ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9896071 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◢ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◢ SRX7546913: ES cells

◢ SRX7546914: ES cells

◢ SRX823607: ES cells

◢ SRX12142046: mESCs, differentiated

◢ SRX12142051: mESCs, differentiated

◢ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◢ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◣ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Slc9a3
Cep55
Slc2a9
Syt6
Cd38
F5
Selenbp1
Fam107a
Fam214a
Zfp9
Gm8439
Ppp1r14a
Neurog3
Syce2
Mmp25
Alg9
Mov10
Pitx3
Cdh4
Dok7
Kif5c
Gm9736
Tbc1d9
Dand5
Mrc1
Chrna9
Myl2
Rnf125
Adamts18
Mesp2
Arap2
Nudt1
Agfg1
Stra6
Sbk1
Herc6
Mast1
Adm2
Tmc7
Cd47
Slc6a16
Fut4
Alg14
Espn
Coch
Ptgds
Col8a1
Tprn
Pik3cd
Arhgef4
Spata5l1
Lgals1
Frzb
Npas2
Nacc1
Trmt1
Jdp2
Vezt
Fgd6
Rbm47
Cpsf4l
Tafa3
Klf6
Marchf7
Gm9508
Klhl29
Rbm24
Kcnk9
Cnot2
Arid3c
Stx11
Susd2
Kcnn2
Gm10100
Mtap
Zfp341
Cd109
Ryr2
Syde2
Dscam
Gm3233
Tnfaip8l3
Bmper
Glul
Trabd
Tgfbr1
F830045P16Rik
Htr1b
Pappa
Sprtn
Exoc8
Lsm14b
Helt
Tnfrsf8
Ocm
Fam149a
Abi2
Usp13
Pdgfra
Clstn2
Gpr35
Siglec1
Numa1
Ptprz1
Asxl1
Mkx
Casd1
Flrt1
Capn5
Mall
Atp6v1c2
Scrt2
Enpp4
Slc30a10
Lta
Macroh2a2
Erfe
Nt5c
Flacc1
Shroom3
Fam110c
Rmi1
Hnrnpk
Por
Fut10
Gm3285
Znrf1
Bend7
Rbms1
Prss12
Pcgf5
Tmem98
Sulf1
Pde3a
Alg13
Gm10318
Kcnh1
Slc39a4
Mapk4
Slc9a9
2700081O15Rik
Oxt
Cngb1
Stk32a
Sema6a
Slc16a9
Svs1
Lrrc8c
Percc1
Gngt2
Abi3
Tanc1
Stk32b
Spg20
Mn1
Acacb
Htr1d
Col13a1
Kcns1
Olfm1
Smc6
Gen1
Atp9a
Vegfb
Neurog1
Dip2b
Npw
Litaf
Ppp3ca
Cuedc1
Atp11a
Asap2
Syne3
Ptk7
Gm3238
Lipe
Cabp7
Kdm4a
Ubtf
Gyg
Trim36
Col27a1
Wfdc21
Rasgrp2
Cd160
Mob4
Ube2d1
Ost4
Phf10
Tead1
Gadl1
Krtap10-4
Tox
Per3
Krt24
Lhx1
Hip1
Ppp1r36
Shb
Bcl2
Notch2
Zcrb1
Pphln1
Sh2b2
Fam107b
Pxdn
Rtl8a
Tyro3
Chn1
Ubn2
Dab2ip
Rtl8b
Grid2ip
Arfgef1
Wnt11
Camk4
Clcn2
Acvr1c
Dusp5
Cmklr1
Slc35g2
Speg
Loxl4
Plin3
Sh3rf1
Inpp1
Nlgn2
Amd2
Amd1
Set
Pld6
Phldb1
Slc18a3
Chat
Hspbp1
Ptpn3
Rsad2
Nova1
Nudt3
Spink2
Gzmm
Septin3
Drd5
Upp2
Acvr1
Vstm5
Scd2
Kcnc2
En2
Jhy
Plekhh1
Dlk2
Atp5g2
Wbp4
Elf1
Lamb1
Fhod1
Lmod3
Rbpj
Nfix
Scube3
Rapgef3
Ust
Rell1
Gbx1
Ints9
Hmbox1
Hs3st5
Pip4k2a
Mpped2
Hr
Map2k6
Casc3
Pdzd2
Lypd6b
Tsc22d3
Atp2b1
Gm19402
Nckap5
Hmga1b
Hmga1
Adgra2
Gatad2a
Sox2
Kitl
Zfp91
Lpxn
4933411K16Rik
Mphosph8
Tmem229a
Man2a2
Arhgef3
Srpx
Chrna7
Kctd14
Rtn4rl1
Mapkapk2
Csrp1
Mab21l2
H1f2
Rtkn
Myh11
Podn
Cer1
Zfp236
Syne1
Pafah1b2
Nptxr
Gm45337
Anks1b
Fyn
Krtap10-10
Epm2a
Ctif
Ddx60
Cyp2w1
Scube1
Tcte2
Afdn
Cdx1
Fgr
Pcolce2
Ptch1
Nfe2l2
Wnt2b
Cdk19
Fam171a1
Robo1
Abhd8
Gjc1
Ccdc6
Fam181b
Aunip
Drd4
Srrm4
Tnfsfm13
Tnfsf12
Ncoa1
Asic2
Grrp1
Fgd5
Hcn1
Gm3250
Slc45a3
Zfp672
Mmp21
Zfp36
Hoxd3
S1pr2
Tfpi
St6galnac2
P3h2
Ubqln1
Tmem131l
Vrtn
Chrdl2
Mtnr1b
Hyi
Slc31a2
Gpam
Fnta
Rin2
Man1a
Agmat
Rgs12
Pcdhgb6
Brwd1
Pik3r5
Gpr146
Astn2
Nkiras2
Kdm2b
Tada1
Cdhr1
Slc9a3r2
Hivep1
Tmem117
Acaa1b
Dse
Gdf10
Tmem63b
Mrpl14
Fstl1
Pdp1
Fgfr2
Phlda3
Macrod1
P2ry2
Camk2a
Adamts7
Kcna2
Lrrn1
Ttc39c
Lefty1
Nt5c3
Insyn2a
Pabpc1
Faim
Tmem239
Mycl
Wsb2
Chrm4
Arhgap32
Rab11fip1
Mef2b
Cass4
Gse1
Ltbr
Pde1c
Skil
Trib1
Extl3
Mcam
Mreg
Rsph4a
Grin2c
Lama1
Tcf20
Cort
Wnt7a
Fgf3
Susd4
Lingo1
E030030I06Rik
Zfp64
Krtap17-1
Lyzl6
Ldlrad4
Spast
Ttc28
Hoxb9
Cxxc4
Efcab6
Cdc7
Ndst1
Igfbp4
Ghr
Myo5b
Mef2a
Enah
Fbxl19
Calcb
Smarce1
Pm20d2
Hey1
Lypd1
Utp18
Mbtd1
Fn1
Sorbs3
Ppara
Igf1r
Loxl3
Dok1
Kcng3
Tspan14
Nadk2
Zbtb14
Osbpl8
Hsdl1
Dnaaf1
Rap1gap2
Mllt10
Got2
Rprml
Thbs2
Slc35d3
Itprid2
G2e3
Itga1
Ssh1
Fgfrl1
Pafah2
Fbxl7
Bcl9
Phactr1
Slfn2
Gm2102
Gab1
Foxa2
Avl9
Map1lc3a
Zfp964
Atrn
Fndc3c1
Slc25a10
Sphkap
Dusp2
Cd55
Thra
Spred1
Rgma
Dab1
Bcar3
Rasa2
Slc5a8
Barx2
Naaa
Raet1a
Ptpra
Dennd1a
Wdr86
Pgm1
Cep112
2410004P03Rik
Paxx
Slc25a23
Tlr2
Nxn
Sdk1
Adam12
Rnf217
Sec61g
Spint1
Chsy1
Gabrg3
Mapre2
Slc24a3
Msmp
Ufsp1
Popdc3
Zfp598
Fam102b
Saraf
Odf2
Foxf1
Trim7
Pcsk2
Ccdc60
Septin8
Cd24a
Parp8
Ssbp2
Dixdc1
Il10rb
Osgin1
Dlg5
Trp53bp1
Dusp10
1700056E22Rik
Pard6g
Nid2
Clip4
Tulp4
1700113H08Rik
Cdh20
Prss52
Vsx1
Tbc1d5
Prkar1a
Foxp1
Phlda1
Pias3
Zbtb7b
Smpdl3a
St6galnac5
Nexn
Rph3a
Dbn1
Rps6ka4
Glp1r
Ptgfrn
Zeb2
Itpr2
Ackr3
Mxi1
Ywhae
Hmgxb4
Cxcl11
Sertad2
Rhbg
Lrrn4
Skor1
Gne
Pde11a
Akip1
Gdf6
Erc1
Frem3
Tnni1
Frat1
6430548M08Rik
Letmd1
Arhgap42
Ppp1r1b
Dph5
Stmn2
Tead3
Angpt1
Tusc1
Ddx20
Tle4
Tgfbr3l
Trabd2b
Ptprm
Slc25a24
Med12l
Hnrnpr
Cdkl1
Syt13
Spaca1
Golm2
Gm19668
Sympk
Foxa3
Gja4
Tle6
Obsl1
Inha
Rims2
Rgmb
Cul5
Arhgef26
Acbd3
Trim8
Lhx2
Btnl2
Pdpk1
Sspn
Wipf1
Phf19
Gm4559
Taf15
Uhrf1bp1
Nphp3
Maz
Kcnq5
Ppm1e
Ifitm1
Inf2
Layn
Gm29776
Car14
2310030G06Rik
Slc35f3
Cbfa2t3
Styx
Phf24
6030468B19Rik
T2
Mafg
Dtx1
Phactr4
Prkcb
Klf15
Cd63
Lmx1b
Tnk2
Irf2bpl
Plcb4
Cox5a
Tmem178
Stat5a
Foxo6
Elf2
Adcy1
Stra6l
Klhl30
Prex1
Gadd45g
Arl4c
Fgf20
Cgnl1
Tgfb2
Phc2
Stat5b
B3gnt7
Pou2f1
Map4k4
Cfd
Acot11
Plbd2
Plekhg5
Vsir
Zfpm1
Chrd
Zfp319
Usb1
Tmem170b
Dsp
Mest
Heyl
Ddah2
Erbin
Iglon5
Zbtb25
Zbtb1
Yars
S100pbp
Cplane2
Slc38a8
Mgat1
Jade1
Pam
H3c11
Scx
Plaat5
Mthfd2l
Prmt8
Gid4
Tmem119
Fzd10
Itsn2
Wipi2
Adra1a
Pkmyt1
Dnmt3a
Elmo2
Aen
Rnf128
Slc24a4
Scgn
Afap1l1
Actn1
Lrba
Eno1
Cacna1g
Axin2
Tcf7l1
Ppp2r5e
Pcmt1
Lats1
Chst5
Rps6ka1
Erich4
Adgrl4
Tas1r1
Nol9
Cilp2
Fam162b
Tmem184a
Dock11
Pxdc1
Sipa1l1
Hivep2
Slc27a2
Septin2
Hdlbp
Raet1e
Cnih2
Slc29a1
Ndrg1
Mad2l2
Draxin
Tor1b
Pygl
Pxylp1
C77080
Smoc2
Lrrc38
Slc27a6
Adgrl1
Suz12
Adamts20
Ltbp4
Exd2
Neurl1b
Mfsd4b1
Epb42
Slc12a4
Tbkbp1
Lypd6
Ptprb
Plcxd1
Batf3
Slc25a36
Wdfy3
Wnk4
Serinc5
Myo10
Rgs8
Prdm4
Fcho2
Zbtb12
Hhip
Mrpl33
Axin1
Olfr368
Reln
Trio
Myrip
Eif5
Smad7
Il18r1
Tgfb1
Gm13420
Syne2
Gabrb3
Tbl1xr1
Cerkl
Tmem88
Egr4
Adgrf3
Fa2h
Six2
Acp5
Adcy5
Coq8b
Gpsm2
Sbk2
Daam1
Otud7a
Tmem62
Lama5
Plcb3
Chst2
Ltbp1
Ccn2
Hs6st3
Lbhd2
Gdnf
Pim1
Lyst
Cald1
Irx3
Fads2
Efna3
Rerg
Cand2
Amer2
Zbtb46
Evx1
Chst15
Zfp365
Cpne5
Foxd2
Sav1
Peg12
R3hdm4
Kiss1r
Cdkl2
Ngf
Pelp1
Rnf216
Gsn
Raet1d
Polg2
Mylpf
Tbc1d10b
AI661453
1700001C19Rik
Fgfr3
Socs5
Cav1
Sec22c
Utp14b
Acsl3
Pdzd8
Tmcc3
Srl
Nt5dc2
Ppt2
Prrt1
Spata24
Tle2
Spry4
Fam189a2
Gdpgp1
Cib1
Slc44a1
Mrm2
Pak6
Cldn19
Pdlim3
Tagln2
Kcnk3
Chrac1
Pdxdc1
Mpv17l
Yjefn3
Tcerg1l
Sh2d5
Aco1
Cobll1
Dpys
Trpv6
Rnf220
1700008O03Rik
Inafm2
Krtap5-1
Coro2a
Chst3
Apbb2
Limk2
Atp1b2
Paqr9
Lrrc7
Cdk6
Aven
Sbno2
Itgbl1
Rcc2
Kcnma1
Adra2c
Cnnm1
Hnrnpa2b1
Cbx3
Has3
Cplane1
Megf6
Otop1
Gab2
Bend3
Impg1
Glis2
Chd5
Podxl
Sema3f
Htr7
Lypd3
Phax
Aldh7a1
Tdh
Casz1
Polk
Cert1
Sftpd
Cacng7
Bmp2
Mpzl1
Mpp5
Lbh
Abr
Slc1a2
Fbxo5
Tmem64
Pcif1
Slc14a1
Unc5b
Fstl4
Cracr2a
Iqgap2
Slfn9
Gm9639
Glcci1
Serpine2
Pced1b
Amigo2
Pum1
Chd7
Trim25
Exoc7
Prtg
Alkbh2
Fjx1
Exoc6b
Fermt2
Colec12
Aplnr
Ncoa4
Nphp4
Kcnab2
Tapbp
Rgl2
Pkdcc
Agbl1
Ajuba
Stmn1
Pcdh1
H2-DMa
Brd2
Myh14
Pkp1
Slc13a2
Fxyd1
Pop5
Dcaf11
Arntl
Mixl1
Large1
Wfikkn2
Unk
G0s2
B3galt5
Col20a1
Rhbdl3
Abca8b
Mpc1
Nos1ap
Dmtn
Cacna2d3
Gstm3
Grb2
Apold1
Pbx2
Sema6d
Pipox
Pdxk
Tle1
Ptch2
Iars2
Slc5a9
Cdk5r2
Crhr2
Snx17
Eif2b4
Krt79
Rfx4
Hacd4
Garre1