ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX12142051 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◢ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◢ SRX7546913: ES cells

◢ SRX7546914: ES cells

◢ SRX823607: ES cells

◢ SRX12142046: mESCs, differentiated

◣ SRX12142051: mESCs, differentiated

◢ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◢ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Alg14
Gatad2a
Ufsp1
Atrn
Cd38
Eno1
Tfpi
Smc6
Gen1
Pabpc1
Znrf1
Lhx1
Donson
Colec12
Mphosph8
Zfp964
Letmd1
Ifitm1
Gid4
Pitx3
Ywhae
Ints9
Hmbox1
Zfp9
Tbc1d5
Fam107a
Vrtn
Mapk3
Man2a2
Trabd
Rbm47
Mrc1
E030030I06Rik
Wbp4
Elf1
Ddx20
Kctd9
Cdca2
Itm2b
Cdhr1
Obsl1
Inha
Faim
Frzb
Mycl
Pacsin2
Cul5
Fbxl7
Fbxo5
Spata24
Ubtf
Sbk1
Car14
Chd1
Sema6a
Nkiras2
Grrp1
Chrna9
Mllt10
Glul
Cep55
Prdm4
Msc
Asxl1
Abi2
Apbb2
Coq2
Rtkn
Zcrb1
Pphln1
Slc12a4
Tmem229a
Rbm24
Apc
Slc6a16
Lama1
Tmc7
Arfgef1
Oga
Ptch2
Vezt
Fgd6
Polg2
Neurog3
Grb2
Exoc6b
Zdhhc6
Vti1a
Sfxn2
Arl3
Tmco4
Adgra2
Cer1
Tanc1
Enpp4
Notch2
Zfp975
Casz1
Mapre2
Mapk14
Ptprz1
Chst15
Coq8b
Tmed7
Eif1a
Cep70
Atxn3
Klf5
Gm19668
Ppp2r5b
Rnf125
Ccdc30
Qpct
Arl2
Tbc1d9
Fam227b
Dtwd1
Ednrb
Wipi2
Ddah2
Pdcd2
Klhl1
Kdm4a
Tprn
Nudt1
Col13a1
Phc2
Golm2
Phlpp2
Arap2
Gm9736
Mylpf
Tbc1d10b
Hmga1b
Hmga1
Stc2
Prelid3a
Tdrd3
Slco4c1
Tmem119
Adnp2
Slc37a3
Tapbp
Foxp1
Pou2f1
Rbpjl
Mkx
Ptpra
Mterf1b
Msh6
Tsc22d3
Zfp976
Pdia3
Catsper2
Rasgrp3
Tsga10
Inf2
D3Ertd751e
G2e3
P3h2
Slc35g2
Mterf1a
Lrrc8d
Tgfbr3
H1f2
Sh3rf1
Ndrg1
Lsm14b
Fam110c
Tada1
Klf6
Sprr2a3
Sptb
Rheb
Pde3a
Helt
Kdm2b
Mbd3
Pik3cd
Olfr368
Hcfc2
Mpped2
Ralb
Fnta
Snrnp70
Cox5a
Wsb2
Marchf7
Coro2a
Syne3
Ost4
Hnrnpr
Grid2ip
Tmem121b
Trim36
Zeb2
Gdpgp1
Cib1
Chrac1
Prickle1
Cfap300
Gm10318
Dmtn
Tmem63b
Mrpl14
Spink2
Pgrmc2
Ssh1
Mios
Nmnat3
Pms1
Ormdl1
Ncdn
AU040320
Zbtb25
Zbtb1
Ncoa1
Rmi1
Hnrnpk
Shoc2
Bbip1
Wdr59
Tmem131l
Flacc1
Tmem62
Ppp2ca
Asap1
Mnx1
Cacng2
Sprr2a2
Sprr2a1
Gm2696
Abl2
Ppp2r3a
Dnajc10
Stk32a
Hivep2
Mov10
Slc9a3
Slc16a9
Usp13
Fastk
Agfg1
Tgfbr1
Gm10100
Mthfd2l
Pnrc1
Rpp14
Htd2
Pcif1
Gpsm2
Selenbp1
Mapk8
Tagln3
Bcl10
Kcnn2
B3gnt7
Actn1
Nacc1
Flywch1
2300009A05Rik
Fn1
Zhx1
Arid3c
Ppat
Paics
Irgm1
Asap2
Malt1
Prkag1
Coil
Slc25a22
Rnf8
Rbm45
Atp1b2
Ndst1
D5Ertd579e
Zfp62
App
Naa16
Zkscan5
Fads1
Prex1
Cnn3
Pald1
Tcf7l1
Usp37
Cnot9
Wdr61
Dennd1a
Got2
Prmt9
Vrk1
Clcn4
T2
Chid1
Atoh8
Smad7
Zfp868
Kif5c
Slc39a4
Kank2
Appl2
Slc27a6
Snx17
Eif2b4
Rest
Tab1
Gp1ba
Tle4
Reep2
Slc13a2
Nbea
Speg
Dusp5
Pelp1
C1ql1
Aktip
Triobp
Mesp2
Kcnab3
Syde2
Pum1
Pdxdc1
Mpv17l
Mreg
Setdb2
Gm45935
Cab39l
Crocc
Ptch1
Gm3233
Ttc21b
Mpc1
Smad4
Pvr
Fstl1
Mcrs1
Zfp64
Exd2
Eif4e
Garre1
Cd24a
Snn
H3f3a
Dctn4
Pxdc1
Hnrnpa2b1
Cbx3
Npc1
Zfp36
Casc3
Nphp3
Cerkl
Tmem184a
Tnc
Mapk4
Kcna2
Rab11fip1
Mtap
Gna13
Terf2
Slco5a1
Ypel1
Syne1
Axl
Cd63
Mafg
Togaram1
Klhl28
Bcl7b
H2az2
Poll
Dpcd
Slc10a7
Rbmxl1
Mamstr
Trim68
Dcaf11
Pdp2
Slc66a2
Plcb4
C2cd2
Tulp4
Srpr
Foxred1
Igf2bp3
Mmp15
Tmem161a
Numa1
Usp36
Rrm2
Gcnt4
Srrm4
Sphkap
Rprd2
Kcnj4
Cand2
Lgmn
Mrpl49
Fau
Rcsd1
AU022252
Mllt1
P3h1
Scrt2
Fgfr2
Krtap10-4
Tpm1
Hs3st3a1
Sulf1
Zc3h12c
Abr
Lrrc38
B3gnt2
Phldb1
Caps2
Nat8
Cdkl2
Hif3a
Abca8b
Gsx1
Spg20
Proser2
Ccn2
Trerf1
Rgs12
Csnk2a1
Rab37
Raph1
Rmdn1
Dner
Zfp319
Usb1
Sugt1
Cacng7
Setx
Gm8439
Agtrap
Loxl3
Dok1
Socs5
Pcbp2
Exosc6
Gdnf
Trim33
Efna3
B4galt7
Srd5a3
Neil1
Eif4g2
Serpini1
Pdcd10
Cep63
Anapc13
Marchf2
Mycbp2
Mob4
Sp4
Hes1
Trip12
Fbxo36
Tef
Epm2a
Sec22b
Tmeff1
Adam22
Cand1
Slc5a6
Atraid
Ndfip2
Usp10
Set
Fut4
Pik3r3
Klhdc8b
Ccdc71
Zfp787
Septin2
Hdlbp
Erc1
Spred1
Adprh
Dll3
Tle6
Spint1
Slc12a2
Abhd18
Mmp25
Sec22c
Mad2l2
Draxin
Nfatc3
Gm17660
R3hdm2
Hipk2
Clasp1
Ptk7
Nsrp1
Rtcb
Prmt8
Susd1
Tmem42
Prkar1a
Suz12
Bcl7c
Phf10
Slc40a1
Gm3285
Efemp1
Csrp2
Arhgap32
Fam90a1b
Apoo
Cltc
Plekhh1
Fbxl15
Zbtb12
Klf4
Gtf3c4
Ddx31
Spop
Prom1
Scrn3
Cir1
Clic1
Pkm
Ccdc66
Cxxc4
Mical1
Lefty1
Tcf7l2
Cd47
Ap1g2
Slc4a2
Zfp982
Smarca1
Mob1a
Pdzd2
Cpb1
Gm4925
Arl1
Slc14a1
Clip4
Pyurf
Pdrg1
Plaat3
Slc46a3
Col5a1
Slain2
Utp15
Ankra2
Atp6v1c2
Afg1l
Trip10
Stra6l
Sun1
Usp32
Svs1
Parp6
Tha1
Nynrin
Ate1
Shroom3
Strap
Timm44
Smarce1
Krba1
Ube2d1
Soat1
Scd1
Atg5
Napepld
Lamb1
Lta
Lef1
Kctd14
Srgn
H1f4
Gm2237
Cuedc1
Tbc1d4
Dsp
Slc31a1
Fkbp15
Hoxc13
Ntng1
Cd160
Clic4
B4galt1
Adnp
Slc35d1
Slc19a1
Meaf6
Fahd2a
Ssbp2
Cnbp
AI413582
Akt2
Camkv
Afap1l2
Stx11
Rab4a
Plekha2
Gne
Ppp1r8
Snx15
Dusp10
1700056E22Rik
Hdac1
Gm3250
Naaa
Zfat
Fignl1
Ptdss2
Lpar2
Adgrb3
Hr
Gm9639
Csrp1
Bag3
Myo1e
H3c15
H3c14
Jpt1
Ptdss1
Mterf3
Top3b
Gapvd1
Percc1
Immp2l
Six2
Dpf3
Orai3
Pdpr
Coa4
H3c13
H2bc18
Ppp3cb
Nectin2
Rnf103
Ctbp2
Slc6a9
Slc1a2
Apof
Nt5c3
Sowahc
Septin10
Ddit4
Cdkn2aip
Inafm2
Ccdc9
Vwa3a
Fam136a
Zyg11b
Sp5
Mtfr1l
Ptpn3
Msra
Tlnrd1
Mesd
Ptpn14
Ccpg1os
Ccpg1
Cfap20dc
Hapln4
Ghitm
Mgat1
Dlc1
Ipo8
Pdlim3
Spry2
Dhx32
Atp11b
Klhl13
Fitm2
Otud4
Fancc
Skil
B3gnt4
Dab1
Dand5
Dpysl3
Umad1
Rpa3
Mturn
Glra1
U2af1
Phf20
Sf3a1
Ccdc157
Ninj1
Gse1
Nt5dc2
Fcgr4
Zfp687
Pip4k2a
Nadk2
Tox
Iars2
St6galnac2
Dynll2
Atrnl1
Ddx59
Glt6d1
Irx2
Zfp977
Tiparp
Lrrn1
Magi3
Per3
Sox2
Mall
Uckl1
Cbln3
Hectd1
Avl9
Xbp1
Nyap1
Xpo6
Epn3
Tppp
Akap11
Cachd1
Ugp2
Gramd1c
Socs2
Zfp941
Fgfr3
Zyg11a
2700081O15Rik
Wtap
Spag4
Apoe
Castor1
Zfp286
Ltbr
Slc13a4
Itga1
Dtx1
Impdh2
Tmem175
Gak
Afap1
Slc35f2
Gab2
Kcnq3
Spry4
Itpr2
Slc30a9
Tbl1xr1
Il18
Bco2
Mt1
Elmod1
Syce2
Zfp358
Adamts18
Zscan30
Gnaq
Cmtm3
Map3k20
Ago3
Klf11
Unc5b
9930012K11Rik
Coch
Cluh
Dmap1
Gm9507
Rock2
Psmg1
Cdk6
Gngt2
Abi3
Wnt16
Sgpl1
BC107364
Slc39a8
Nfatc4
Mettl14
Kctd12
Fam13c
Bax
Pdap1
Bud31
C1ql3
P2ry1
Fut10
Sco2
Fzd1
Fbxo25
Foxf1
Lpgat1
Mindy2
Mn1
Fbxo11
H3c11
Shox2
Fhl2
Vwa8
Ralyl
Pax7
Adcy8
Phyhipl
Frg2f1
Foxj3
Hdgf
Hsf1
Bop1
Cd55
Aff4
P4hb
Rnase4
Ang
Prtg
Gcc2
Ust
Iqch
Aagab
Wnt2b
Klc3
Cngb1
Gabrb3
Atad2b
Arhgap42
Iqgap2
Ctdsp2
Sec31a
Sox7
Sgk1
Glrx3
Ryr2
Utp14b
Acsl3
Tafa3
Fndc3b
Csk
Reln
Mmp21
Dus2
Ddx28
Zdhhc2
Trim66
Ece1
Ak4
Pkhd1l1
Recql4
Lrrc14
Nfe2l2
Cnot10
Chrd
Rad51ap1
D6Wsu163e
Lrrn4
Tpd52
Borcs5
Sox12
Plcxd1
Hinfp
Tlr2
Cyth1
Ttc9b
Stk32b
Adra1a
Cdkn2a
Vsir
Ano6
Plag1
Nudt8
Smim14
Syt13
Lonrf1
Rnf138
Yod1
Acot11
Pou3f3
Zfp996
Gsn
Rmi2
Plekha6
Ubtd1
Mms19
Phlda3
Kcnf1
Pygo2
Smndc1
Efcab6
Psd3
Clcn2
Atp1b1
Nr1d2
9930021J03Rik
Cnot6
Myb
Impg1
Racgap1
Cfap97
Vti1b
Ndufab1
Hjurp
A730008H23Rik
Syt6
Tfeb
Snap29
Pi4ka
Bmper
Tatdn3
Nsl1
Pcdh9
Zfp667
Abl1
Fgfrl1
Hcn4
Slc29a1
Lama5
Rhbdl3
Tmem178
Rgl2
Proser1
Nhlrc3
Ddx50
Cct2
Loxl4
1700125H20Rik
Bmp7
Prrc2b
Tbx1
Rbms1
Rnaseh2b
Esrrb
Hnrnph1
Cers5
Gm9508
Zbtb18
Prkab2
Wnt11
Pcmt1
Lats1
Gm3667
Slc17a5
Smad6
Gm19402
Gtf2a2
Trim72
Ppp1ccb
Ppp1cc
Slc18a3
Chat
Ndrg4
Nup85
Slc22a23
Vgll3
Galk1
Alg10b
Foxp4
Mecp2
Ropn1l
Scaf11
Krt79
Camkk1
Mnt
Utp23
Ap1g1
Tmem189
Hsf2
Gjd2
Foxa2
Cmc1
Tob1
Cdr2l
Wdr20
Zfp341
Trim25
Syne2
Cnot2
Cxcl11
Kmt2a
Nudt7
Sema6d
Fcor
Slc9a3r1
Arih2
Pbld2
Hnrnph3
Arhgap18
Slc27a3
Klhl29
Lyst
Hes6
Limk2
Perp
Lrp1
Dido1
Hsdl1
Dnaaf1
Cpxm1
Ezh1
Slc12a5
Csnk1a1