ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6879008 | ES cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◢ Zic3: Average

◢ SRX147572: ES cells

◣ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◢ SRX7546913: ES cells

◢ SRX7546914: ES cells

◢ SRX823607: ES cells

◢ SRX12142046: mESCs, differentiated

◢ SRX12142051: mESCs, differentiated

◢ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◢ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Rpp14
Htd2
Jade3
Tmem117
Atxn3
Cacng2
Smc6
Gen1
Ube3c
Glra1
Fam118a
Caps2
Sgk3
Dmap1
Pdrg1
Tfg
Dnttip2
Vrtn
Trabd
Chst13
Wdr59
Grb2
Rtcb
Serpini1
Pdcd10
Faim
Tusc1
Rbm45
Slc14a1
Sap18b
Sap18
Gm3285
Mterf1b
Grap2
App
Rarres1
Fbxo5
Frg2f1
Foxj3
Prdm4
Mterf1a
Tmcc1
Trim66
Colec12
Bcap31
Abcd1
Prrc1
Pvr
Tmem131l
Chid1
Stx8
Cfap52
Tfe3
Zcrb1
Pphln1
Trp53bp1
Tmcc2
B4gat1
Qpct
Trmt1l
Swt1
Prkag1
Bod1l
Ufsp1
Ppp2ca
Cerkl
Pccb
Chd1
Terf2
Phactr2
Sbk2
Ap1g1
Togaram1
Klhl28
Car14
Fam227b
Dtwd1
Fahd2a
Wdr61
Lpar1
Iapp
Dhx32
Arhgap42
Fam241b
Oga
Clk1
Klhl13
Polg2
Hmgb3
Ccdc30
Ptdss1
Mterf3
Zfp977
Tagln3
Ywhae
Cep112
Exd2
Rassf1
Ppp1r8
Atrn
Gpr68
Tulp4
Klhl34
Gm10318
Nadsyn1
Dhcr7
Itga9
Tmed7
Eif1a
Pdcd2
Sec22b
Arl2
Il1rapl1
Prnp
Prn
Oas1a
Timm44
Fam169b
Mkx
Rbm47
2410141K09Rik
Napepld
H2az2
Hif3a
Noxo1
Gfer
Zfp976
Zfp868
Recql4
Lrrc14
Hax1
Mettl14
Oplah
Zkscan17
Tbc1d5
Aasdh
Cuedc1
Slc17a5
Fam136a
Myo1e
Fam90a1b
Apoo
Gdap1
Shmt1
Nrxn3
Akip1
Slc37a3
Ido1
Sdhaf4
Txlng
Cdhr1
Arap2
Lama1
Gprc5a
Slc12a2
2210016F16Rik
Vstm2l
Slc39a4
Il17rd
Mtfr1l
Cds2
Serpine1
Atg5
Fndc3b
Laptm4b
Apold1
D3Ertd751e
Dcaf11
Gabrb3
Alg14
Man2a2
Zfat
Ddah2
Slc7a9
Umad1
Rpa3
Nkiras2
Ryr2
Rnf8
Prex1
D5Ertd579e
Crocc
Fbp2
Mllt1
Ift140
Cramp1l
Cxcl11
Bdkrb2
Pou2f1
Rgs12
Pdpk1
Sec24d
Arl6
Mbd3
R3hdm2
Tmco4
Stk38
Abcg2
Apbb2
Rnf125
Lsm14b
Fus
Mpped2
Arid3c
Nefh
Ap1b1
Tlr2
Trim72
Tmeff1
Ap1g2
Mindy2
Ntn4
Ppp2r5b
Slc31a1
Fkbp15
Pex11g
Spata7
Mapk14
Slc26a8
Adnp
Bloc1s5
Chrac1
Adam22
Dhrs7b
Eci3
Ptprz1
Slco5a1
Utp15
Ankra2
Wbp11
BC049715
Tmc6
Tmc8
Yod1
Meaf6
Poll
Dpcd
Actl6b
Rbpj
Tmem62
Adgb
Mphosph8
Slc9a9
Ccn2
AU022252
P3h1
Mamstr
Zfp286
AB010352
Slc23a2
Abca8b
Slc35f2
Tsga10
Lgmn
Sae1
Arl14
Dnajc6
Pgrmc2
Mllt10
Shoc2
Bbip1
Klhdc7a
Lgr6
Mib2
Rbpjl
Shc4
Nr6a1
Ptch2
Slc13a2
C2cd2
Ccpg1os
Ccpg1
Atp9a
Cped1
Sod3
Chd7
Lingo1
Grk3
Rnf220
Iqch
Aagab
Dok5
Slc39a2
Cep70
Fcor
Fbp1
Zbtb25
Zbtb1
Cd55
Ly96
Asap1
Plaat3
Dsn1
Cort
Gab2
Ncdn
AU040320
Rtkn
Suz12
Dctn4
Clmn
Neurog3
Hinfp
Rap2a
Mfap4
Ppp1ccb
Ppp1cc
Klhl1
Tmem104
Nat9
Dym
Syncrip
Stk32a
Cmas
Stoml2
Rab4a
Slc25a22
Tab1
Arhgap19
Sco2
Sh3gl3
Bach1
Smad6
Ssh1
Rpp38
Rassf8
Tvp23a
Fam107a
Mrps15
Tbc1d9
Zdhhc6
Vti1a
Zfp36l3
G2e3
Stmn1
Gsx1
Slc30a10
Mapkapk5
Bmf
Ralb
Slc25a1
Ccdc194
Prune1
Tlcd2
Ints14
Pcgf1
H3f3a
Atp11b
Zfpl1
Cdca5
Mtg1
Zfp964
Golm2
Cbs
Klhdc8b
Ccdc71
Gcnt4
Lrmp
Fam178b
Ppfia1
Pik3r3
Nrp1
Snx17
Eif2b4
Nup153
Fnta
Exosc6
Zfp65
Daxx
1700008O03Rik
Scd1
B3gnt4
Hsd17b2
Mdm1
Trmt112
Prdx5
Spata24
Nup85
Patj
Tgfbrap1
AI597479
Ndrg1
4930453N24Rik
Gab1
Rcsd1
Slc25a44
Icam1
Rheb
Cd63
Fcho2
Reep5
Dcaf12l1
Ksr2
Irgm1
Med12
Coil
Prss38
Gpr83
Trim7
Kank2
Cluh
Rab37
Lrrc34
Lrriq4
6430571L13Rik
Ints13
Fgfr1op2
Mta2
Usp48
Usp10
Mob1a
Otulin
Snx15
Hps3
Appl2
Thbs2
Rabggta
Cyb5b
Dyrk4
Prkag2
Gja4
Nav2
Ska3
Mrpl57
Mtor
Lhx1
Plcxd1
Myadml2
Zhx1
Upp1
Sprr2a2
Sprr2a1
Donson
H1f2
Tpd52
Rgl1
Arpc5
Olfr972
Grid2ip
Mrpl49
Fau
Lbr
Pdp2
Cbll1
Pdlim5
Trip10
Slc16a9
Col26a1
Tor1aip2
Fitm2
Csad
Shf
Cfl1
Tsen15
Actr6
Notch2
Uchl5
Ro60
Mtmr10
Hcfc2
Gne
Kcnc2
Tbx1
Dennd2c
Rln1
Hacd3
Impact
Nmnat3
Utp14b
Acsl3
Rhbdl3
Ywhag
Snx10
Mreg
Cst3
Acot11
Hmx3
Zp3
Defb11
2510009E07Rik
Epb41l4a
Hgh1
Wipf2
Sh2d4b
Syne1
Pygo2
Rrbp1
Zfp787
Slc25a2
Letmd1
Hipk2
Usp36
Sprr2a3
Gmcl1
Cavin3
Chrm4
Garnl3
Dipk2a
Ube2d1
Serpina3i
Dpf3
Cfap97
Krt81
Drg2
Fbxl7
Smarce1
Mnx1
Rhpn2
Pik3cd
Spred1
Ripply1
Sema4b
4930404N11Rik
Ropn1l
Rnf122
Jakmip1
Lrrn2
Tmem200c
Rest
Map2k6
Bcas3
Sowahb
Setdb2
Gm45935
Cab39l
Slc30a9
Krtap10-10
Exoc6b
Arhgap32
Insr
Castor1
Sf3a1
Ccdc157
Txn2
Ubr5
Itm2b
Timm9
2700049A03Rik
Gabpb2
Znrf1
Zkscan5
Flywch1
Rnaseh2b
Actr10
Sh3bp2
Lrrc8e
Nae1
Car7
Mtap
Rprd2
Ptp4a2
Fam81a
Prom1
Adamts7
Zfhx3
Tmem101
Rmdn1
Dpep3
Slc9a3r1
Ptpra
Zscan18
Tor4a
Upp2
Trim68
Kcnip4
Slc12a4
Myo10
Wsb1
Kdelr1
Apcdd1
Adnp2
Syngr2
Elf4
Tgfbr1
Arfgef1
Oas1g
Smad4
Tsc22d3
Hspb1
Nrros
Slc39a8
Gls
Apc
Wipi2
Hdac1
Gadd45g
Ppia
Msra
Trmt9b
Hcn4
Dlat
Srgap1
Tdp2
Acot13
Tmem161a
Gjc1
Unk
Fam171a1
Lrig3
Glul
BC031181
Vps26b
Ncapd3
Shroom3
Klf6
Bcl7c
Ahdc1
Midn
Gm2696
Glra3
Cdk5rap3
Plpp1
Slco4c1
Kcnq3
Hnrnpr
Fubp3
Cdc45
Dync1li2
Nectin2
Scrn3
Cir1
Rnf182
Ttc28
Trmt61a
Chst15
Plin3
Gatad2a
Sfxn2
Arl3
Trim36
Srpr
Foxred1
Acvr1b
Bag3
Coro2a
Pde3a
Zfp64
Zyg11a
Pglyrp1
Trpc6
Ccdc60
Esyt2
1700001P01Rik
Lrrtm3
Tlx2
Ppp1r1a
Tle6
Sbno2
Mcrs1
Tomm40l
Apoa2
Mios
C1ql1
Usp5
Ttc21b
Zfp169
Slc46a3
Stxbp5l
Rif1
Msc
Atp2c2
Pih1d2
Nkapd1
Slc15a1
Plcb4
Mrps35
Rundc3a
Nudt1
Kifc3
Rell2
Spp1
Tinagl1
Bphl
Il6ra
Gm14393
Lpl
Baz1b
Cachd1
Sms
Cfhr3
Stc2
Megf8
Tcl1
Hpgd
Anapc10
Abce1
Hectd1
Fam169a
Hspa14
Cdnf
Apof
Aqp3
Kcng3
Pigw
Myo19
Amacr
Adgra2
Tanc1
Srd5a3
Adgrg1
Zfp24
Atad3a
Anxa11
Msh6
Smyd2
Cdc42ep2
Plekhf2
Trim25
Klf1
Ago3
Map2k1
Pdpr
Mall
Camk2n2
Lrrc8d
Ndufa6
Adam12
Plcb3
Slc25a13
Sf3b3
Cog4
Adcy5
Ubfd1
Ears2
Clps
Irx4
Rpl39l
Ints9
Hmbox1
Dennd1a
Steap3
Phax
Aldh7a1
Tbc1d1
Wsb2
Sptb
Cltc
Gimap9
Tead2
Fam161a
Socs2
Fam219b
Iqcc
Vamp4
Syndig1
Fn1
Smarca1
Ube3a
Parp6
Prmt9
Mpc1
Atp1a1
Srsf5
Cd82
Zfp62
Rnpep
Fgfrl1
Atp6v1c2
Pde8a
Usp37
Cnot9
Ksr1
Alg13
Proser1
Nhlrc3
Sntg1
Dbnl
Slc25a53
Mpzl1
Ccdc142
Map7
Gtf3c3
Zdbf2
H2bc1
H2ac1
3110082I17Rik
Actn2
Cdsn
Ypel1
Nfix
Ube2c
B3gnt2
Neil2
Flna
Pabpc1
Ttc9b
Jup
T2
Dnm3
Klhl22
Ttc22
Zscan10
Tyw3
Cryz
1700125H20Rik
Aox1
Adgrg5
C1galt1c1
Rnf144b
Tyw5
Maip1
Grk6
Rln3
Asxl1
Rhbdf1
Mfsd11
Srsf2
Spryd4
Smpd5
Pxdc1
Tmem63b
Mrpl14
Pdha1
Gtf3c4
Ddx31
Ube2t
Tprn
Spag4
Ndrg4
Crh
Spdye4c
Pdia3
Catsper2
Cyrib
Mcf2l
Fut10
Ghitm
Uba6
Actl6a
Pura
Gemin5
Dhrs3
Spsb4
Got1
Poldip3
Pnrc1
S1pr1
Tmem70
Ccnd3
Usp9x
Abcb8
Arfip1
H3c6
Tsc1
Them6
Eno1
Pgm1
Pts
Ints5
Adamtsl4
AI413582
Sulf1
Tdh
Ptges2
Cit
Cdc14a
Smad7
Gm19668
Lcorl
Ppp1r13l
Cd3eap
Klhdc4
Sema6a
Unc5b
H3c13
H2bc18
Retreg1
Lamb1
Zfp397
D10Wsu102e
Zbtb7b
B4galt5
Tasor
Wnt8a
Atp9b
Imp4
Ccdc115
Abl2
Neil1
Immp2l
Nsrp1
Mon2
Porcn
Csrp2
Gtf2a2
Adgre5
Socs5
Abhd18
Mrpl44
Gm18905
Camk1d
Fosl1
Retsat
Elmod3
Tada1
Bcl10
Mkrn2
Mapk9
Nid2
Slc12a5
Cdk16
Tsc22d4
Tmem106c
Rps3a1
Dmgdh
Bhmt2
Ntsr1
Fancd2
Emc3
Slc66a2
Ddb2
Rtn4rl1
Gm4925
Arl1
Tubgcp6
Cbr3
Rasgef1a
Adam11
Med25
Clybl
Apom
Cenpu
Gid4
Nmt2
Gpbp1
Ptges3
Dnajc10
Efcab2
Dmc1
Sgo2b
Rasgrp2
Ccdc9b
Rbm41
Casc3
Trerf1
Wnt16
Bnc2
Nupr1
B3gnt7
Tfeb
Zeb2
Gm3448
Gm3417
Tcte3
Gm3435
Pld2
E030030I06Rik
Slfn9
Nat14
Sec23b
Celsr3
Ppat
Paics
Pyurf
Pawr
Mapk8
Fignl1
Htatsf1
Aldoa
Kmt2c
Kdm4a
Vwa2
Vps18
Lrrc8b
Arhgap33
Samd12
Snrnp35
Acbd5
Cdc42ep4
Sdr39u1
Slc6a16
Camkv
Rbm14
Gm21992
Zfp957
Cpsf4l
Tiparp
Cpxm1
Mxi1
Gabbr1
B4galt2
Reep2
Zscan30
Mob1b
Polg
Spock3
Il33
Ptpn14
Krt42
Tef
Mnt
Ctif
Nqo2
Rhoc
Hsp90ab1
Exoc7
Sp5
Snx3
Snrnp70
Ncs1