ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9932062 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◢ SRX017710: CD4+ T cells

◢ SRX5090184: GM12878

◢ SRX10475642: Hep G2

◢ SRX10475643: Hep G2

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◣ SRX9932062: MCF-7

◢ SRX9932063: MCF-7

◢ SRX9932064: MCF-7

◢ SRX9932065: MCF-7

◢ SRX9932066: MCF-7

◢ SRX9932067: MCF-7

◢ SRX9932068: MCF-7

◢ SRX9932069: MCF-7

◢ SRX9932070: MCF-7

◢ SRX9932071: MCF-7

◢ SRX9932072: MCF-7

◢ SRX9932073: MCF-7

◢ SRX9932074: MCF-7

◢ SRX9932075: MCF-7

◢ SRX9932076: MCF-7

◢ SRX9932077: MCF-7

◢ SRX23330419: MDA-MB-231

◢ SRX23330420: MDA-MB-231

◢ SRX23330421: MDA-MB-231

◢ SRX23330422: MDA-MB-231

◢ SRX23330424: MDA-MB-231

◢ SRX23330425: MDA-MB-231

◢ HDAC6: STRING

GREB1
TFF1
IGFBP4
TMIGD3
ADORA3
PDZK1
IL24
TMEM104
NAT9
PARD6B
CASP7
MYOG
NBPF4
IER3
FLOT1
TSKU
RARA
NBPF6
FKBP4
SLC25A25
NAIF1
FAM174B
OSGIN1
STARD10
SBNO2
FILIP1L
HSPB8
PRLH
VASN
FREM2
ADAMTSL5
SPINK4
PPP2R2C
AMBP
OVOL2
SLC22A5
LMAN1L
CPLX3
CDC42EP1
LGALS2
TPD52L1
DGKZ
SGK3
GSG1L
YIF1B
KCNK6
RNF223
DCAKD
RPS6KL1
ATP6AP1
DNASE1L1
CHPT1
ST8SIA6
UBE2T
CDH1
RAPGEFL1
PTPA
CRAT
CAP2
TMEM229B
TTC39A
CYP1B1
NAV2
CANT1
C1QTNF1
CELSR2
BACE1
YBEY
MCM3AP
SLC25A24
N4BP3
SCOC
TH
INS-IGF2
INS
AMZ1
CCDC88C
SLC9A3R1
MLPH
SYT12
KRT37
SFXN2
ARL3
PLEKHH1
TIPARP
IL19
HAAO
ARPC1B
PPARGC1A
AKAP1
PDE4DIP
RET
ACOT6
GPRIN1
NHSL1
NBPF1
HEG1
UPF1
HAUS1
ATP5F1A
MYB
RGS10
XAB2
KDM4B
DUX4
SRRM2
ATP8B1
KRT8
FASN
C1QTNF6
SNX24
C19orf33
ARMCX6
ARMCX3
USP31
TMEM92
SERPINF1
DMRT2
MSMB
CXXC5
TFAP2C
APOC3
APOA1
PDGFA
LAMC1
MANEAL
ESR1
NEMP1
NAB2
ITPK1
MYEOV
GPR37L1
ZNF185
MCF2L
B3GNT6
FBP1
MAP3K14
FOXK1
BMP7
CABLES2
SLC7A5
LY6E
KIF21A
CTBP1
CTAG2
EHF
HAPLN2
PADI4
SMTNL2
UMODL1
SPTBN4
BLVRB
NFKBIA
TBX2
MAPT
STK11
IPPK
PGLYRP2
SLC25A45
FRMD8
KEAP1
FAM102A
CELA2A
YPEL2
LYPD6B
MIDEAS
SERPINA1
PLIN5
LRG1
DOK7
ABCD4
LONP2
ABCC11
C1orf162
ADAM8
OTUD7B
DECR1
CELA2B
AFF1
CCR6
MSLN
LOC102724770
DGCR6
SEC14L6
UHRF1
FST
NFIB
DNPEP
VPS26C
TIFA
BDKRB1
MAMDC4
EDF1
CCN5
DHX37
BRI3BP
EPS15L1
KRT85
ABAT
ARHGEF18
ZNF79
EREG
CST6
SPATS2L
OLFML3
FRG2C
MRFAP1
FCGR2B
KLK14
MACC1
LRRFIP2
ALX4
PTGES
CCDC198
ACACB
SEPTIN9
KLF16
CBWD5
CBWD3
CBWD6
TMED8
SAMD15
SYT8
COLEC12
MIOS
GRIK3
CA12
TMCC1
IKBKG
G6PD
CLIC3
CUEDC1
RERG
CRKL
UNKL
ALG8
LRRC56
HRAS
ACSS1
ELAPOR1
C1orf194
FMN1
NPEPPS
ZBTB37
TJAP1
KAZN
VWA2
SLC25A47
UGT2B15
MAD1L1
KRT19
ARHGEF10L
CDH26
SPOP
FOXK2
CSAD
LATS1
RAB40C
SLC25A42
PLCD3
ACBD4
PRDX1
NDRG1
CALCR
CTR9
ANKH
C16orf74
KIAA0319
LRP5L
LOC102723996
ICOSLG
SNAI1
UQCC2
KAT6B
GPC6
VEPH1
PKP3
TUBA1A
ANKRD2
ABHD2
EFHD2
NT5DC3
ELF1
B4GALT1
MRGPRG
SLC25A36
FAM187A
GFAP
FUT4
CPA6
NMNAT1
LZIC
FGR
TBKBP1
RCOR3
CERS2
ANXA9
GPSM1
TCIRG1
NDUFS8
MAGI3
SGCA
PAK4
INSYN1
EBF4
PPP1R12B
SHANK2
JPH2
PSD4
ISYNA1
SIAH2
TNS1
ZNF346
VCAN
PLEC
SLC26A1
IDUA
AGR3
SVIL
TLE1
RHOD
PRR5-ARHGAP8
PRR5
COPS8
TNNI2
CCNL1
TPD52L2
ABHD16B
ADGRG1
CYP4F2
MANBAL
TMEM212
RIPPLY1
CLDN2
ATP13A3
CAPN12
LRRC58
MARCHF10
ERN1
ALDH3B1
GRAMD1A
ETNK2
AGPS
DSN1
WWC1
NPIPB9
PXDC1
PTPRR
BAMBI
CTSD
CHSY1
ATP6AP2
TFAP2A
PDE4C
CDK3
ART1
ARAP3
DNAJC5B
RPS28
NDUFA7
HDAC11
ELOVL2
TTC6
FOXA1
SYNPO2L
PERP
TSPEAR
KRTAP10-12
MICOS10-NBL1
MICOS10
TRH
COMTD1
FAM214A
CBFA2T3
RETREG1
PLEKHF1
SLC25A1
CHST8
NIPSNAP2
SERPINA6
PNKD
P2RY2
PRUNE1
MINDY1
MFSD10
SYNE3
SLC45A4
C20orf203
RHOBTB1
SLC9A3R2
MGAT3
SIDT2
MAT1A
COX7A2L
ZFP36
PLEKHG2
FAM228B
TP53I3
SF3B6
NXNL2
TTC9B
CCNP
TST
MPST
IL2RB
ORAI2
SULT2B1
TSSC4
ADORA1
RGS12
DHRS2
SYNJ2
CYP4F11
SHC2
REM2
KLK13
RGL3
B3GALNT1
RPS6KA2
SLC43A2
GOLM1
HK1
KLK12
SVEP1
NXT1
GZF1
APOA4
DHRS3
FGFBP2
MYZAP
GCOM1
ADARB1
ZNF710
DNAJA4
LIMS1
SURF4
MFSD6
SLC35E2A
NR2F2
SLC2A12
IL20
FAM184A
KLRF2
MTRNR2L1
GRM4
GZMM
CDC34
SDC4
CDH18
IER5L
ME3
NPIPA3
NPIPA2
PLA2G10
EDN1
GDF15
HASPIN
AZGP1
RBM43
EIF5AL1
LONRF2
NRP1
PPP2R5E
FSIP1
PAQR5
TUBA3D
PCYT1A
KRT13
SLC37A3
RAB19
GINS3
LOC100130520
CD300H
C17orf77
TMEM95
KCTD11
PTH1R
TWF2
PPM1M
PLCB1
LIMS4
NBPF12
HUWE1
TAFA5
CALHM4
PKIB
FRG2
CASTOR1
SPRY4
DNMBP
EXT2
ST3GAL4
ASPG
SLC19A1
ZMYND11
HOMER2
FIGNL2
ADCY5
SSTR2
PALLD
MERTK
ARID5B
ENTPD8
CFAP206
SUN5
BPIFB2
SPATC1L
WDR74
STX5
CCDC200
MTRNR2L2
MSH3
DHFR
MAMDC2
CLASP2
MTRNR2L8
RECQL4
MFSD3
LRRC14
ARL4D
KIF5C
ASB2
COL23A1
ACIN1
ZBTB46
ZNF285
SP2
SEMA3B
PTPRN2
MUC3A
RABGEF1
PMF1-BGLAP
PMF1
MUC1
KCNIP2
EAPP
MAPKAPK3
CISH
UBALD1
MGRN1
SLC25A19
ZBTB45
SLC27A5
PRSS27
TBX1
CSF3
PLXNB1
AKNA
NFE2L1
TMEM210
LRRC26
RGPD2
RGPD1
MTRNR2L9
SPAAR
HRCT1
WNT16
SCGB3A1
SUSD3
RTN1
FOXN1
PHRF1
TUBA3E
WDR90
MCRIP2
METTL26
EPB41L1
APTX
RTEL1
ZFYVE28
NEFH
CFAP99
DNMT3A
MTRNR2L10
LFNG
SLC1A5
SCARB1
TTC39C
EMILIN2
DNAJA1
POLR3F
DZANK1
DOT1L
EPN1
USP17L21
USP17L20
USP17L12
RNF144A
TAX1BP1
DNM2
STMN3
BOD1L2
MYLK2
ARHGEF16
USP17L22
CCR7
TMEM242
UNC45B
NLE1
LEMD2
ROBO3
TXNRD1
FBXW8
HSPA4
CDR2L
SPTB
USF2
TRIM48
RFX1
ELFN2
TDRD9
ATP5MPL
TAF12
ITGB5
OBSL1
INHA
CLCN4
TSEN54
CASKIN2
AP1B1
DDX10
NLK
HNRNPL
ATXN1
FAM3B
LPCAT1
ACOX3
RNF170
HOOK3
DMPK
MAPK13
LTBP1
RNPEPL1
OSBP
DUSP28
ANKMY1
CRYAA2
CRYAA
DLG4
FRMD5
RCAN1
C3
CDC42EP3
CCDC9B
TBXA2R
MIDN
JUP
CALML5
TTLL6
PI4KB
P2RX4
TBC1D14
ACADVL
DDX47
EVI5L
RALGPS2
MTRNR2L6
NT5C2
DEF6
NR2F6
SDC1
SLC29A1
MYMX
GPRC5A
ZBTB7A
FABP3
ABR
IMMP2L
BCL3
ATG9B
ABCB8
UBL4A
SLC10A3
NBPF15
HSP90AB1
OAZ3
PABPC1
RGS3
HKDC1
DLC1
PPL
NAIP
UBE2H
SNX10
FADD
OXT
TOM1L2
HSPB1
DRC3
MTA1
SLC6A6
EHD1
RMND5B
SIN3B
ANXA2
PRSS22
RPL13
NCAPH
ITPRIPL1
ARFGEF2
FNIP2
CIC
NTMT1
PDLIM2
GATAD2A
TP63
PMEPA1
ITGB2
VWA1
TMEM88B
CHD9
ZNF687
H4C14
H3C15
H3C14
FOXO6
C9orf50
ZNF552
PARP16
MAPKAPK5
MEF2A
PABPN1
KCNH7
PRDM4
ASCL4
SLC35E1
POLDIP3
TPTEP2-CSNK1E
FAM234B
JARID2
H4C15
TRMT10B
LGR6
SHCBP1L
ZNF385B
ATP4A
FARSB
FUT7
CST9
C9orf139
ABCA2
SLC37A1
TRPM7
ZBTB7B
RABL6
CCDC183
USP17L13
RGS19
OPRL1
LKAAEAR1
ZNF746
TSPAN5
BHLHE40
RAI14
PCIF1
FBH1
ANKRD16
PAX9
EOLA1
IL1F10
TMEM147
HSFX3
TPBG
ZSWIM6
CRK
BAIAP3
CDH11
PTP4A2
CAND1
ZNRF2
AMOTL2
ARHGAP29
PTMA
TEX36
ATG16L2
NDRG4
B3GNT3
SETD2
STC2
HSFX4
EOLA2
PGF
H2AC19
H2AC18
ABCA3
TMEM107
EPPK1
RASEF
SH3GLB2
MIGA2
PADI3
MTUS1
LARGE1
SULT1A4
SULT1A3
FUS
FYB2
SPATA9
RHOBTB3
TNK2
GLRX5
ZNFX1
PDCD6IP
AFAP1
ZMYND8
ATF4
CIB2
RAB31
ABCD3
RPEL1
TJP3
SIRT4
ANKHD1-EIF4EBP3
ANKHD1
ASS1
SH3YL1
ACP1
TKTL2
FECH
ADCY9
NPIPB6
SLC25A41
KHSRP
OPN4
CNOT3
CPN2
SART3
ISCU
ETV4
KLF10
MICAL3
CPNE6
CARMIL3
USP17L17
USP17L15
UNC5B
S100P
RBBP5
LSMEM2
B2M
USP17L11
PRSS23
PEX10
BATF
PAX4
MYBPH
CYB561
LENG1
ADD3
KIF2C
ENHO
LCMT1
GPR153
COL26A1
ANAPC7
NUP85
GJD3
BTNL9
ZNF229
TTC21B
ZNHIT2
TM7SF2
H2BC5
H1-4
INAVA
LHX4
ESRP2
SLC16A3
JUNB
MIEF1
SASH3
USP17L18
KLRC3
EXOSC5
BCKDHA
A4GALT
SRSF7
H4C9
TCF21
CACNA1H
HID1
ARPIN-AP3S2
ARPIN
MAB21L4
TRAF7
RPS29
RAB26
GPD1L
MOCS1
MEIS1
LAMB2
CSK
ANGEL1
TBC1D16
GAGE2A
SH3BGR
LCA5L
DLL3
ACBD6
GTF2B
ENKUR
DYSF
ZBTB5
HOXC6
HOXC5
CD22
H4C12
H4C11
SMAD3
UBE2I
TGIF1
KCNK7
C19orf48
ATP5MG
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
NCOA3
RAB5B
PMEL
HRK
CDK2
UFM1
TRIM2
SPINK13
IMPA2
CACNB2
MACROD1
USP17L10
PRSS8
PNO1
SF3B3
COG4
FBN1
ZNF91
AHCYL1
IRF2BPL
UBE2L3
MYH11
HSH2D
GAA
PHF13
KLHL21
ZBTB42
AKT1
BMP4
ZNF576
IRGQ
GOSR2
TOMM40
PSMD12
TTC28
MRPS7
MIF4GD
GGA3
UPK3A
SH2D3C
DDIT4
DCLK1
ZFP37
H4C3
H1-6
ZNF654
CGGBP1
TSN
PCNX3
MAP3K11
SBSPON
SLC11A2
ITGB3
RAD23A
H2BC14
H2AC14
CALR
SEMA4G
SCIN
H2BC15
H2AC15
C1orf198
PCTP
NVL
NNAT
CASZ1
BLCAP
ZNF335
ZRANB2
GHRH
EEF1A1
PPP2R3A
IVD
SULT1A1
EIF3E
RXRA
RPS27
RAB13