B
ANXA2
PRSS22
RPL13
NCAPH
ITPRIPL1
ARFGEF2
FNIP2
KLRF2
CIC
NTMT1
PDLIM2
GATAD2A
TP63
PMEPA1
ITGB2
RBM43
VWA1
TMEM88B
SSTR2
CHD9
ZNF687
TWF2
PPM1M
H4C14
H3C15
H3C14
FOXO6
C9orf50
ZNF552
PARP16
MAPKAPK5
MEF2A
PPP2R5E
PABPN1
KCNH7
PRDM4
ASCL4
SLC35E1
ASPG
POLDIP3
TPTEP2-CSNK1E
FAM234B
JARID2
H4C15
TRMT10B
LGR6
SHCBP1L
ZNF385B
ATP4A
FARSB
FUT7
CST9
C9orf139
ABCA2
SLC37A1
TRPM7
ZBTB7B
RABL6
CCDC183
USP17L13
RGS19
OPRL1
LKAAEAR1
ZNF746
TSPAN5
BHLHE40
RAI14
PCIF1
FBH1
ANKRD16
PAX9
EOLA1
IL1F10
TMEM147
HSFX3
TPBG
ZSWIM6
CRK
BAIAP3
CDH11
PTP4A2
CAND1
ZNRF2
NPIPA3
NPIPA2
AMOTL2
ARHGAP29
PTMA
TEX36
ATG16L2
NDRG4
B3GNT3
SETD2
ENTPD8
PALLD
PLA2G10
PAQR5
STC2
HSFX4
EOLA2
PGF
H2AC19
H2AC18
HUWE1
ABCA3
TMEM107
EPPK1
RASEF
SH3GLB2
MIGA2
PADI3
MTUS1
LARGE1
SULT1A4
SULT1A3
FUS
FYB2
SPATA9
RHOBTB3
TNK2
GLRX5
ZNFX1
PDCD6IP
AFAP1
MERTK
ZMYND8
SLC2A12
ATF4
CIB2
RAB31
ABCD3
RPEL1
TJP3
SIRT4
ANKHD1-EIF4EBP3
ANKHD1
ASS1
SH3YL1
ACP1
TKTL2
FECH
ADCY9
NPIPB6
SLC25A41
KHSRP
OPN4
CNOT3
DNMBP
CPN2
SART3
ISCU
ETV4
KLF10
MICAL3
CPNE6
CARMIL3
USP17L17
USP17L15
UNC5B
S100P
RBBP5
LSMEM2
B2M
USP17L11
PRSS23
PEX10
BATF
PAX4
PKIB
MYBPH
HASPIN
CYB561
LENG1
ADD3
KIF2C
ENHO
LCMT1
GPR153
COL26A1
ANAPC7
NUP85
GJD3
BTNL9
ZNF229
TTC21B
ZNHIT2
TM7SF2
H2BC5
H1-4
INAVA
LHX4
ESRP2
SLC16A3
JUNB
MIEF1
SASH3
USP17L18
KLRC3
EXOSC5
BCKDHA
A4GALT
SRSF7
H4C9
TCF21
CACNA1H
HID1
ARPIN-AP3S2
ARPIN
MAB21L4
TRAF7
RPS29
RAB26
GPD1L
MOCS1
MEIS1
LAMB2
CSK
ANGEL1
TBC1D16
GAGE2A
SH3BGR
LCA5L
DLL3
SLC19A1
ACBD6
GTF2B
AZGP1
ENKUR
DYSF
ZBTB5
HOXC6
HOXC5
CD22
H4C12
H4C11
SMAD3
UBE2I
TGIF1
KCNK7
C19orf48
ATP5MG
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
NCOA3
RAB5B
PMEL
HRK
CDK2
UFM1
TRIM2
SPINK13
IMPA2
CACNB2
MACROD1
USP17L10
PRSS8
PNO1
SF3B3
COG4
FBN1
ZNF91
AHCYL1
IRF2BPL
UBE2L3
MYH11
HSH2D
GAA
PHF13
KLHL21
ZBTB42
AKT1
BMP4
ZNF576
IRGQ
GOSR2
TOMM40
PSMD12
TTC28
MRPS7
MIF4GD
GGA3
UPK3A
SH2D3C
DDIT4
DCLK1
ZFP37
H4C3
H1-6
ZNF654
CGGBP1
TSN
PCNX3
MAP3K11
SBSPON
SLC11A2
ITGB3
RAD23A
H2BC14
H2AC14
CALR
SEMA4G
SCIN
H2BC15
H2AC15
C1orf198
PCTP
NVL
NNAT
CASZ1
BLCAP
ZNF335
ZRANB2
GHRH
EEF1A1
PPP2R3A
IVD
SULT1A1
EIF3E
RXRA
RPS27
RAB13
KCTD1
ID1
SP1