ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7546913 | ES cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◢ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◣ SRX7546913: ES cells

◢ SRX7546914: ES cells

◢ SRX823607: ES cells

◢ SRX12142046: mESCs, differentiated

◢ SRX12142051: mESCs, differentiated

◢ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◢ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Alg14
Znrf1
Letmd1
Ncdn
AU040320
Slc15a1
Pabpc1
Vezt
Fgd6
Gatad2a
Prdm4
Mphosph8
Slc6a16
Atrn
Wsb2
Man2a2
Gid4
Lama1
Cd38
Asxl1
Kif17
Rheb
Eno1
Nphp3
Colec12
Wdr59
Zcrb1
Pphln1
Spata24
Zfp964
Atxn3
Mbd3
Ywhae
Trim72
Arfgef1
Coro2a
Exoc6b
Rif1
H3f3a
D5Ertd579e
Chd1
Tmed7
Eif1a
Ccdc30
Klf5
Apbb2
Terf2
Arl2
Prkag1
Mllt1
Mllt6
Smc6
Gen1
Oga
Lrrc8b
Pacsin2
Ufsp1
Tbc1d5
Snx15
Tmem62
Tulp4
Tagln3
Sfxn2
Arl3
Myo10
Rnf125
Dynll2
Alg13
Atg5
Adgra2
Rpp14
Htd2
Mios
Rassf8
Slc12a4
Rybp
B3gnt7
Apc
Prnp
Prn
Dnttip2
Donson
Qpct
Cep63
Anapc13
Flywch1
Togaram1
Klhl28
Slc37a3
Pvr
Notch2
Mapk14
Slc9a3r1
Spag4
Slc26a8
Ptch2
Mreg
Mrps15
Umad1
Rpa3
Cenpb
B3gnt4
Cluh
Polg2
Gne
Dhx32
Parp12
Ptprz1
Zdhhc6
Vti1a
Tfeb
Ccn2
App
Ubr5
R3hdm2
Pcgf1
Usp5
Stmn1
Nefh
Ap1b1
Dcaf11
Cep70
Nadsyn1
Dhcr7
Tprn
Tmco4
Enpp4
Cds1
Ptpra
Pdcd2
Grb2
Ddx20
Prkar1a
Chrac1
Ift140
Cramp1l
Cpsf4l
Sptb
Cerkl
Vrk1
Ints9
Hmbox1
Ddah2
Fahd2a
Fbxo5
Ralb
Cmas
H2az2
Zscan10
Abl2
Rbm47
Ndrg1
Tmem131l
Pdpk1
Ppp1ccb
Ppp1cc
Cd300lg
Aldh5a1
Ppp2r3a
Usp37
Cnot9
Dpf3
Cfl1
Smad6
Slc35f2
Pcif1
H1f2
Lrrn2
Rnf122
Chid1
Mrpl49
Fau
Adnp2
Med12l
Gdap1
Cecr2
Col26a1
Cuedc1
AU022252
P3h1
Cbll1
Dgkd
Faim
Rab4a
Castor1
Fam136a
Zfand6
Slc17a5
Tbc1d9
Hspb1
AI413582
Picalm
Snn
Slc4a2
Coq2
Mterf1a
D3Ertd751e
Mael
Fcor
Tdrd3
Ccdc9
Etv6
Tvp23a
Arhgap32
Ppp2ca
Prelid3a
Yod1
Mkrn2
Irgm1
Zfp9
Plcxd1
Trabd
Hipk2
Grid2ip
Hdac1
Ust
Tmeff1
Baz1b
Phyhipl
Gsx1
Pygo2
Tmtc4
Cdkl2
Lifr
Wbp11
BC049715
Pdlim5
Mapk4
Timm44
Asap2
Zhx1
Atp2c2
Pnkd
Aamp
Parp6
Serpini1
Pdcd10
Slco5a1
Slc31a1
Fkbp15
Cdkn2aip
Ttc28
Ido1
Foxd2
Dnmt3a
Gpbp1
Pdp2
Fbrsl1
Zbtb25
Zbtb1
Steap3
Foxf1
Cul5
Mterf1b
Cd47
Zdhhc2
Axin1
Camkk1
Glra3
Klhdc8b
Ccdc71
Kcnj4
Cds2
Dhrs7b
Shoc2
Bbip1
Fam161a
Ndrg4
Klf1
Racgap1
G2e3
Mnx1
Hsdl1
Dnaaf1
Scaf11
Slc12a2
Casc3
Mturn
Rabggta
Sh3rf1
Msc
Ghitm
Cdc45
Ptpn14
Spred1
Sbk1
Arap2
Rtcb
Plekha7
Sbk2
Rnf220
Poc1b
Galnt4
Exd2
Caprin1
Akt2
Coil
Atp1a1
Syne2
Reep5
Mrps35
Unc5b
Rap2a
Tcea3
Zfp868
Fubp3
Mib2
Wnt3a
Fam118a
Pxdc1
Gprc5a
Slc16a9
Marchf7
Uhrf2
Smad4
Coa4
Cdhr1
Chn1
Bcl10
Zfat
Pik3r3
Pdrg1
Timm9
2700049A03Rik
Ywhag
Slc25a22
Gja4
Ginm1
Elovl2
Cdc16
B3gnt2
Il17rd
Dis3l
Garre1
C1ql1
Asap1
Apoe
Pdia3
Catsper2
Arid3c
Hey1
Gjc1
Tsga10
Rest
E030030I06Rik
Ssh1
Smarce1
Frg2f1
Foxj3
Btf3l4
Ahdc1
Fam227b
Dtwd1
Pigk
Xpo6
Slc22a17
Ntng1
Mapkapk5
Iqch
Aagab
Unkl
Recql4
Lrrc14
Slc25a1
Vdac3
Ptdss1
Mterf3
Rnf103
Dus2
Ddx28
Nkiras2
Galnt16
Pitx3
Ccdc60
Ephb3
Tmem42
Nfix
Prrc2b
Dmap1
Dyrk4
Dvl1
Tmem200c
Usp36
Hcfc2
Zfp36
Akip1
Pcbp2
Zkscan17
Slc13a2
Tbl1xr1
Zfp976
Hmgxb4
Slc27a2
Klhl2
Clasp2
Lgmn
Fignl1
Zfp217
Hpgd
Poll
Dpcd
Mpzl1
BC031181
Limk1
Oplah
Tiparp
Arhgap19
Tmc6
Arhgap42
Ninj1
Itm2b
Ncoa1
Cacng2
Mt1
Ube2d1
Tpd52
Lpgat1
Trim7
Prom1
Ccdc134
Crocc
Actr10
Cst3
Trmt1l
Swt1
Nup85
Atad3a
Msra
B4galt2
Fads1
Prmt7
Klf11
Setdb2
Gm45935
Cab39l
Myadml2
Shroom3
Coq8b
Msh6
Ubfd1
Ears2
2210016F16Rik
Tent5c
Mllt10
T2
Utp15
Ankra2
Hif3a
Hcn4
Ap1g2
2510009E07Rik
Cand1
Wipi2
Zfp64
Naa16
Mtfr1l
Socs2
Wiz
Csde1
Fbxl15
Pnrc1
Spast
Fam178b
Pde3a
Fndc3b
Fam102a
Gpcpd1
Plxna1
Gna13
Ccpg1os
Ccpg1
Lrrn4
Srd5a3
2700081O15Rik
Tmem170b
Slc14a1
Snx17
Eif2b4
Col5a1
Cdk13
Ptges2
Stk38
Sms
Klhl13
Wnt16
Kcnma1
Suclg2
Rad51ap1
D6Wsu163e
Abcc1
Ppp2r5b
Rtn4rl1
En2
Tmem199
Poldip2
Igfbpl1
Tcl1
Abca8b
Mnt
Iqgap2
Zfp663
Trmt61a
Camk2n1
Midn
Hnrnpa2b1
Cbx3
Hinfp
Lpar2
Zscan18
Sntg1
Tubgcp6
Flnc
Adamts7
Nfatc3
Dok5
Tab1
Mettl9
Pdha1
Unk
Kcnt1
Fnta
Adam12
Sh3gl3
Afg1l
Meaf6
Ppfia1
Egln1
Tada3
Arpc4
Ttc9b
Pou3f3
Cd55
Aktip
H3c15
H3c14
Hes3
Ppp2cb
Golm2
Enah
Cfap300
Suz12
Srpr
Foxred1
Trim8
Pgrmc2
Mfap3l
Pkm
Rpp38
Nyap1
Pus3
Ddx25
Ube2v2
Smad7
Cct2
Pex5
Usp13
Slc39a4
Mafg
Bcap31
Abcd1
Chd7
Itga9
Pex11g
Mib1
Map2k5
Stx11
Gpsm2
Col27a1
Ppia
Ssr1
Rpp40
Klc3
Tigd5
Eef1d
Plekha5
Plcb4
Nrros
Cdr2l
Spata7
Tcim
Rnf8
Trmt9b
Denr
Fosl1
Ctif
Rasa2
Per3
Hectd1
Ppfibp1
Mier2
Ptch1
Uhrf1bp1
Vgll3
Car2
Cers5
Tanc1
Phlpp2
Slc39a3
Foxp1
Smim1
Bloc1s5
Tasor
Cbs
Dsn1
Herpud2
Sdhaf4
Pawr
Tor4a
Maz
Clk1
Utp23
Ryr2
Ube3c
Edf1
Zfp62
Ggnbp2
Ccser1
Ppara
Myo5c
Jak2
Tinagl1
Mkx
Smarca1
Rrbp1
Krtap10-10
Tmem104
Nat9
Trim36
Phf20
Dennd2c
Exosc6
Mon2
H3c13
H2bc18
Dlat
Glra1
Mamstr
Pld6
Esrrb
Cux2
Ggps1
Arid4b
Got1
Zfp839
Rab18
Hps3
Kcp
Cand2
Tlcd2
Cep112
Kcnq3
Gmeb2
Rsbn1
Camk1d
Txlng
Pxk
Anp32a
Ska3
Mrpl57
Steap4
Pdxdc1
Mpv17l
Nectin2
Tmem198
Chpf
Pdpr
Garnl3
Dpp6
Phc2
Crh
Zfhx3
Pou2f1
Tsc22d3
Ube2c
Tra2a
Nlgn2
Rhbdf1
Tmem256
Leprotl1
Prmt8
Scoc
Mat2a
Mthfd2l
Immp2l
Plin3
Gtf3c4
Ddx31
Hmx3
Kmt2c
Npepps
Zxdc
Gabrb3
Ndufa6
Pdp1
Ubtf
Lrrc8d
Spry4
N4bp1
Foxp2
Dnajc6
Ccdc194
Zfp598
Accs
Zfp512b
Prmt9
Cox5a
Slc66a2
Prune1
Yrdc
1110065P20Rik
Zyg11a
Slc25a44
Vps8
Bcl7b
Tafa3
Rnf216
Mfsd13b
Cdr2
Csnk1g2
Fmnl2
Fbxl7
Fgfrl1
6430571L13Rik
Bdkrb2
Tyw3
Cryz
Csnk2a2
Sugt1
Cit
Dmtn
Timp2
Krit1
Ankib1
Ckap2
Gclm
Prkag2
Ctbp1
Klhl1
Pald1
Snap29
Pi4ka
B230219D22Rik
Ovol2
Zfp687
Zfp24
Slc30a9
Csrp2
Slco4c1
Csnk2a1
Fbp1
Camta2
Mef2d
Pmp22
4930453N24Rik
Ppfibp2
Negr1
Trim25
Cuedc2
Napepld
Brwd1
Tmsb10
Gpn3
Fam216a
Tmem106b
Kdm2b
Dnajc10
Tdh
Ubtd1
Mms19
Rnps1
Nnt
Cd63
Dctn4
Cnn3
Cops3
Tgfbrap1
AI597479
Cdh24
Rbm38
Glul
Rmi1
Hnrnpk
Nemp1
Ttc21b
Spint1
Fam219b
Egfl7
Gcnt4
Apcdd1
Letm1
Cbln1
Dusp15
Mettl14
Zscan30
Mink1
Mapkapk2
Pcbp1
Nup188
Dolk
Gngt2
Abi3
Tfg
Erc1
Tmem189
Cfap97
Grk3
Lrrc8e
Cdh7
Wwp1
Efr3b
4930402H24Rik
Irx2
Erbin
Cfap20dc
Amd2
Amd1
Tdp2
Acot13
Bcl11a
Wdr61
Xbp1
Sec24d
St7
Gpr27
Lrrc24
Kank2
Plaat3
Setx
Sco2
Tubb5
Epb41l4b
Rufy3
Prkab1
Inafm2
Slc22a23
Mdm1
Nat14
Neil1
Rgl1
Arpc5
Six5
Lonrf1
Cnnm4
Pdxp
Rimkla
C77080
Tcf12
Osgin2
Islr2
Pou5f1
Nmnat3
Nt5c3
Fus
Tmem44
Lrrc8c
Gls
Adcy9
Alg10b
Slc30a3
Cracdl
Zfp532
Rcc2
Polr1d
Lnx2
Rnf34
Vash1
Zyg11b
Ints13
Fgfr1op2
Cdc42ep2
Vars
D17H6S56E-5
Fxr2
Prkg1
Tapbp
Nadk2
Cdk6
Fyn
Iars2
Hacd3
Ptpre
Abcb4
Syndig1
Acbd5
Slit3
Kpnb1
Set
H2-DMa
Brd2
Adam22
Gab1
Mgat1
Mindy2
Tmx3
Atl2
Tamm41
Ttc13
Arv1
Pm20d2
Hcn1
Snrnp35
Foxe1
Acp6
Mylpf
Tbc1d10b
Kcng3
Agpat5
Pusl1
Acap3
Dicer1
Rap1b
Kcnh2
Katnal1
Zdhhc24
Actn3
Mmp15
Avl9
Glcci1
Homer3
Zfyve9
Kin
Atp5c1
Camkv
Cnbp
Stard6
4930503L19Rik
Dym
Tomm20
Usp10
Sec22b
Fcho2
Zfp977
Lcor
Gpank1
Csnk2b
Slc26a2
Srcin1
Tpm1
Actl6b
Ppp1r8
Ece1
Btbd1
Fam81a
Nudt8
Spata2l
Tmem43
Chchd4
Wipf1
Krba1
Strip1
Kpna1
Ubqln1
Sash1
Trip12
Fbxo36
Ost4
Tmem229a
Clasp1
Map3k20
Fhod1
Slc9a5
Igsf9
Akirin2
Trim28
Lhx1
Tle4
Ppp1r36
Ddx3x
Phactr2
Grap2
Lrig3
Ptpn9
Gm27021
Emc8
Cox4i1
Agfg1
Gdpgp1
Cib1
Trp53bp1
Fam171a1
Dusp10
1700056E22Rik
Phax
Aldh7a1
Ezh1
Megf8
Nrep
Ate1
Ppp2r5a
Banp
Psd3
Tbc1d1
Dlk2
Ormdl3
Loxl3
Dok1
Sap18b
Sap18
Mpp5
Marchf1