ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX15057958 | mESCs, differentiated
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◢ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◢ SRX7546913: ES cells

◢ SRX7546914: ES cells

◢ SRX823607: ES cells

◢ SRX12142046: mESCs, differentiated

◢ SRX12142051: mESCs, differentiated

◢ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◣ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Cd38
Alg14
Atrn
Gatad2a
Smc6
Gen1
Eno1
Pabpc1
Sbk1
Gid4
Asxl1
Ufsp1
Letmd1
Zcrb1
Pphln1
Enpp4
Man2a2
Slc6a16
Grb2
Mphosph8
Mkx
Ints9
Hmbox1
Znrf1
Irgm1
Coq2
Slc37a3
Rbm47
Ywhae
Donson
Wsb2
Wipi2
Lama1
Pacsin2
Ubtf
Itm2b
Tbc1d5
Pitx3
Snrnp70
Pcif1
Fbxo5
Slc12a4
Trabd
Prdm4
Apbb2
Cul5
Lefty1
Frzb
Ptprz1
Mllt10
Vezt
Fgd6
Stmn1
Oga
Arfgef1
Zfp964
Apc
Ppp2ca
Marchf7
Kdm2b
Spata24
Mmp25
Adnp2
Exoc6b
Phf10
Colec12
Inafm2
Pou5f1
Nudt1
E030030I06Rik
Tmco4
Flywch1
Ptpra
Tmed7
Eif1a
Zfp36
Mylpf
Tbc1d10b
2610528J11Rik
Mterf1b
Syne1
Zfp9
H2-DMa
Brd2
Dhx32
Ddx20
Rpp14
Htd2
Pdcd2
Tagln3
Coil
Sfxn2
Arl3
Fstl1
Terf2
Ccdc60
Golm2
Chd1
Trip12
Fbxo36
Arl2
Sema6a
Pnrc1
Shoc2
Bbip1
G2e3
Trim33
Faim
Klf5
Pxdc1
Lrrc8d
Mios
Enah
Abl2
Cep70
Polg2
Kif17
Mterf1a
Mbd3
Ndrg1
Tent5c
Pvr
Cds1
Notch2
Il17d
Rnf8
Glul
Mreg
Dynll2
Mapre2
Gdpgp1
Cib1
Zdhhc6
Vti1a
Sptb
Plcxd1
R3hdm2
Slc39a4
Lrrn4
Nkiras2
B3gnt7
Arap2
H1f2
Mapk14
Nbea
Ncdn
AU040320
Tmem131l
Ednrb
Agfg1
Phlpp2
Pald1
Ttc21b
Sh3rf1
Tmem62
Ddah2
Smad4
Fcor
Prelid3a
Arhgap32
Snn
Usp36
Asap2
Pum1
T2
Ksr2
Nsrp1
Hnrnpa2b1
Cbx3
H3f3a
Fbxl7
Cerkl
Pou2f1
Arid3c
Usp37
Cnot9
Cdkn2aip
Zfand6
Lifr
Chrac1
Coro2a
Atxn3
Scd1
Ralb
Trim25
Gpsm2
Qpct
Hcfc2
Wdr59
Mapk4
Ccdc30
Mpped2
Pdia3
Catsper2
Pelp1
Tmem63b
Mrpl14
Tfeb
Tgfbr1
Phc2
Tapbp
Rmi1
Hnrnpk
Gngt2
Abi3
Slco5a1
Parp6
Ptch2
C1ql1
Actn1
Pdpr
Serpini1
Pdcd10
Smarca1
Zfp341
Prmt9
Zfp868
Zfp62
Myo10
App
Cpsf4l
Csnk2a1
Usp13
Scrt2
Slc12a2
Hoxc13
Ppp3cb
Neil2
Slc4a2
Tbl1xr1
Rbm45
Exd2
Usp32
2300009A05Rik
Efemp1
Ptprg
Fbxo11
Rtcb
Castor1
Ptk7
Smad7
Ropn1l
Hif3a
Dmtn
Ubr5
Prkag1
Loxl3
Dok1
Tab1
Ttc9b
Prkar1a
Aktip
Tcf7l2
Pde3a
Dgkd
H2az2
Ppp2r5b
Rnf125
Rheb
Rab4a
Pdxdc1
Mpv17l
Mrpl49
Fau
Naa16
Col5a1
Mthfd2l
Zbtb25
Zbtb1
Slc9a3
Rasgrp2
Ptdss2
Garre1
Cdkl2
Tmem42
Pms1
Ormdl1
Ncoa1
Kcnj4
Klhl1
Cacng2
Msh6
Klhdc8b
Ccdc71
Spint1
Arhgap42
Coq8b
Pik3r3
Trim72
Cox5a
Gas2
Fancf
Camk1d
Tfpi
Slc16a9
Col13a1
Cfap300
Fam107a
Rtkn
Tsga10
Timm44
Ppat
Paics
Rif1
Coa4
Prrc2b
Hsdl1
Dnaaf1
Zfp64
Dennd1a
Kcnn2
Pdp2
Picalm
Chid1
Prickle1
Sec22c
Wdr61
Hdac1
Ap3b2
Vdac3
Bcl7b
Usp10
Zfp976
Glra1
Skil
Mtfr1l
Fam241b
Mturn
4930402H24Rik
Cd47
Tle4
Zdhhc2
Tmeff1
Kif5c
Fads1
Set
Srd5a3
Neil1
Dner
Med12l
Ptpdc1
Obsl1
Inha
Stk32a
Kcnq3
Fam160b2
Fam227b
Dtwd1
Tpd52
Chn1
Vgll3
Xpo6
Ccdc194
Akt2
Cdhr1
Gsx1
Tdrd3
Proser2
Mapk8
Tor4a
Tmc7
Casc3
Msc
Zfp839
Snx17
Eif2b4
Foxd2
H3c13
H2bc18
Hinfp
Tanc1
Nacc1
Trmt1
Pcbp2
Zbtb12
Slc35f2
Mmp15
Oplah
Ddx60
Tprn
Krba1
Tle6
Tcirg1
Trim68
Smim1
Sdc4
Csk
Ust
Rgs12
AU022252
Nphp3
Stat5b
Sox7
Hipk2
Socs5
Dctn4
Vrk1
Ggps1
Arid4b
Ssh1
Car14
Mapk3
Cd24a
Tubb5
Togaram1
Klhl28
Adam22
Lrrc8b
Secisbp2l
Fbrsl1
Mink1
Meaf6
Ptch1
Fam136a
Tmem121b
Zyg11a
Cluh
Malt1
Pygo2
Eif4e
D5Ertd579e
Trip10
Hcn1
Arhgap24
Phyhipl
Apoe
Adamts20
AI661453
1700001C19Rik
Ccn2
Napepld
Appl2
Jak2
Rragd
Rock2
Rab37
Rnaset2b
Rnaset2a
Mt1
Ttc14
Hmga1b
Hmga1
Fahd2a
Unkl
Mob1a
C2cd2
Pdha1
Kctd9
Cdca2
Ptpn14
Pgrmc2
Faap20
Icam1
Spg20
Mafg
Nup85
Dcaf11
Dab1
Pik3cd
Immp2l
Galk1
Tada1
Bcl10
Pkm
Epn3
Tbc1d9
Dgkh
Slc25a22
Clcn4
Parp8
Ost4
Slc30a9
Dvl1
H3c15
H3c14
Umad1
Rpa3
Nid2
Tfg
Igf2bp3
Cuedc1
Hmgxb4
B4galt1
Fnta
Mnx1
Pnkd
Aamp
B3gnt4
Cand2
Ltb4r2
Irx2
Ppp2r3a
Fn1
Per3
Chst15
Retreg1
Cct2
Hivep2
Slc46a3
Psd3
B4galt2
Ypel1
Cnn3
Ccdc3
Phf20
Rgl2
Cacng7
Hectd1
AI413582
Nadk2
Hr
Sec22b
Stc2
Klhl34
Suz12
Ift140
Cramp1l
Aff4
Rsph4a
Utp14b
Acsl3
Tmem161a
Chrna9
Alg9
Rab33b
Atg5
Ddx3x
Zfp977
Sbk2
Ppara
Csrp2
Poc1b
Galnt4
Asap1
Stx11
Ctdsp2
Prmt8
Slc22a23
Skor1
Slc40a1
Zkscan5
Btbd1
Ntng1
Slc27a2
Il18
Bco2
Adam12
Fgfr2
Iqcc
P2ry1
Erc1
Rufy3
Scaf11
Mical1
Pdk1
Trim36
Slc13a2
Bcl7c
Mllt1
Sntb2
Sf3a1
Ccdc157
Mfap3l
Tulp4
Mov10
Cxcl11
Got2
Cux2
Sugt1
9930012K11Rik
Klc3
Scrt1
BC107364
Kmt2c
Ptpn3
Rhbdf1
Esrp2
C1ql3
Gm3173
Ndufa6
Zfp978
Ran
B3gnt2
Tpm1
Ubtd1
Mms19
Clip4
Srpr
Foxred1
Plekhh1
Lypd6b
Slc14a1
Septin2
Hdlbp
Zfp787
Tmem199
Poldip2
Cd63
Gja4
Raph1
Slc25a44
Wtap
Uqcrq
Tmem175
Gak
Atrnl1
Tvp23a
Cand1
Abca8b
Ttc28
Cds2
Pus3
Ddx25
Gapvd1
Eml6
Sowahc
Septin10
Nefh
Ap1b1
Fam118a
Ppp1ccb
Ppp1cc
Fgf4
Trim7
Adgra2
Ndufab1
Mnt
Impdh2
Mettl9
Pias3
Fam222b
Ipo8
Recql4
Lrrc14
Zfp996
Gna13
Trim13
Lrrn2
Kank2
Cenpb
Fam20b
Thsd7b
Rrm2
Gm2237
Exosc6
Sox2
Paip1
Herc6
Tob1
Ccpg1os
Ccpg1
Uhrf2
Rps23rg1
Rassf8
Ugp2
Cass4
Clasp1
Dhrs7b
Tef
Mob1b
Plxna1
Parp12
Ube3c
Kcnab3
Tmem189
Lpgat1
Mfsd11
Srsf2
Mllt6
Cmas
Cdk6
Slc9a3r1
Mrps15
Cltc
Zfp687
Tmem229a
Fbxo25
Phldb1
Ccdc9
Slc66a2
Epm2a
Psap
Neurog3
Baz1b
Zfp217
Pcbp1
Extl3
Mrps23
Atp11b
Ccdc6
Herpud2
Col27a1
Afap1l2
Timm9
2700049A03Rik
Mkrn2
Tdh
Klf4
Steap3
Igfbpl1
Pou3f3
Ncoa2
Ifitm1
Zfat
Col2a1
Myo1e
Rnf103
Foxo6
Spag4
Kcng3
Dpf3
Fzd10
Cdk13
Fam90a1b
Apoo
Maz
Tmem178
Atad2b
Nfat5
Fadd
Reep2
Iqgap2
Fitm2
Smndc1
Magi3
Phlda3
Cnbp
Dpf1
Shox2
Eif4g2
Gm10406
Caps2
Itga1
Tnk2
Strn
Ptdss1
Mterf3
Nanog
Mamstr
Mpc1
Foxf1
Mael
Wdr20
2210016F16Rik
Klhl22
Cachd1
Socs2
Nectin2
Rnf11
Zfp219
Dyrk4
Sp4
Trim8
Trmt61a
Map3k20
P4hb
Zscan30
Ap1g1
Slc45a3
Mlf2
Pbld2
Hnrnph3
Prex1
Msra
Dlc1
Rnaseh2b
Gmeb2
Atp1a1
Numa1
Ube2d1
Hsf2
Prkab2
Zfp143
Rest
Adamts7
Avl9
Snap29
Pi4ka
Slc35d1
Nup153
Otulin
Setdb2
Gm45935
Cab39l
Gtf3c4
Ddx31
Krit1
Ankib1
Efs
Vti1b
Sec31a
Mettl14
Dis3l
Gm3739
Ndfip2
Actr10
Cops3
Yod1
Mcam
Synj2
B4galt7
Zfhx3
Ptp4a2
Dennd2c
Sorl1
Lgmn
Npcd
Cbx6
Csnk1g2
Btla
Spred1
Tesk2
Vwa8
Plcb4
Ago3
Pard6g
Ppp1r13l
Cd3eap
Fignl1
Abi2
Bag3
Brpf1
Prom1
2510009E07Rik
Cnpy1
D3Ertd751e
Fbxl15
Slc25a24
Mboat1
Gne
Npepps
Lpar2
Utp23
Ppm1n
Hspb1
Trerf1
Cdr2l
Tmem44
Cttn
Iars2
Caprin1
Mgat1
Elmod1
Gabrb3
Slain2
Clic1
Gosr2
Myef2
Clasp2
Nr1d2
Sf3b3
Cog4
Foxp4
Ccnjl
Gm3285
Kcnc2
Marchf8
Kmt5b
Dusp10
1700056E22Rik
Washc4
Snx15
Dsn1
Xbp1
B230219D22Rik
Spry2
Lsm14b
Kcnip4
Vps51
Bmpr1b
Lrp5
Btf3l4
Txndc12
Ggnbp2
Gtf2a2
Rnf38
Arhgap29
Zfp319
Usb1
Vsx1
Jpt1
Vwa2
Sall4
Actn2
Wwtr1
Myo1b
Tppp
Mib1
Rbpjl
Nfatc3
Klhl2
Gcn1
Slco4c1
Zfp54
Ap1g2
Cd55
P3h2
Epb41l4b
Morf4l2
Cep112
Vrtn
Smad6
Spata13
Rnf138
Slc5a6
Atraid
Ncoa7
Agpat5
Ehmt2
Stx8
Cfap52
Tbc1d4
Pdzd4
Phf12
Jade3
Axl
Ssr1
Crocc
Ahdc1
Hapln4
Calm2
Stk32b
Zfp975
Abr
Degs1
Gm10318
Prnp
Prn
Fam102a
Nup210
Poll
Dpcd
Frg2f1
Foxj3
Syde2
Mfsd13b
Cdr2
Shroom3
Tlr2
Srsf6
Bmper
Fermt2
Ppm1a
Pacsin3
Cnot2
Mxd3
Vav2
Afg1l
Plekhg5
Hjurp
A730008H23Rik
Cmtm3
Ryr2
Tmem170b
Hsp90ab1
Slc39a7
Rxrb
Shprh
Cep63
Anapc13
Grm2
Unc5b
Utp15
Ankra2
BC031181
Hoxd3
H1f4
Pcdh1
Cyp4x1
Wipf1
Klf13
Cbln3
Akap11
Zhx1
Fbxl19
Stra6l
Gm9736
Mdm1
Barx2
Rab18
Lhx1
Dab2ip
Tmem198
Chpf
Mcrs1
H6pd
Pacs2
Sav1
Sap18b
Sap18
Msrb2
Nrros
Mylip
Ccdc134
Dmkn
Kansl1l
Chst5
St3gal2
Slc17a5
Kras