ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX15057955 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◢ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◢ SRX7546913: ES cells

◢ SRX7546914: ES cells

◢ SRX823607: ES cells

◢ SRX12142046: mESCs, differentiated

◢ SRX12142051: mESCs, differentiated

◢ SRX12142055: mESCs, differentiated

◣ SRX15057955: mESCs, differentiated

◢ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Alg14
Cd38
Ufsp1
Asxl1
Atrn
Smc6
Gen1
Itm2b
Pabpc1
Pitx3
Letmd1
Gatad2a
Gid4
Eno1
Slc6a16
Mkx
Rbm47
Man2a2
Ptprz1
Mylpf
Tbc1d10b
H2-DMa
Brd2
Ints9
Hmbox1
Sbk1
Enpp4
Adnp2
Pou5f1
Marchf7
Donson
Znrf1
Ubtf
Wsb2
Mphosph8
Zfp964
Zcrb1
Pphln1
Apc
Ywhae
Pacsin2
Mmp25
Arfgef1
Irgm1
Sfxn2
Arl3
Pcif1
Tmco4
Slc12a4
Lefty1
Apbb2
Fbxo5
Prdm4
Asap2
Frzb
Lrrn4
Mllt10
Cul5
E030030I06Rik
Trip12
Fbxo36
Tmed7
Eif1a
Snrnp70
Oga
B3gnt7
Grb2
Trabd
Rnf125
Wipi2
Tbc1d5
Mapre2
Colec12
Coq2
Notch2
Cerkl
Vezt
Fgd6
R3hdm2
Spata24
Tmem131l
Ppp2ca
Lifr
Hnrnpa2b1
Cbx3
Stmn1
Glul
Slc37a3
Ptpra
Hcfc2
Golm2
Mpped2
Zfp9
Arap2
Pdcd2
T2
Ddx20
H1f2
Tagln3
Sh3rf1
Plcxd1
Slc9a3
Kdm2b
Sptb
Abl2
Pxdc1
Rpp14
Htd2
Cep70
Ptk7
Prelid3a
Rif1
Arhgap42
Cds1
Mbd3
Zdhhc6
Vti1a
Ccdc30
Zfp341
Zfp36
Smad7
Ndrg1
Ccdc60
Hdac1
Phf10
App
Lrrc8d
Tent5c
Ptch2
Mib2
Polg2
Chrac1
Agfg1
Sema6a
Pik3r3
Lama1
Kif17
Terf2
Rmi1
Hnrnpk
Ropn1l
Smad4
Tanc1
Wdr59
Mreg
AI413582
H3f3a
Slc39a4
Hif3a
Il17d
Mapk4
Chd1
Ubr5
Usp13
Pou2f1
Prkag1
Nudt1
Enah
Stat5b
Zfp62
Aff4
Coil
Mterf1b
Wdr61
Pdia3
Catsper2
Obsl1
Inha
Qpct
Trim72
Fam241b
Arhgap32
Tsga10
C1ql1
Tmc7
Zdhhc2
P4hb
Slc16a9
Klf5
Myo10
Trim25
Zfp868
Casc3
Phlpp2
Fcor
Slco5a1
Klhl1
Ddah2
Tfeb
Ncdn
AU040320
Tmem63b
Mrpl14
Foxd2
G2e3
Prmt9
Rbm45
2610528J11Rik
Scd1
Rnf8
Fbxl7
Rrm2
Exoc6b
Pgrmc2
Inafm2
Skil
Loxl3
Dok1
Skor1
Unkl
Hoxc13
Mapk8
Mios
Fam227b
Dtwd1
Msc
Ap3b2
Dynll2
AU022252
Pelp1
Zfp64
Flywch1
Dmtn
Fstl1
Pdxdc1
Mpv17l
Bcl7b
Cfap300
Atxn3
Reep2
Mapk14
Kif5c
Ccdc6
Nbea
Tle4
Chid1
H2az2
Garre1
Cdkl2
Cdhr1
Cd47
Ccdc3
Gdpgp1
Cib1
Aktip
Zbtb12
Kcnc2
Pvr
Gsx1
Mterf1a
Mthfd2l
Pum1
Efemp1
Tapbp
H3c13
H2bc18
BC107364
Trim33
Parp6
Fut4
Ppp2r5b
Tpd52
Sugt1
Slc12a2
Cdkn2aip
Ggps1
Arid4b
Eml6
Ccn2
Smarca1
Trim7
Med12l
Nkiras2
Pnrc1
Pald1
Syne1
Kcnj4
Prrc2b
Pdpr
Ksr2
Hmga1b
Hmga1
Pde3a
Stk32a
Ppp3cb
Faim
Arid3c
Hivep2
Slc4a2
Naa16
Got2
Zfp687
Mink1
Ddx60
Zfp787
9930012K11Rik
Tcf7l2
Snx17
Eif2b4
Set
Nsrp1
Camk1d
Fads1
Rab4a
Mt1
Ncoa1
Ypel1
Ccdc9
Rragd
Tbl1xr1
P2ry1
Shoc2
Bbip1
Cdk6
Picalm
Zbtb25
Zbtb1
Stx11
Msh6
Clasp1
Fbxo11
Klhdc8b
Ccdc71
Vdac3
Ednrb
Il18
Bco2
Cpsf4l
Mmp15
Tmem62
Shroom3
Ptprg
Foxf1
Col5a1
Mcam
Gpsm2
Mnx1
Tada1
Magi3
Tmeff1
Tgfbr1
Ppp1r36
Slc38a2
Vrk1
Lrrn2
Tulp4
Fbrsl1
Gngt2
Abi3
4930402H24Rik
Prmt8
Gas2
Fancf
Hipk2
Usp32
Trerf1
Serpini1
Pdcd10
Arl2
Dennd1a
Coq8b
Ttc21b
Dhx32
Immp2l
Exd2
Dgkd
Slc30a9
Mgat1
H3c15
H3c14
Parp8
Col13a1
Mllt6
Ust
Utp14b
Acsl3
Hapln4
Vrtn
Cd24a
Cd63
Chn1
Maz
Usp37
Cnot9
Snn
Tab1
Sec22c
Ube2d1
Meaf6
Pygo2
Kcnn2
Hmgxb4
Hr
Dennd2c
Epn3
Zyg11a
Cct2
Nup85
Gcn1
Napepld
Rasgrp2
Tdh
Adam22
Slc46a3
Scrt2
Ttc9b
Nphp3
Asap1
Stc2
Cds2
Adamts20
Kmt2c
Ralb
Fam107a
Chst15
Actn1
Rtcb
Mical1
Phyhipl
Spink2
Car14
Tprn
Fam160b2
Tmem42
Coa4
Fgf4
Ttc22
Tnk2
Apoe
Gm4925
Arl1
Dgkh
Xpo6
Zfp839
Tle6
Tvp23a
Mapk3
Phf20
Gm3285
Adgra2
Spg20
Slc35f2
2300009A05Rik
Ndufa6
Csnk2a1
Tha1
Tfg
Rassf8
Eif4e
Sox2
Pcbp2
Spry2
Timm44
Fn1
Neil1
Spint1
Srpr
Foxred1
Slc25a36
Ptpn14
Hinfp
Rheb
Gm10318
Trim36
Fzd10
Hacd1
D3Ertd751e
Baz1b
Dctn4
Ppm1n
B3gnt2
Barx2
Fnta
Dcaf11
C2cd2
H3c11
Sec22b
Cep112
Tor4a
Ptdss2
Slc27a2
Pias3
Mylip
Crocc
Prkar1a
Trim68
Tubb5
Gabbr1
St6galnac2
Clip4
Per3
Klc3
Gpm6a
Togaram1
Klhl28
Zfand6
Tob1
Slc14a1
Pdk1
Fbp1
Vgll3
Sspn
Afap1l2
Sdc4
Klhl22
Npcd
Cbx6
Gm19668
Ppara
Ddb2
Neurog3
Parp12
Tcirg1
Proser1
Nhlrc3
Gm3739
Usp36
Pcbp1
Itga1
Slc39a7
Rxrb
Hsdl1
Dnaaf1
Trim8
Mafg
Faap20
Dipk1c
Tpm1
Mob1b
Nfatc3
Ptp4a2
Gm9222
Srd5a3
B4galt2
Prickle1
Steap3
Mad2l2
Draxin
Ptpn3
Irx2
Sbk2
Upp2
Acvr1
Rufy3
Plcb4
Rsph4a
Zfp286
Pyurf
Ost4
Pdrg1
Setx
Cic
Vsx1
Dus2
Ddx28
Tdrd3
Hcn1
Gapvd1
Nacc1
Ptch1
Trmt1
Nectin2
Cand2
Rprd2
Chd7
Kank2
Mob1a
Zfp24
Cacng2
Umad1
Rpa3
Cox5a
Cers2
Anxa9
Shcbp1l
Mllt1
Kctd9
Cdca2
Tbc1d9
Mtap
Lama5
Arhgap24
Nmnat3
Dvl1
Dab1
Dner
Csnk1a1
Ppm1a
Trp53bp1
G0s2
Zscan30
Shc4
Rtkn
Unk
Herc6
Gm2237
Slc9a3r1
Pkm
Slc40a1
Coro2a
Cluh
Srek1
Rps23rg1
Pik3cd
Castor1
2210016F16Rik
Mnt
Slc25a22
Ptpdc1
Sec31a
Hdgf
Ndfip2
Fahd2a
Abi2
Axl
Klf13
Ryr2
Trim13
Mettl9
Hells
Scaf11
Trip10
Atad2b
Dis3l
Bag3
Proser2
Alg9
Ggnbp2
Pdp2
Usp10
Caprin1
Hsp90ab1
Msrb2
Pdzd2
Ran
Rps29
Fam102a
Cachd1
Hjurp
A730008H23Rik
Numa1
Plekha7
Slc35d1
Esrp2
Phc2
Fbxo25
Cit
Hspb1
Igf2bp3
Icam1
Fam162a
Ccdc58
Zfp976
Chrna9
Polr2b
Noa1
Hhip
Mpc2
Dcaf6
Zfp996
Fgfr2
Denr
Prlr
Zhx1
Utp15
Ankra2
Cfap20dc
Kcnk9
Git2
Mrpl49
Fau
Mturn
Col27a1
Gtf3c4
Ddx31
Vti1b
Utp18
Mbtd1
Chst5
Zfp978
Tmem161a
Gabrb3
Zkscan5
Myrip
Cass4
Calm2
Csrp2
Clcn4
Fam149a
Polr3g
Mblac2
Kcnq2
Zfp280d
Zfp319
Usb1
Otud4
Gpcpd1
Tvp23b
Morf4l2
C1ql3
Malt1
Hes3
Pcolce2
Mtfr1l
Tef
Iqcc
Il17rd
Slc30a10
Avl9
Rgl2
Mboat1
Ncoa2
Gm3173
B3gnt4
Tmem178
Zfhx3
Plag1
Col2a1
D5Ertd579e
Kctd12
Csk
Kcnq1
Dhrs7b
Ubtd1
Mms19
Top3b
Adamts7
Sf3a1
Ccdc157
Ntng1
Mfap3l
Cux2
Gm9639
Sh3tc1
B230219D22Rik
Tnfrsf8
Bend3
Zfp385b
Csnk1g2
Pms1
Ormdl1
Slc35g2
Angptl4
Retreg1
Cacng7
Pard6g
2510009E07Rik
Setdb2
Gm45935
Cab39l
Fus
Pdzd4
Timm9
2700049A03Rik
Smim1
Socs2
Kcnip4
Gm17660
Gm3448
Gm3417
Otulin
Tcte3
Gm3435
Btla
Med4
Lig4
Mcat
Mettl14
Dab2ip
Ccdc194
Scgn
Epb41l2
Dap3
Celf4
Slc26a5
Zfat
Pnkd
Fignl1
Aamp
Atf2
Kbtbd2
Cmtr1
Slc13a2
Camkk1
Hmx3
Neil2
Mrps23
Unc5b
Foxp1
Elmod1
Ppp1r13l
Cd3eap
Cep63
Anapc13
Slc17a5
Rnf103
Hoxd3
Sntb2
Cenpm
Tfpi
Sap18b
Sap18
Rnf220
Slc22a23
Wiz
Gclm
Phf23
Hs3st4
Sh3pxd2a
Gm3233
Krtap10-10
Lpar2
Extl3
Pus3
Ddx25
Paip1
Bcl10
Rrbp1
Gm2696
Raph1
AI661453
1700001C19Rik
Mib1
Lypd6b
Tmem189
Psd3
Gm42517
Vav2
Akt2
Fbxl15
Cnot2
Sco2
Ece1
Rab42
Lsm2
Mybl1
Add1
Ubr7
Nos1ap
Gm9736
Mov10
Phldb1
Lgmn
Tmem200c
Smndc1
Epb41l3
Suz12
Recql4
Lrrc14
Tmem121b
Zfp217
Igfbpl1
Slc25a44
Map1lc3a
Tstd1
Nefh
Ap1b1
Slc66a2
Phlda3
Sf3b3
Cog4
Atf7
Mtf1
Spred1
Fam169b
Dll1
Cln5
Cenpb
Rell1
Nadsyn1
Dhcr7
Ano6
Kcp
Mxd3
Lsm14b
Efs
Slain2
Ahdc1
Rnaset2b
Pm20d2
Ap1g1
Srsf6
Ssh1
Nid2
Dnttip2
Uhrf2
Slc19a1
Slc25a24
Ddx3x
Ghitm
Rest
Oplah
Fam219b
Myef2
Gm3667
Sbno1
Krba1
Samd12
Afap1
Ttc28
Tmem170b
Lrrc8b
Smad6
Nadk2
Trmt61a
P3h2
Ccdc66
Mlf2
Gm14393
Kcnq3
Msra
Kmt2a
Robo1
Ppm1m
Phactr4
Adprh
Qser1
Dpf3
Klhl2
Tspan17
Gosr2
H2az1
Mamstr
Utp23
Nrros
Dmkn
9030025P20Rik
Plekhh1
6430571L13Rik
Mfsd13b
Cdr2
Naaa
Cst3
Sowahc
Septin10
Sox7
Fbxo30
Abl1
Cyp4x1
Gcnt4
Ipo8
Slc39a8
Actr1b
Tmem106c
Ehmt2
Tmem154
Snx15
Fam20b
Epb41l4b
Atp11a
Ngf
Ccnjl
Abca8b
Rcsd1
Ptdss1
Mterf3
Jade3
Klhl34
Ndufab1
Adra1a
3110082I17Rik
Cap1
Ap1g2
Mpc1
Syne2
Ppat
Paics
Ninj1
Ugp2
Ctdsp2
N4bp1
Ube2t
Gm3488
Dsn1
Prune1
Ago3
B4galt1
Sall4
Limk2
Lhx1
Yod1
Mapkapk2
Klf4
Npepps
Eif4g2
Dmwd
Kcng3
Jpt1
Rad51ap1
D6Wsu163e
Sun1
Ankrd6
Nfkb1
Csrnp1
Cxcl11
Epm2a
Btf3l4
Snap29
Pi4ka
Cped1