ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9932065 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◢ SRX017710: CD4+ T cells

◢ SRX5090184: GM12878

◢ SRX10475642: Hep G2

◢ SRX10475643: Hep G2

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◢ SRX9932062: MCF-7

◢ SRX9932063: MCF-7

◢ SRX9932064: MCF-7

◣ SRX9932065: MCF-7

◢ SRX9932066: MCF-7

◢ SRX9932067: MCF-7

◢ SRX9932068: MCF-7

◢ SRX9932069: MCF-7

◢ SRX9932070: MCF-7

◢ SRX9932071: MCF-7

◢ SRX9932072: MCF-7

◢ SRX9932073: MCF-7

◢ SRX9932074: MCF-7

◢ SRX9932075: MCF-7

◢ SRX9932076: MCF-7

◢ SRX9932077: MCF-7

◢ SRX23330419: MDA-MB-231

◢ SRX23330420: MDA-MB-231

◢ SRX23330421: MDA-MB-231

◢ SRX23330422: MDA-MB-231

◢ SRX23330424: MDA-MB-231

◢ SRX23330425: MDA-MB-231

◢ HDAC6: STRING

IGFBP4
GREB1
TFF1
TMIGD3
ADORA3
TMEM104
NAT9
RARA
IL24
PDZK1
MYOG
TSKU
IER3
FLOT1
CASP7
FKBP4
SLC25A25
NAIF1
STARD10
OSGIN1
PRLH
FILIP1L
HSPB8
FAM174B
FREM2
PPP2R2C
NBPF4
SBNO2
SPINK4
RNF223
VASN
OVOL2
TPD52L1
PARD6B
NBPF6
LMAN1L
CPLX3
ADAMTSL5
AMBP
SGK3
SLC22A5
GSG1L
DGKZ
DCAKD
CAP2
CDH1
TMEM229B
CDC42EP1
LGALS2
YIF1B
KCNK6
ST8SIA6
CYP1B1
SYT12
ATP6AP1
DNASE1L1
RAPGEFL1
CELSR2
RPS6KL1
NAV2
NBPF1
UBE2T
CHPT1
SLC9A3R1
MLPH
TTC39A
PLEKHH1
RET
KRT8
CCDC88C
PPARGC1A
KRT37
SFXN2
ARL3
SCOC
KDM4B
AMZ1
NHSL1
TH
INS-IGF2
INS
PTPA
CRAT
HAAO
CANT1
C1QTNF1
N4BP3
HEG1
TMEM92
IL19
TIPARP
BACE1
MYB
XAB2
MSMB
DUX4
FASN
ARPC1B
ARMCX6
ARMCX3
C19orf33
MANEAL
HAPLN2
SLC25A24
NFKBIA
MYEOV
B3GNT6
PDGFA
ITPK1
CXXC5
ZNF185
SNX24
AKAP1
GPRIN1
LY6E
USP31
UPF1
FOXK1
SLC7A5
ACOT6
ESR1
RGS10
MRFAP1
NEMP1
NAB2
PDE4DIP
MAP3K14
SRRM2
FRG2C
TFAP2C
HAUS1
ATP5F1A
YBEY
MCM3AP
SEC14L6
C1QTNF6
APOC3
APOA1
SERPINF1
ATP8B1
TBX2
OTUD7B
SMTNL2
LOC102724770
DGCR6
DMRT2
MIDEAS
EHF
STK11
DECR1
FMN1
LRRFIP2
SLC25A45
FRMD8
CCN5
AFF1
KEAP1
LAMC1
SPOP
UMODL1
CTAG2
IPPK
GPR37L1
COLEC12
MAPT
TJAP1
FAM102A
SPTBN4
BLVRB
MCF2L
PGLYRP2
KRT85
ADAM8
PLIN5
LRG1
MSLN
FBP1
CELA2A
DOK7
DNPEP
VWA2
SEPTIN9
TTC6
FOXA1
PADI4
CSAD
ABCD4
VPS26C
CUEDC1
KIF21A
ZNF79
UHRF1
KAT6B
FST
BDKRB1
ABAT
KRT19
ACACB
CRKL
PAK4
NPEPPS
UGT2B15
FCGR2B
CLIC3
ARHGEF18
CELA2B
INSYN1
C16orf74
LONP2
ABCC11
MAMDC4
EDF1
RAB40C
KLK14
SLC25A47
BMP7
TLE1
CALCR
RCOR3
UNKL
SLC25A42
TIFA
DHX37
BRI3BP
CTBP1
SERPINA1
CBWD5
CBWD3
CBWD6
ALX4
CABLES2
MACC1
EREG
GRIK3
IKBKG
G6PD
EPS15L1
ELF1
C1orf162
CCR6
CTSD
AGR3
LYPD6B
SLC25A36
UQCC2
NFIB
YPEL2
ARHGEF10L
ALDH3B1
FUT4
ABHD2
KIAA0319
SCGB3A1
FRG2
CA12
FOXK2
PLCD3
ACBD4
SPATS2L
NT5DC3
SVIL
ACSS1
SYT8
TTC9B
CCNP
TBKBP1
RERG
MAD1L1
ZFP36
PLEKHG2
CHSY1
EBF4
MIOS
CDH26
LRP5L
TRH
SVEP1
LATS1
OLFML3
SULT2B1
SYNE3
ADGRG1
ETNK2
SLC35E2A
MRGPRG
TMED8
SAMD15
SIDT2
PSD4
ZBTB37
CCDC198
VCAN
TNNI2
SYNJ2
CFAP206
CST6
PRR5-ARHGAP8
PRR5
MAPKAPK3
CISH
NMNAT1
LZIC
ST3GAL4
MYZAP
GCOM1
GRM4
TMCC1
NXNL2
BAMBI
ISYNA1
TUBA1A
ELAPOR1
C1orf194
MANBAL
CYP4F2
EFHD2
RHOD
LRRC56
HRAS
ANKH
HDAC11
ARID5B
MAT1A
KLF16
WWC1
ADARB1
MAGI3
SLC1A5
COPS8
TNS1
TXNRD1
C20orf203
PTGES
TPD52L2
ABHD16B
DNAJC5B
LOC102723996
ICOSLG
SLC45A4
ZNF346
SLC43A2
ACOX3
SIAH2
GDF15
SGCA
SYNPO2L
SCARB1
LIMS1
NDRG1
VEPH1
PRSS27
TSSC4
TFAP2A
ANKRD2
CLASP2
CPA6
MICOS10-NBL1
MICOS10
CERS2
ANXA9
FOXN1
CDC42EP3
PDE4C
FAM187A
GFAP
CCNL1
CDK3
EPB41L1
TMEM212
ART1
ATP13A3
LONRF2
SDC4
IL2RB
PKP3
PRDX1
AGPS
ADORA1
TMEM210
LRRC26
PPP1R12B
SHANK2
CHST8
TSPEAR
KRTAP10-12
TCIRG1
NDUFS8
PERP
FAM184A
ELOVL2
HSPA4
MUC1
FGR
NIPSNAP2
CTR9
CCDC200
PLEC
CST9
FAM214A
ASB2
EDN1
ARAP3
GPSM1
KAZN
RPS6KA2
CBFA2T3
RETREG1
CYP4F11
LFNG
KLK13
MGAT3
SSTR2
ZNF285
SLC25A1
FAM228B
TP53I3
SF3B6
FAM3B
P2RY2
RTN1
TMEM95
KCTD11
ATP6AP2
NR2F2
CCR7
B4GALT1
PXDC1
DSN1
MARCHF10
APOA4
GPC6
REM2
SURF4
HK1
CASTOR1
RGS3
TTC39C
FSIP1
LOC100130520
CD300H
C17orf77
SPRY4
CCDC9B
ZSWIM6
GOLM1
DHRS2
RHOBTB1
ADCY5
ME3
EIF5AL1
COMTD1
TWF2
PPM1M
RNF144A
DHRS3
PCYT1A
RALGPS2
B3GALNT1
PTPRR
LIMS4
TBX1
ARHGAP29
SNAI1
LRRC58
COX7A2L
TUBA3D
CACNA1H
ALG8
TPBG
TBXA2R
CAPN12
ZMYND8
JARID2
MERTK
ARFGEF2
CSF3
PRUNE1
MINDY1
CDR2L
SUSD3
SLC26A1
IDUA
UBE2H
FRMD5
ETV4
ENHO
SLC6A6
PRDM4
ASCL4
SLC9A3R2
ZFYVE28
CFAP99
BOD1L2
MFSD6
ATG9B
ABCB8
MYLK2
GINS3
NBPF15
B3GNT3
PNKD
TSPAN5
IER5L
IL20
NT5C2
KCNH7
FIGNL2
PAQR5
KLK12
GPRC5A
FAM234B
ACIN1
ABCA3
AKNA
GZMM
CDC34
GRAMD1A
RECQL4
MFSD3
LRRC14
UBALD1
MGRN1
PLCB1
NBPF12
ITGB2
TPTEP2-CSNK1E
NXT1
GZF1
JUP
ZNF385B
CDH18
SNX10
KRT24
ARL4D
SPTB
RIPPLY1
CLDN2
TBC1D14
EOLA1
HSFX4
EOLA2
HUWE1
A4GALT
MFSD10
HSFX3
HSPB1
ZNF552
TEX36
OVOL1
AP5B1
NRP1
PLXNB1
TDRD9
ATP5MPL
PAX9
FGFBP2
ZNRF2
DOT1L
UBL4A
SLC10A3
ENTPD8
SLC2A12
AP1B1
ROBO3
PTH1R
RGL3
RTEL1
STMN3
SHCBP1L
IL17RB
CHDH
SERPINA6
BATF
JPH2
P2RX4
MTRNR2L1
HOXC6
HOXC5
DCLK1
SBSPON
LPCAT1
DLC1
RMND5B
NPIPB9
NEFH
RGS12
RCAN1
SDC1
EHD1
FYB2
KLF10
KLRF2
ARPIN-AP3S2
ARPIN
PSCA
JRK
PLEKHF1
ZFP36L1
WNT16
TTLL6
TP63
OBSL1
INHA
ESRP2
SLC37A3
RAB19
DNMBP
RABGEF1
TAX1BP1
EPPK1
MYBPH
TCF21
SCD
TSC22D3
CHD9
CPNE6
CARMIL3
CYB561
WNT4
NUDT9
BCL3
SLC25A19
HOMER2
PPL
NCAPH
ITPRIPL1
PPP2R5E
CLCN4
CHGA
ADD3
PKM
FNIP2
NPIPA3
NPIPA2
PLA2G10
LARGE1
USF2
PTMA
PRSS8
ORAI2
DNMT3A
TSEN54
CASKIN2
DDX47
PRSS22
MEF2A
CALML5
MT2A
SLC29A1
MYMX
NCOA3
TOB1
SLC11A2
ZBTB46
PTPRN2
FBXW8
DNAJA4
ELFN2
CAND1
RAB31
LHX4
SLC16A3
SBSN
GAPDHS
ERN1
MIDN
SH3BGR
LCA5L
BAIAP3
MAPK13
CCDC149
RNF170
HOOK3
CSK
PALLD
PKIB
UPK3A
SHC2
ANXA2
UBE2I
NUDC
NR0B2
SYNGR1
ZBTB7A
PRSS23
ATXN1
RAI14
RPEL1
MOCS1
GHRH
TNK2
TKTL2
CAPN13
ZNF710
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
HKDC1
RXRA
TLE3
SLC26A2
PDE6A
SEC14L5
PADI3
ZNF436
SEMA3B
ABR
RBM43
TJP3
TGIF1
DDIT4
ARRB1
PGF
HTRA3
LENG1
GPD1L
BMP4
BHLHE40
BASP1
RPS28
NDUFA7
PTP4A2
SASH3
TANGO2
ARVCF
SH3YL1
ACP1
PDHX
APIP
ELF3
IMMP2L
DDX10
PRSS56
SEC14L2
RNF215
UGT2B17
MCIDAS
CCNO
PPFIBP2
CALHM4
PIEZO2
TTC28
INAVA
CCDC170
TUBA3E
MTUS1
ABCD3
HP1BP3
ATP5PO
ZNF703
GET4
FRAT2
DGLUCY
VIT
RP1
KIFBP
S100A10
SEMA3F
TMEM220
SCIN
SPATC1L
WDR74
STX5
MTRNR2L2
MSH3
DHFR
MAMDC2
MTRNR2L8
KIF5C
COL23A1
SP2
MUC3A
PMF1-BGLAP
PMF1
KCNIP2
EAPP
ZBTB45
SLC27A5
NFE2L1
RGPD2
RGPD1
MTRNR2L9
SPAAR
HRCT1
PHRF1
WDR90
MCRIP2
METTL26
APTX
TST
MPST
MTRNR2L10
EMILIN2
DNAJA1
POLR3F
DZANK1
EPN1
USP17L21
USP17L20
USP17L12
DNM2
ARHGEF16
USP17L22
TMEM242
UNC45B
NLE1
LEMD2
TRIM48
RFX1
TAF12
ITGB5
NLK
HNRNPL
DMPK
LTBP1
RNPEPL1
OSBP
DUSP28
ANKMY1
CRYAA2
CRYAA
DLG4
C3
EXT2
PI4KB
ACADVL
EVI5L
MTRNR2L6
DEF6
NR2F6
FABP3
HSP90AB1
OAZ3
PABPC1
ZMYND11
NAIP
KRT13
FADD
OXT
TOM1L2
DRC3
MTA1
SIN3B
RPL13
CIC
NTMT1
PDLIM2
GATAD2A
PMEPA1
VWA1
TMEM88B
ZNF687
H4C14
H3C15
H3C14
FOXO6
C9orf50
PARP16
MAPKAPK5
PABPN1
SLC35E1
ASPG
POLDIP3
H4C15
TRMT10B
LGR6
ATP4A
FARSB
FUT7
C9orf139
ABCA2
SLC37A1
TRPM7
ZBTB7B
RABL6
CCDC183
USP17L13
RGS19
OPRL1
LKAAEAR1
ZNF746
PCIF1
FBH1
ANKRD16
IL1F10
TMEM147
CRK
CDH11
AMOTL2
ATG16L2
NDRG4
SETD2
STC2
H2AC19
H2AC18
TMEM107
RASEF
SH3GLB2
MIGA2
SULT1A4
SULT1A3
FUS
SPATA9
RHOBTB3
GLRX5
ZNFX1
PDCD6IP
AFAP1
ATF4
CIB2
SIRT4
ANKHD1-EIF4EBP3
ANKHD1
ASS1
FECH
ADCY9
NPIPB6
SLC25A41
KHSRP
OPN4
CNOT3
CPN2
SART3
ISCU
MICAL3
USP17L17
USP17L15
UNC5B
S100P
RBBP5
LSMEM2
B2M
USP17L11
PEX10
PAX4
HASPIN
KIF2C
LCMT1
GPR153
COL26A1
ANAPC7
NUP85
GJD3
BTNL9
ZNF229
TTC21B
ZNHIT2
TM7SF2
H2BC5
H1-4
JUNB
MIEF1
USP17L18
KLRC3
EXOSC5
BCKDHA
SRSF7
H4C9
HID1
MAB21L4
TRAF7
RPS29
RAB26
MEIS1
LAMB2
ANGEL1
TBC1D16
GAGE2A
DLL3
SLC19A1
ACBD6
GTF2B
AZGP1
ENKUR
DYSF
ZBTB5
CD22
H4C12
H4C11
SMAD3
KCNK7
C19orf48
ATP5MG
RAB5B
PMEL
HRK
CDK2
UFM1
TRIM2
SPINK13
IMPA2
CACNB2
MACROD1
USP17L10
PNO1