ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX12142046 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◢ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◢ SRX7546913: ES cells

◢ SRX7546914: ES cells

◢ SRX823607: ES cells

◣ SRX12142046: mESCs, differentiated

◢ SRX12142051: mESCs, differentiated

◢ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◢ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Alg14
Gatad2a
Cd38
Eno1
Atrn
Zfp964
Snrnp70
Smc6
Gen1
Cul5
Pabpc1
Enpp4
Ufsp1
Letmd1
Pitx3
Mkx
Colec12
Man2a2
Irgm1
Ywhae
Tbc1d5
Zcrb1
Pphln1
Donson
Gid4
Prelid3a
Znrf1
Wipi2
Apc
Mllt10
Pacsin2
Ints9
Hmbox1
Pou5f1
Itm2b
Mphosph8
Grb2
Rbm47
Coro2a
Tmed7
Eif1a
Chd1
Notch2
Cep70
Plcxd1
Spata24
Fbxl7
Qpct
Pxdc1
Ptprz1
Prdm4
Faim
Polg2
Slc37a3
Pdcd2
Lama1
Lrrn4
Oga
Tagln3
Nkiras2
Wsb2
Trabd
E030030I06Rik
H1f2
Fbxo5
Zfp9
Efemp1
Coq2
Slc6a16
Slc12a4
Ubtf
Arfgef1
Cfap300
Pdia3
Catsper2
H2-DMa
Brd2
Apbb2
Asxl1
Sema6a
Abl2
Ddx20
Usp13
Ralb
Sfxn2
Arl3
Adnp2
Golm2
Zdhhc6
Vti1a
Klf5
Nsrp1
Msc
Tsga10
Coil
Flywch1
Wdr59
H3c13
H2bc18
Mterf1b
Ddah2
Ppp2ca
Lefty1
Mterf1a
Exoc6b
Sbk1
Atxn3
Coq8b
Ptpra
Reep2
Tmco4
Kif5c
Mbd3
Mios
B3gnt7
Nudt1
Sptb
Trim33
Dmtn
App
Tmem161a
Naa16
Rnf125
Klhl1
Gdpgp1
Cib1
Arl2
Nbea
Mapre2
Glul
Tmem62
Zbtb25
Zbtb1
Ndrg1
Prkag1
Rnf8
Ednrb
Marchf7
Sh3rf1
2300009A05Rik
Zfp36
Smad7
Mmp25
Tapbp
Rmi1
Hnrnpk
Garre1
Kcnn2
Arid3c
Kcnab3
Cox5a
Hmga1b
Hmga1
Tmc7
Vezt
Fgd6
Hif3a
Gjc1
Neil1
Pou2f1
Zfp868
Mpped2
Arap2
Pald1
Klhdc8b
Ccdc71
Slc16a9
Ccdc60
H3c15
H3c14
Myo10
Usp32
Arhgap32
AU022252
P3h1
Pgrmc2
Mnx1
Chrac1
Mapk4
Slco5a1
Tbc1d9
P3h2
Phlpp2
Scd1
Mapk3
Pde3a
Phc2
Prickle1
Prmt9
Ccdc30
B3gnt4
Ifitm1
Kdm2b
Ncdn
AU040320
Fam227b
Dtwd1
Abr
Cerkl
Ptch2
Tmem63b
Mrpl14
Apoe
Ppp3cb
Pvr
Msh6
Usp37
Cnot9
Lrrc8d
Slc35f2
Ptdss2
Zfp64
Pdxdc1
Mpv17l
Hivep2
Asap2
Rpp14
Htd2
Fads1
H3f3a
Smad4
Lrrn2
Rif1
Mapk14
Cdhr1
Tanc1
Spint1
Zfp976
H2az2
Wdr61
Tprn
Meaf6
Tmem42
Timm44
Exd2
T2
Rgs12
Frzb
Mt1
Casc3
Pelp1
Vrtn
Pms1
Ormdl1
Fahd2a
Slain2
Slc12a2
Terf2
Gpsm2
Bcl7b
Crocc
Smarca1
Krba1
Fam214a
Stc2
Syne1
Obsl1
Inha
D3Ertd751e
Bcl10
Rtn4rl1
Ssh1
Dcaf11
G2e3
Pnrc1
Poll
Dpcd
Pcif1
Ptpn14
Snn
Ipo8
Usp36
Zfp62
Vrk1
Fstl1
Tmeff1
Mreg
Mylpf
Tbc1d10b
Spg20
Asap1
Pum1
Fnta
Ghitm
Rheb
Fcor
Gngt2
Abi3
Ncoa1
Ago3
Tab1
Aktip
Mrpl49
Fau
Axl
Ppp2r5b
Chgb
Hsdl1
Dnaaf1
Mllt1
Cpsf4l
Trim72
Chid1
Zfp341
Cacng7
Proser2
Tha1
Iars2
Tfeb
Utp15
Ankra2
Tmem178
Cachd1
Slc25a22
Ptk7
Abca8b
Adam22
Rtkn
Dlc1
Ppat
Paics
Zkscan5
Scaf11
Mboat1
Tulp4
B3gnt2
Stx11
Stk32a
Hs3st5
Slc9a3
Mthfd2l
Rab4a
Hdac1
Mrps15
Dhx32
Tdrd3
Sec22c
Kctd9
Cdca2
Cacng2
Ttc21b
Tcf7l2
Gcn1
Mapk8
Cep63
Anapc13
Ap3b2
Hectd1
Car14
Tmem131l
B4galt2
Zfp787
Il1rapl1
Dynll2
Nacc1
Fam118a
Trmt1
Ccn2
Hcfc2
Tle4
Hnrnpa2b1
Cbx3
Rbm45
Pcbp1
Serp1
Eif2a
Nphp3
Shoc2
Bbip1
Cep112
Phf10
Nyap1
2610528J11Rik
Set
Pdrg1
Sphkap
2210016F16Rik
Usp10
Il17d
Dnajc10
Prex1
Cyp4x1
Ugp2
Ubtd1
Mms19
Ptdss1
Mterf3
Numa1
Tpd52
Tpm1
Cdkl2
Kctd12
Tor4a
Trip12
Fbxo36
Ptprg
Epn3
Rsph4a
C1ql1
Cnn3
Rest
Ust
Ropn1l
Lrrc8b
Tgfbr3
Serpini1
Pdcd10
Parp6
Adgra2
Slc14a1
Ttc9b
Camk1d
H6pd
AB010352
Cdkn2aip
Csnk2a1
Klc3
Actn1
Baz1b
Chrna9
Zyg11a
Trim25
Prkar1a
Tef
Psd3
Dmap1
Prmt8
Exosc6
Ghr
Btf3l4
Txndc12
Ltb4r2
Ksr2
Arhgap29
Gapvd1
R3hdm2
Mmp15
Pdp2
Cd24a
Il17rd
Malt1
Coa4
Phf20
BC107364
Shroom3
Clcn4
Slc35d1
Cnbp
Utp14b
Acsl3
Slc5a6
Atraid
D5Ertd579e
Socs2
Zfp286
Stmn1
Mad2l2
Draxin
Clasp2
Gsx1
Spink2
Rprd2
Eif4e
Slc4a2
Ost4
Pcbp2
Tbl1xr1
Fbxl15
Rragd
Tmem229a
Tmem121b
Ube2d1
Cep55
Sugt1
Col5a1
Cand2
Retreg1
Tmem198
Chpf
Mafg
Suz12
Tbc1d4
Utp23
Neil2
Sec22b
Trim68
Xpo6
Adnp
Pnkd
Faap20
Aamp
Shox2
C2cd2
Csrp2
P4hb
Chst15
Hapln4
Mael
Cnot2
Nectin2
Vti1b
Map1lc3a
Ubr5
Tgfbr1
Rtcb
Tatdn3
Nsl1
Pdpr
Steap3
Atad2b
Pkm
Loxl3
Dok1
Hoxc13
Hinfp
Epm2a
Speg
Nfatc3
Srd5a3
Dab1
Tvp23a
Setdb2
Gm45935
Cab39l
Fbp1
Dennd1a
Dhrs7b
L3mbtl2
Gtf2a2
Pygo2
Lama5
Nmnat3
Tcirg1
Trim7
Dmkn
Pik3r3
Cltc
Mapkapk5
Nefh
Ap1b1
Rnaset2b
Rnaset2a
Snx17
Eif2b4
Klhl34
Moxd1
Lgmn
Gtf3c4
Ddx31
Sowahc
Septin10
Ccdc9
Rock2
Rbpjl
Clasp1
BC031181
Zdhhc2
Togaram1
Klhl28
Pdgfra
Dpf1
AI413582
Sco2
Dus2
Ddx28
Slc31a1
Fkbp15
Clip4
Dsn1
Shprh
Tafa3
Fbrsl1
Gabrb3
Nt5c3
Bag3
Mettl14
Spag4
Nup85
P2ry1
Cd300lg
Cand1
2510009E07Rik
Fam241b
Fam136a
Yod1
Adgrb3
Dennd2c
Rab37
Map3k20
Arhgap42
Plcb4
Skil
Tfg
Setx
Slc19a1
Napepld
Gch1
Pacsin3
Snca
Dctn4
Ttc14
Alg13
Syde2
Ptpn3
Slc13a2
Rbm24
Glra1
Mob1a
Ido1
Ginm1
Cdh11
Slc46a3
Itga1
Gls2
Klhl13
Fgf4
Eif4g2
Got2
Snx15
Hr
Cpxm1
Wdfy3
Atrnl1
Atg5
Prlr
Ift140
Cramp1l
Kcnj4
Bcl7c
Sbno2
Aff4
Cfap97
H1f4
Tiparp
Gja4
Fn1
Plekhh1
Lypd6b
Lpar2
Gm10318
Vwa8
Btla
Vdac3
Ppm1n
Stra6l
Mturn
Appl2
Pld6
Il18
Bco2
Cd47
Igf2bp3
Tmem189
Slc39a8
B4galt7
Gm2237
9930012K11Rik
Wwtr1
Arhgap24
Prkab2
Atp11b
Jade3
Fam102a
B230219D22Rik
Layn
Pdzd2
St6galnac2
Camkk1
Mycl
Ppp2r3a
Gne
Slc17a5
Plaat3
Cfap20dc
Csk
Lsm14b
Mnt
Vsx1
Zfp996
Tfpi
Ncoa2
Vgll3
Ece1
Kcnq3
Trerf1
Zyg11b
Cds2
Agfg1
Prnp
Prn
Gm19668
Ptpdc1
Stard6
4930503L19Rik
Eml6
Magi3
Zhx1
Caps2
Npc1
Castor1
Zfp319
Usb1
Rcsd1
C1ql3
Utp18
Mbtd1
Smarce1
Pdik1l
Parp8
Sqstm1
Pcdhgb6
Prom1
Rrbp1
Mfsd11
Srsf2
Camk2n1
Trip10
Sf3b3
Cog4
Ndufa6
Slc40a1
Wsb1
Borcs5
Unc5b
Dpf3
Zscan30
Slc27a2
Ncoa7
Ypel1
Trmt61a
Gm17660
Sh3gl3
Gm3285
Col26a1
Camta2
Xbp1
Nid2
Gna13
Tox
Fbxo10
Cit
Kcnip4
Slc10a7
Rbmxl1
Fam107a
0610010K14Rik
Abi2
Stam2
Rassf8
Tle6
Cdk19
Phldb1
Cct2
Psap
Scrn3
Cir1
Csde1
Oplah
Ubr7
Zfp687
Plekha7
Mical1
Secisbp2l
Cxcl11
Tspan2
Avl9
Ggnbp2
Sntg1
Pdha1
Snap29
Pi4ka
Gm3173
Tmem214
Sorl1
Rasgrp2
Atp1b2
Syne2
Pcmt1
Lats1
Tlcd2
Pdlim3
Immp2l
Zbtb12
Rrm2
Msrb2
Gpr107
Sap18b
Sap18
Pcdh9
Tppp
Mov10
Rybp
Phlda3
Foxp1
Sbk2
Erc1
Cdr2l
Slc39a4
Wtap
Rin2
Umad1
Rpa3
Mfap3l
Tmem119
Ndfip2
Ngf
Fbxo25
Soat1
Gabpb1
Mycbp2
Wdr20
Phyhipl
Dusp10
1700056E22Rik
Tmem44
Glra3
Trim36
Stx8
Cfap52
Herc6
Rmdn1
Rpl10a
Akt2
Myo1e
Smim1
Rbms1
Hacd3
Clic4
Pik3cd
Parp12
Ntng1
Mpc2
Dcaf6
Slc35a2
Kank2
Ppp1ccb
Ppp1cc
Marchf1
Nadk2
Dyrk4
Cap1
Gm9736
Crh
Fbxo11
Mtap
Krtap10-4
Extl3
Dgkh
Zfand6
Slc30a9
Epb41l4a
Myadml2
Gm3448
Gm3417
Tcte3
Gm3435
Kmt5b
Smndc1
Wnt16
Ndufab1
Entpd4b
Entpd4
Jade1
Reln
Zfat
Actn2
Actr10
Psmg1
Cdk6
Arhgap19
Gm3739
Slc9a3r1
Klf6
Ap1g1
Ldlrad4
Perp
Gm9508
Slc66a2
Mink1
Mylip
Spred1
Tdp2
Acot13
Adra1a
Cmas
Jpt1
Dph5
Hmgxb4
Galk1
Kif5a
Ap1g2
Ptpre
Ppp1r14a
Dvl1
Gls
Maz
Sdc4
Alg9
Tlr2
Scrt2
Srpr
Foxred1
Sf3a1
Ccdc157
Dner
Esrrb
Tspan17
Cracr2a
Fignl1
Cuedc1
Zbtb18
Arih2
Fam53a
Uqcrq
Fam20b
Camkv
Hmgb3
H1f5
Tepsin
Ndufaf8
Tsc22d3
Suclg2
Tcf12
H3c11
Maneal
Fut10
Mtfr1l
Cdc16
Tafa5
Mxd3
Raph1
Afg1l
Foxo6
Hhex
Ppp1r3c
Glcci1
Gosr2
Slc25a44
Zfp598
Cbln3
Sgk1
Mmp11
Chchd10
Wipf1
Ddx3x
Cops3
Zfp941
Lhx1
Kcnq1
Plekhd1
Cd63
Wnt11
Tbx1
Garnl3
Atp1b1
Cystm1
Lifr
Gm2696
Fam90a1b
Apoo
Zfp143
Thsd7a
Gjd2
Dnajb2
Spop
Cluh
Rnf216
S1pr1
Zfhx3
Zfp788
Otud1
Afap1l2
Klhl22
H3f3b
Hpca
Gpbp1
Epb41l4b
Ddx60
Ppm1a
Frmd6
Prpf3
Klf1
Mob1b
Phf12
Tmem104
Nat9
Gas2
Fancf
Brpf1
Igfbpl1
Vars
D17H6S56E-5
Stk32b
Ctbp2
Atxn1
Mpc1
Dnajc15
Tc2n
Fgfrl1
Trim8