ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7546914 | ES cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◢ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◢ SRX7546913: ES cells

◣ SRX7546914: ES cells

◢ SRX823607: ES cells

◢ SRX12142046: mESCs, differentiated

◢ SRX12142051: mESCs, differentiated

◢ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◢ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Alg14
Znrf1
Pabpc1
Trp53
Letmd1
Slc15a1
Wsb2
Gatad2a
Prdm4
Vezt
Fgd6
Ncdn
AU040320
Zcrb1
Pphln1
Slc6a16
Asxl1
Eno1
Rheb
Oga
Trim72
Cd38
Mphosph8
Atrn
Kif17
Spata24
Lama1
Prkag1
Gid4
Apbb2
Man2a2
Colec12
Coro2a
Nphp3
Pacsin2
Wdr59
Dhx32
Rassf8
Terf2
Sfxn2
Arl3
Mbd3
H3f3a
Exoc6b
Zfp964
Smc6
Gen1
Atxn3
Ywhae
Mios
Tagln3
Ddah2
Tmed7
Eif1a
Ubr5
Tulp4
Arfgef1
Lifr
Ufsp1
Donson
Rif1
Dynll2
B3gnt7
Fahd2a
Alg13
Stmn1
Prelid3a
Prnp
Prn
Bcl10
Tmem62
Dnttip2
Myo10
Klf5
Rnf125
Slc37a3
Ptprz1
Lrrc8b
D5Ertd579e
Rybp
Ift140
Cramp1l
Notch2
Flywch1
Polg2
Ddx20
Ccdc30
Qpct
Togaram1
Klhl28
Mllt1
Slc9a3r1
Arl2
Tmem131l
Adnp2
Ndrg1
B3gnt4
Atg5
Dhrs7b
Adgra2
Chd1
Zscan10
Mapk14
Med12l
Slc26a8
Prkar1a
Rpp14
Htd2
Mrps15
Parp6
H1f2
Tdrd3
Apc
Slc25a22
Sptb
Cenpb
Tprn
Sbk1
Pvr
Col26a1
Ptch2
Zfand6
Gne
Parp12
Shoc2
Bbip1
Ptpra
Tfeb
Vrk1
Tbc1d9
Coq2
Rab4a
Snx15
Tbc1d5
Pcgf1
Gsx1
Ppp2r3a
Fcor
Sbk2
Usp37
Cnot9
App
Cdkn2aip
Snn
Mllt6
Slc31a1
Fkbp15
Cmas
R3hdm2
Mreg
Smad6
Rnf122
Dcaf11
Chrac1
Cd300lg
Zfp9
Sh3rf1
Pdp2
Ppp2ca
Pcif1
Unc5b
Zdhhc2
Fbrsl1
Enpp4
Zdhhc6
Vti1a
Rest
Ccdc9
Serpini1
Pdcd10
Kcnj4
D3Ertd751e
Fbxo5
Nefh
Ap1b1
Hsdl1
Dnaaf1
Cds1
Prrc2b
Ralb
Hmgxb4
Glra1
Tmco4
Grb2
Cep70
Ccn2
Cbll1
Dgkd
Fam136a
Pdcd2
Wbp11
BC049715
Lpgat1
Trmt61a
AI413582
Coa4
Tmem170b
Cdc16
Mterf1a
Asap2
Golm2
Spag4
Abl2
Zhx1
Fam227b
Dtwd1
Scaf11
Gdap1
Usp5
Slc12a4
Zfp36
Tmeff1
Ido1
Dyrk4
H2az2
Aldh5a1
Snx17
Eif2b4
Mib2
Racgap1
Il17rd
Ints9
Hmbox1
Cecr2
Fubp3
Slc16a9
Umad1
Rpa3
Pxdc1
Rabggta
Ap1g2
Klhdc8b
Ccdc71
Mtfr1l
Chid1
Actr10
Phyhipl
Plcxd1
Mrpl49
Fau
Faim
Rtcb
Lgmn
Exd2
Mt1
Camkk1
Slc17a5
Ndrg4
Timm44
Tsga10
2210016F16Rik
Zfp868
Spast
Itm2b
Nadsyn1
Dhcr7
Mturn
Plekha7
Pdlim5
Arid3c
Arhgap32
Slc25a1
Rap2a
Coil
Marchf7
Hcfc2
Slc35f2
Dpf3
Arhgap19
Mapkapk5
Cdkl2
Picalm
Chn1
Atp2c2
Steap3
Etv6
AU022252
P3h1
Gmeb2
Pygo2
Tcea3
Slco5a1
Castor1
Hspb1
Ccdc60
Vdac3
Slc4a2
Poll
Dpcd
Socs2
Cep63
Anapc13
Ryr2
Tvp23a
Smad4
Hipk2
Cerkl
Mterf1b
C1ql1
Pitx3
Klhl13
Pdha1
Fam118a
Tent5c
Cdc45
Pnrc1
Pus3
Ddx25
Hes3
Cit
Fbxl7
Mettl9
Rbm47
Caprin1
Trabd
Hnrnpa2b1
Cbx3
Mamstr
Clasp2
Ppp1ccb
Ppp1cc
Pik3r3
Mafg
Wiz
Tmtc4
Midn
Nfix
Ttc9b
Fam161a
Slc12a2
T2
Rnf103
Pdia3
Catsper2
Ttc21b
Cep112
Gjc1
Mnx1
Oplah
Ube2d1
Akt2
Hdac1
Tdp2
Acot13
Glra3
E030030I06Rik
Lrrn2
Ust
Rpp38
Cul5
Pdrg1
Cds2
Foxd2
Rpp40
Recql4
Lrrc14
Kcnt1
Arhgap42
Msh6
B3gnt2
Zbtb25
Zbtb1
B4galt2
Slc22a17
Nkiras2
Lrrc8e
Fads1
Mkrn2
Irgm1
Ttc28
Slc22a23
Yod1
Hgh1
Fbxl15
Gna13
G2e3
Slc13a2
Pex5
Pgrmc2
Klhl2
Abcc1
Cacng2
Lrrn4
Fndc3b
Unk
Dab1
Btf3l4
Txndc12
Pxk
H3c15
H3c14
Cfl1
Csnk2a2
Ptch1
Cluh
Ntng1
Kcnq3
Nup85
Hey1
Denr
Ephb3
Setdb2
Gm45935
Cab39l
Atad3a
Tbl1xr1
Ctif
Klf1
Cpsf4l
Tmem42
Actl6b
Ppfia1
Enah
Stk38
Timm9
2700049A03Rik
Lrrc8d
Trim7
Rad51ap1
D6Wsu163e
Mapk4
Garre1
Pnkd
Ubfd1
Ears2
Aamp
Mrps35
Smarce1
Axin1
Slc25a44
Tubgcp6
Ppfibp1
Setx
Dus2
Ddx28
Ppp2r5b
Plekha5
Ubtf
Cdk13
Ssh1
Msc
Unkl
Ahdc1
Hif3a
Suclg2
Cuedc1
Tmem63b
Mrpl14
Fam178b
Ube2c
Xpo6
Trmt1l
Swt1
Cd55
Rasa2
Nup188
Dolk
Poc1b
Hcn4
Galnt4
Ginm1
Mael
Zfp64
Pdpk1
Bloc1s5
Col27a1
Zfat
Camk2n1
Tab1
Bcap31
Abcd1
Ywhag
Tpd52
Nfatc1
Wipi2
Naa16
Nat14
Fam102a
Ddx3x
Gprc5a
Timp2
H3c13
H2bc18
Gpbp1
Ghitm
Zfp62
Sf3a1
Ccdc157
Pigk
Rsbn1
Prmt9
Srd5a3
Hpgd
Iars2
Reep5
Ints14
Wnt3a
Mkx
Dsn1
Trim8
Bod1l
Dok5
Spred1
Dvl1
Zfp839
Slc14a1
Cd47
Gpcpd1
Pdpr
Rnf220
Acbd5
Ncoa1
Per3
Hectd1
Dis3l
Exosc6
C1ql3
Zfp217
Napepld
Wdr61
Mpzl1
Atp1a1
Smim1
Rab37
Mnt
Ninj1
Erbin
Immp2l
4930402H24Rik
Utp15
Ankra2
Gcnt4
Hacd3
Cdr2l
Dnajc6
Mllt10
Smad7
Rhbdf1
Klf11
Map2k1
Garnl3
Mettl14
Sap18b
Sap18
Cdhr1
Ccpg1os
Ccpg1
Rtn4rl1
Csde1
Stx11
Fnta
Ptges2
Pyurf
Txlng
Sh3gl3
Igfbp2
Trip10
Mfap3l
Tmem104
Nat9
Nfatc3
Tmc6
Tmc8
Mapk8
Rrbp1
Kin
Atp5c1
Smarca1
Nrros
Pkm
Zfp976
Grid2ip
Meaf6
Uhrf1bp1
Ube3c
Zscan30
Mier2
Arap2
Igfbpl1
Mfsd13b
Cdr2
Shroom3
Phc2
Chrm4
Ggps1
Arid4b
Glul
Afg1l
En2
Snapc2
Gclm
Trim36
Crocc
Trim68
Sun1
Casc3
Plaat3
Caps2
Crh
Fignl1
Tcim
Baz1b
Klhl23
Trmt9b
Slc39a4
Tiparp
BC031181
Tmem44
Sntg1
Syne2
Nt5c3
Tmem106b
Osgin2
Polr1d
Lnx2
Plcb4
Tsc22d3
Tdh
Pex11g
Tspan17
Gls
Hinfp
Zkscan17
Map2k5
Cst3
2510009E07Rik
Gtf3c4
Ddx31
Lcor
Tafa3
Galnt16
Ska3
Mrpl57
Slc39a3
2700081O15Rik
Phax
Aldh7a1
Pde3a
Asap1
Washc4
Proser2
Ipo8
Tmem200c
Ccdc134
Ptdss1
Mterf3
Ppat
Paics
Pou3f3
Gmcl1
Edf1
Rmi1
Hnrnpk
Lrrc8c
Rnf8
Tbx1
Prmt8
Cbs
Sin3b
Fosl1
Cfap300
Hmgb3
Kcnma1
Tor4a
Nadk2
Axl
Tgfbrap1
AI597479
Cnnm4
Arhgef16
Myo5c
Slco4c1
Ripply1
Limk1
Tubb5
Txnrd2
Comt
Nyap1
St3gal3
Inafm2
Nlgn2
Tmem256
Adamts7
Pdp1
Lpar2
Amd2
Amd1
Myadml2
Xbp1
Prrt4
Kcp
Plekhg2
Cachd1
Frmd6
Krt17
Rnf11
Yy1
Epha10
Usp13
Ptpn14
Slc46a3
Abcb4
Mthfd2l
Pcbp2
Uhrf2
Mylip
Zfp598
Ssr1
Tra2a
Prkab1
Nid2
Erc1
Cbfa2t3
Zfpm1
Ppia
Cux2
Iqch
Aagab
Gpank1
Csnk2b
Spink2
Dctn4
Gnaq
Polg
Pcm1
Gja4
Chd7
N4bp1
Gabbr1
Gapvd1
Tinagl1
Fgfrl1
Epb41l4a
Kl
Flnc
Kcnh2
Gdpgp1
Cib1
Phlpp2
Ptpre
Slc66a2
Plin3
Phf20
Brwd1
Nectin2
Rnase4
Ang
Ppp2cb
Uqcrq
Wipf1
Dnmt3a
Letm1
Csad
Zfp740
Tspan2
Kcng3
Ndufa6
Pex5l
Nnt
Tle4
Prom1
Slc27a2
Kif5a
Usp36
Zyg11a
Ppfibp2
Stx8
Cfap52
Fam107b
Sav1
Cdc42ep2
Foxp2
Plcl1
B4galnt3
Coq8b
Suz12
Cand2
Actn1
Mindy2
Chrd
Thpo
Scoc
Bag3
Map3k20
Gpr27
Bcl7b
P2ry1
Fyn
Iqgap2
Apoe
Mpc1
Stc2
Alg10b
Mylpf
Tbc1d10b
Slc9a3
Zeb2
Tbc1d1
Hsf2
Mpc2
Dcaf6
Cdh24
Scd1
Gab2
Srpr
Foxred1
Maz
Tmcc1
Nmnat3
Avl9
Sco2
Nap1l1
Tmem70
Csnk1g2
Hmga1b
Hmga1
Gm19402
Set
Dnajc10
Tpm1
Plxna1
Tshz3
Malt1
Wnt16
Tmem199
Poldip2
Ints13
Fgfr1op2
Pld6
Zfp286
Klc3
Clip4
Acp6
Vps51
Zfp36l3
Yrdc
1110065P20Rik
Vars
D17H6S56E-5
Akip1
Mmp15
Pm20d2
Rab18
Gpn3
Fam216a
Zfp687
Sms
Elovl2
Foxp1
Sorl1
Nfat5
Zscan18
Msra
Mink1
Pdik1l
Ccdc194
Gabpb2
Cbln1
Ctbp1
Pou2f1
Mtap
Nr3c2
Egln1
Mkln1
Cd63
Tmem198
Chpf
Rab42
Tgfbr1
Ilkap
Ppp1r36
Nfe2l2
Traf2
Pdk1
E2f7
Bcl11a
C2cd2
Sec22c
Mapkapk2
Nagk
Lrrn1
Bcas3
Mef2d
Pdcd4
Vmn1r77
Cpped1
Abca8b
Adam22
Foxf1
Fam169b
Zfp24
Trim65
Fbp1
Csnk2a1
Cdk6
Esrrb
9930021J03Rik
Usp35
Kctd21
Arhgap21
Ckap2
Ube2v2
Unc13a
Cadps
Peak1
Hmg20a
Sncaip
H2-DMa
Brd2
Btbd1
Slc12a5
Aasdh
Fastkd1
Ccdc126
Dennd2c
Impdh2
Atp11a
Tafa5
Ost4
Got2
Top3b
Mib1
Med26
Ext1
Klf6
Serp1
Eif2a
Herpud2
Stard6
4930503L19Rik
Lcorl
Spryd4
Cobll1
Eif4enif1
Cracdl
Leprotl1
Stxbp4
Cox11
Stk10
Hells
Tcf12
Atl2
Tasor
Glg1
Rab6a
Gab1
Mdm1
Prmt7
Ldlrad4
Rnps1
Tob1
Utp23
Shb
Kpnb1
Sugt1
Prune1
Sh3bp2
Bdkrb2
Apcdd1
Olfr1344
Mindy1
Kdm2b
Spint1
Pkp4
Ccdc148
St7
Ppp3cb
Cdk19
Adamts20
Pcbp1
Nrep
Ovol2
Stk32b
Dlat
Ptp4a2
Elf4
Fam120c
Klf16
B2m
Clybl
Kank2
Htr1d
Sp5
Nr1h2
Rcsd1
Afap1l2
Zfp977
Cnnm1
Lsm2
Spata7
Klhl1
Trip12
Fbxo36
Cfap20dc
Clk1
Jak2
Hs3st3a1
Trerf1
Pdzd2
Spry4