ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX12142046 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◢ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◢ SRX7546913: ES cells

◢ SRX7546914: ES cells

◢ SRX823607: ES cells

◣ SRX12142046: mESCs, differentiated

◢ SRX12142051: mESCs, differentiated

◢ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◢ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Txndc11
Alg14
Gm29733
Fgf5
Cldn34d
Scn5a
Gatad2a
Tcf20
Timp4
Cd38
Fcgr3
Urm1
Gm4861
Frem2
Eno1
Atrn
Slc25a4
Snrnp70
Kcna7
Zfp964
A930007A09Rik
Smc6
Gen1
Scap
Pabpc1
Cul5
Wrap53
Trp53
Enpp4
Olfr1163
Epha2
Ufsp1
Ache
Mecom
Letmd1
Pitx3
Gbf1
Pm20d2
Mkx
Lypla1
Clec2h
Olfr138
Colec12
Scamp2
Mpi
Man2a2
Irgm1
Ywhae
Tbc1d5
Gata4
Zcrb1
Pphln1
Zfp410
Slc9a1
Donson
Pmaip1
Abl1
Chka
Ginm1
Gid4
Prelid3a
Mcl1
Znrf1
Mycn
Slc7a7
Zfp428
Epha1
Wipi2
Apc
Mllt10
Pacsin2
Ints9
Hmbox1
Pou5f1
Itm2b
Grb2
Rbp7
Rbm47
Coro2a
Tmed7
Eif1a
Bmerb1
Rnf220
Chd1
Notch2
Faiml
Cep70
Plcxd1
Gtpbp6
Mup4
Spata24
Prob1
Otx2
Acp5
Fbxl7
Pxdc1
Qpct
Ptprz1
Prdm4
Smim8
Faim
Polg2
Ddx5
Cep95
Zfp980
Tmprss12
Atoh1
Slc37a3
Rab19
Lin9
Pdcd2
Lama1
Ctbp2
Lrrn4
Zfp937
Nwd1
Fbxo5
Tmem121
Tagln3
Irgm2
Dpp10
Nkiras2
Dnajc7
Olfr1028
Wsb2
Trabd
Abcd4
E030030I06Rik
Raet1e
Raet1a
H3c3
H2bc3
H1f2
Rbm17
Hinfp
C2cd2l
Galnt16
Zfp600
Gja1
Tal2
Tmem181a
Zfp9
Setd5
Rps6ka3
Efemp1
Coq2
Cd37
Slc6a16
Slc12a4
Ubtf
Arfgef1
Cfap300
Pdia3
Catsper2
Igdcc4
H2-DMa
Brd2
Frmpd1
Apbb2
Asxl1
Sema6a
LTO1
Thpo
Polr2h
Clcn2
Chrd
Mrpl23
Abl2
Rnf114
BC034090
Emb
Ddx20
Usp13
Ralb
Sfxn2
Arl3
Zfp979
Adnp2
Golm2
Uggt1
Mab21l1
Mbp
Ankrd36
Ms4a10
Zfp267
Zdhhc6
Vti1a
Klf5
Nsrp1
Dop1b
Gnai1
Msc
Tsga10
Lipt1
Elobl
Coil
Flywch1
Ifitm7
Anxa4
Zfp991
Zfp978
Mterf1b
Rtl8c
Ppp2ca
Mpig6b
Ly6g6c
Ddah2
Clic1
Elovl5
Wdr59
Tmem63a
Lefty1
H4c14
H3c13
H2bc18
Ephx2
Mterf1a
Zfp981
Exoc6b
Zfp442
Trim62
Tnni3
Dnaaf3
Atxn3
Sbk1
Snx6
Itpkc
Coq8b
Ptpra
Reep2
Tmco4
Rnf186
Kif5c
Uqcr11
Mbd3
Mios
B3gnt7
Nudt1
Ctxn2
Cstf1
Aurka
Sptb
G2e3
Deptor
Setd1b
Rhof
Sox1
Acpp
Rrp36
Mea1
Klhdc3
Esrrg
Trim33
Dmtn
Fgf17
Hoxa2
Sp5
Ncs1
App
Ncor2
Rnf125
Asah2
Naa16
Mtrf1
Tmem161a
Nedd4l
Mcidas
Ccno
Slc25a17
Gdpgp1
Cib1
Klhl1
Arl2
Nbea
Mapre2
Dync1i2
Ror1
Hnrnpll
Cdh5
Gprc5d
Teddm1a
Glul
Zbtb25
Zbtb1
Ubr1
Tmem62
Brms1l
Strn3
Ap4s1
Ndrg1
Rnf8
Prkag1
Il17rd
Ednrb
Glod5
Sh3rf1
Marchf7
Lhpp
3300002I08Rik
2300009A05Rik
Zfp36
Plekhg2
Smad7
Hoxb13
Zbtb22
Tapbp
Rgl2
Mmp25
Garre1
Rmi1
Hnrnpk
Mrc2
Kcnn2
Ano10
Sigmar1
Dctn3
Arid3c
Trappc1
Kcnab3
Cntrob
Lsmem2
Ifrd2
Ect2l
Cox5a
Hmga1b
Hmga1
AI413582
Spty2d1
Tmc7
Pou2f2
Vezt
Fgd6
Hif3a
Osbp2
Gjc1
Soga3
Commd4
Neil1
Zfp868
Mpped2
Pou2f1
Trh
Slc44a3
Rmnd5b
Arap2
Crb2
Flrt2
Pald1
Klhdc8b
Ccdc71
Slc16a9
Ccdc60
H3c15
H3c14
H2ac19
H2ac18
Espn
Myo10
Usp32
Arhgap32
P3h1
AU022252
Hook2
Junb
Pgrmc2
Mnx1
Mapk4
Mdm4
Mfap1b
Slco5a1
Tbc1d9
Chrac1
P3h2
Llgl2
Rpl12
Lrsam1
Phlpp2
Scd1
Mapk3
Gdpd3
Pde3a
Phc2
Mmp9
Prickle1
Prmt9
Ccdc30
Zmynd12
Ppcs
B3gnt4
Cryzl2
Ifitm1
Nat8f6
Nat8f5
Nrf1
Olfr813
Olfr812
Tdrd3
Pef1
Kdm2b
Ncdn
AU040320
Fam227b
Dtwd1
Mre11a
Ankrd49
1700012B09Rik
Abr
Cerkl
Marcks
Spata31
Cntnap3
Ptch2
Tmem63b
Mrpl14
Olfr1034
Coa7
Apoe
Apoc1
Ppp3cb
Pvr
Cacnb2
Fis1
Mllt6
Msh6
Usp37
Cnot9
Lhx5
Lrrc8d
Rnf213
Slc35f2
Cdkn2c
Ptdss2
Bahd1
Zfp64
Pdxdc1
Mpv17l
Asap2
Hivep2
Glra1
Slc19a3
Rpp14
Htd2
Fads1
Sh2d5
H3f3a
Smad4
Lrrn2
Rif1
Tmem59l
Crlf1
Slc26a8
Mapk14
Cdhr1
Tanc1
Gm7932
Cxxc5
Pramel13
Spint1
Ppp1r14d
Zfp976
Eps8
H2az2
Wdr61
Smim5
Meaf6
Tmem42
Tprn
Tmem203
Ssna1
Ndor1
Anapc2
Timm44
Exd2
T2
Rgs12
Amotl2
Frzb
Mt1
Mt2
Rtl8b
Glrx2
Pla2g7
Casc3
Rev3l
Lama5
Pelp1
Vrtn
Jakmip1
Cox7a2
Pms1
Ormdl1
Fahd2a
Slain2
Slc12a2
Snx16
Terf2
Gpsm2
Crocc
Smarca1
Bcl7b
Fgf8
Npm3
Fam214a
Krba1
Stc2
Obsl1
Inha
Sclt1
D3Ertd751e
Smim6
Bcl10
Rtn4rl1
Dph1
Syne1
Ssh1
Padi6
Duxbl3
Duxbl2
Duxbl1
Galnt12
Dcaf11
Poll
Dpcd
Kctd6
Pnrc1
Pcif1
Ptpn14
Fam50b
Snn
Olfr539
Ipo8
Ino80
Usp36
Lhfpl2
Zfp62
Vrk1
Pcmtd2
Pcgf6
Fstl1
Tmeff1
Mreg
Pes1
Septin1
Tbc1d10b
Mylpf
Spg20
Asap1
Olfr1339
Pum1
B4galnt2
Fnta
Epb41l1
1700122O11Rik
Rheb
Trappc5
Mcemp1
Fcor
Cma2
Usp44
Syt2
Ghitm
Epp13
Gngt2
Abi3
Ncoa1
Ago3
Tor3a
Tab1
Aktip
Mup6
Znhit2
Tm7sf2
Mrpl49
Fau
Axl
Smarcd1
Prl2b1
Ppp2r5b
Gpha2
Atg2a
Chgb
Hsdl1
Dnaaf1
Mllt1
Cpsf4l
Nkx2-5
Cacng7
Trim72
Chid1
Eomes
Ndufaf4
Zbtb7b
Lenep
Zfp341
Pxmp4
Tha1
Proser2
Iars2
Bpnt1
Cd9
Tfeb
Fgl1
Rps6ka5
Utp15
Ankra2
Tmem178
Cachd1
Slc25a22
Rplp2
Pidd1
Cend1
Ptk7
Pdgfd
Adam22
Rtkn
Dlc1
Foxj2
Abca8b
Eloa
Ppat
Paics
4930474N05Rik
Scaf11
Zkscan5
Zkscan14
Mboat1
Tulp4
Zfp119b
Yju2
Ebi3
B3gnt2
Stx11
Stk32a
Hs3st5
Slc9a3
Mthfd2l
Gpr162
Kif13b
Serpinf2
Dspp
Dhx32
Rab4a
Hdac1
Mrps15
Ss18l2
Sec22c
Kctd9
Cdca2
Cacng2
Ttc21b
Tcf7l2
Rplp0
Gcn1
Mapk8
Cep63
Anapc13
BC048679
Ap3b2
Hectd1
Ceacam13
Mzt1
Car14
Tmem131l
B4galt2
Atp6v0b
Dph2
Rbm45
Cyct
Zfp787
Il1rapl1
Dynll2
Fam118a
Trmt1
Nacc1
Foxa2
Tle4
Cyp51
Hcfc2
Glt8d2
Ccn2
Cpt1a
Serp1
Eif2a
Hnrnpa2b1
Cbx3
Pcbp1
Nphp3
Shoc2
Bbip1
Phf10
Cep112
Gm9736
Gm29802
Nyap1
Tsc22d4
2610528J11Rik
Capg
Krt42
Krt17
Set
Rps21
Pdrg1
Sphkap
2210016F16Rik
Usp10
Ugp2
Il17d
Dnajc10
Prex1
Cyp4x1
Ubtd1
Mms19
Mcf2l
Ptdss1
Mterf3
Numa1
Prss30
Fgf6
Tpd52
Tpm1
Cdkl2
Tor4a
Kctd12
Afp
Trip12
Fbxo36
Brinp1
Ptprg
Rassf7
Phrf1
Lmntd2
Epn3
Wnt3
Lrrc8b
Rsph4a
Pitpnm1
Cdk2ap2
Iqch
Aagab
Zfp39
Gdap1l1
Lzts2
Twnk
Mrpl43
Gli2
C1ql1
Btbd3
Defb5
Defb46
Cnn3
Kcnj6
Macroh2a2
Rest
Ralgds
Pum3
Ust
Ropn1l
Olfr829
Tgfbr3
Serpini1
Pdcd10
Parp6
Zfp784
Shc1
Flad1
Cks1b
BC107364
Fgd1
Bcl6
Adgra2
Ap2m1
Slc14a1
Epb41
Rps6ka2
Radil
Camk1d
Ttc9b
H6pd
Prkab1
Gimap3
Cdkn2aip
Yars2
Csnk2a1
Enpp3
Klc3
Ckm
Aff3
AB010352
Baz1b
Chrna9
Med16
Tchh
Actn1
Prkar1a
Tef
Psd3
Prmt8
Dmap1
Exosc6
Lamp1
Gapvd1
Ghr
Zyg11a
Ltb4r2
Ltb4r1
Cideb
Txndc12
Btf3l4
Sema4d
Trim25
Gmnc
Ksr2
Arhgap29
Adamts6
Rragc
Mmp15
R3hdm2
Inhbc
Pdp2
Cd24a
Olfr484
Malt1
Phf20
Coa4
Olfr212
Shroom3
Ccdc158
Dmrta2
Slc35d1
Cnbp
Utp14b
Acsl3
Cyp27a1
Slc5a6
Cad
Atraid
D5Ertd579e
Socs2
Zfp286
Stmn1
Zgrf1
Larp7
Msx1
Mad2l2
Draxin
Clasp2
5730409E04Rik
Gsx1
Spink2
Fhl3
Sf3a3
Rprd2
Eif4e
Slc4a2
Cdk5
6820408C15Rik
Zcchc3
Pcdh8
Pik3ip1
Wdr91
Ost4
Emilin1
Pcbp2
Ctrl
Mtfp1
Tbl1xr1
Cuedc2
Psd
Fbxl15
Rragd
Tmem229a
Tmem121b
Ube2d1
Olfr960
Cep55
Prol1
Sugt1
Capns2
Psmb10
Lcat
Nkx3-2
Cand2
Col5a1
C2cd2
Cfhr3
Tctex1d4
Plk3
Btbd19
Retreg1
Tmem198
Chpf
Sirt7
Mafg
Zfhx3
Suz12
Tbc1d4
Smarcd3
Utp23
Neil2
Tdgf1
Lrrc2
Sec22b
Jund
Iqcn
Cdh1
Ptch1
Ndufa4l2
Trim68
Stac3
Zfp423
Xpo6
Adnp
Speer4e
Shox2
Pnkd
Rsrc1
Faap20
Gpbar1
Aamp
Csrp2
Clcn4
Chst15
Hapln4
P4hb
Arhgdia
Mael
Cmtr2
Cnot2
Nectin2
Vti1b
Camk2n1
Ubr5
Map1lc3a
Tgfbr1
Tmem123
Rtcb
Tatdn3
Nsl1
Ubxn2a
Atad2b
Zdhhc20
Steap3
H2-T-ps
Pdpr
Pkm
Loxl3
Dok1
Hoxc13
Nfatc3
Epm2a
Speg
Srd5a3
Dab1
Mrgbp
Lpo
Tvp23a
Setdb2
Gm45935
Cab39l
L3mbtl2
Dennd1a
Dhrs7b
Gtf2a2
Fbp1
Pygo2
Pbxip1
Mtcl1
Nmnat3
Tcirg1
Ndufs8
Pllp
Trim7
Trim41
Pik3r3
Dmkn
Cltc
Nefh
Ap1b1
Mapkapk5
Rnaset2b
Rnaset2a
Zfp513
Snx17
Eif2b4
A330070K13Rik
Klhl34
Ppp6r1
Slc23a1
Moxd1
Lgmn
Gtf3c4
Olfr871
Smtn
Sowahc
Septin10
Sall4
Pdpn
Rock2
Ypel2
Ccdc9