ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9896071 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◢ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◢ SRX7546913: ES cells

◢ SRX7546914: ES cells

◢ SRX823607: ES cells

◢ SRX12142046: mESCs, differentiated

◢ SRX12142051: mESCs, differentiated

◢ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◢ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◣ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Speer4f1
Galnt11
Gmfb
Cgrrf1
Iqcf6
Amd2
Amd1
Chst14
Fgf13
Olfr960
Slc9a3
Mfap1b
Trappc9
Cep55
S100a16
Stk32c
Slc2a9
Zfp775
Plb1
Syt6
Cd38
Dtx2
Zp3
Galnt16
Nudt9
Wdr91
F5
Selenbp1
Gnai1
Siglec1
Tspan10
Nploc4
Hkdc1
Aqp9
Hid1
Igdcc4
Smpd5
Rassf4
Dbh
Ccer2
Fam107a
Fam214a
Vsig8
Slc7a9
Hip1
Zdhhc4
Cpne4
Zfp9
Gmnc
Dop1b
Gm8439
Dll4
Spint2
Ppp1r14a
Kcnma1
Neurog3
Mpst
Ginm1
Cyp2a5
Frat1
Med16
Ccdc30
Foxj2
Syce2
Mmp25
Fdxacb1
1110032A03Rik
Scn5a
Cmip
Tuft1
Apol10a
Mov10
Urm1
Pitx3
Gbf1
Cdh4
Dok7
Tcf20
Ctrl
Psmb10
Lcat
Spata31d1a
4921517D22Rik
Kif5c
Gpr4
Opa3
1700013H16Rik
Gm9736
Gm3233
Il21r
Gas7
Olfr138
Tbc1d9
Dand5
Gadd45gip1
Impdh1
Mrc1
Zfp428
Chrna9
Epha8
Kcnj12
Cldn34d
Med4
Myl2
Rpp40
Adamts18
Ccsap
Rnf125
Zfp607b
Map3k10
Mesp2
Ccdc6
Arap2
Nudt1
Mrm2
Gm3776
Myog
Agfg1
Ass1
Stra6
Eva1a
Grip1
Hsd11b2
Mrm3
Glod4
Sbk1
Fgf5
Gpr160
Fbp1
Sft2d2
Rtbdn
Mast1
Herc6
Sbf1
Adm2
Lhx5
Nrl
Cpne6
Coa7
Tox3
Tmc7
Ccna1
Gnaq
Serpinf2
Ncbp3
Cd47
Ubl5
Fbxl12
Slc25a4
Tbc1d16
Ccdc40
Cd37
Slc6a16
Gm29802
Grhl1
Gm29733
Spns2
Fgf15
Rptor
Gbx2
Slc36a4
Fut4
Ccdc63
Frmpd1
Uqcc1
Ywhag
Alg14
Espn
Pigk
Hes2
Tafa5
Rps6ka3
Pcmtd2
Coch
Col8a1
Gpr55
Ptgds
Paxx
Tprn
Tmem203
Ssna1
Ndor1
Anapc2
Pik3cd
Spata31d1b
Galnt15
Rbm17
Ttc7
Apol9b
Gm9639
Gm3250
Lpp
Gprc5d
Mydgf
Pnpla5
Arhgef4
Sema7a
Mrps17
Septin14
Spata5l1
AA467197
Snx32
Nol12
Lgals1
Frzb
Fgfr2
Npas2
Trmt1
Nacc1
Tenm4
Thpo
Polr2h
Clcn2
Unc5a
Jdp2
Cdc6
Slc25a47
Vezt
Fgd6
Fnbp1
Ankrd63
Mppe1
Rbm47
Omp
Acpp
Alpl
Ehd1
Lmo1
Ctbp2
Cpsf4l
Hinfp
C2cd2l
Sp8
Ppm1j
Tafa3
Scamp2
Mpi
Epha1
Scimp
Slc37a1
Klf6
Cx3cl1
Egln1
Dip2b
Marchf7
Uggt1
Tspear
Gm9508
Gm19402
Gm10272
Glra1
Man1c1
Klhl29
Rbm24
Kcnk9
Upb1
Nanos3
Sigmar1
Dctn3
Arid3c
Cnot2
Crtc1
Rbp1
Selenbp2
Wdr1
Stx11
Rtl8c
Susd2
Dnajc21
Abhd11
Kcnn2
Gm10100
Krtap12-1
Meiob
Igsf23
Glod5
Hes7
Aloxe3
Mtap
Wdr59
Gm45618
Zfp341
Pxmp4
Cd109
Zfp114
Ryr2
Syde2
Rnf220
Stx16
Slc22a6
Arfgap3
Smim5
Dscam
Tnfaip8l3
Mbp
Bmper
Kif26b
Slc7a7
Teddm1a
Glul
Trabd
Tgfbr1
Uchl4
F830045P16Rik
Htr1b
Pappa
Prr5
Wiz
Akap8l
Ptprcap
Gpr152
Coro1b
Cabp4
Sprtn
Exoc8
Nudt16
Lsm14b
Helt
Irgm2
Trak1
Tnfrsf8
Add1
Erfl
Fam149a
Abi2
Rab33b
Ocm
Trim62
Usp13
Abcd4
Duxbl3
Duxbl2
Duxbl1
Pdgfra
Clstn2
Gpr35
Cyp2a4
Foxp1
Mrpl23
Gm7932
Numa1
Ptprz1
Zkscan6
Ncor2
Wwc2
Asxl1
Enpp4
Mkx
Gm4861
Mex3a
Nudt18
Casd1
Flrt1
Zfp831
Capn5
Ccdc33
Atp6v1c2
Scrt2
Prdm4
Ascl4
Slc30a10
Macroh2a2
Tnf
Lta
Ltb
Cdh13
Nt5c
Erfe
Ttc4
Ankrd36
Flacc1
Mical1
Gm5820
Pdxp
Shroom3
Klf9
Myorg
1110017D15Rik
Brms1l
Fam110c
Irx1
Txndc11
Mall
Ndrg1
Pdlim2
Por
Atoh1
Ppp6r1
Rmi1
Hnrnpk
Mas1
Mrgprh
Mycn
Spring1
Rnft2
Fut10
Gm3285
Gm10318
Znrf1
Bend7
Limch1
Rbms1
Pcgf5
Sh2d3c
6330409D20Rik
Prss12
Zfp292
Cga
Zbtb42
Akt1
Timp4
Serpina12
Amotl2
Tmem98
Bmp4
Mrpl4
Meox1
Sulf1
Arsg
Slc16a6
Pde3a
Syt2
2900026A02Rik
Rtf2
Gm36176
Slc43a2
Mybph
Kcnh1
Fxyd5
Vps28
Slc39a4
Cpsf1
Tatdn2
Mapk4
Muc4
Frem2
Med27
Slc9a9
2700081O15Rik
Oxt
Avp
Dnah2
Efnb3
Stk32a
Pet117
Kat14
Sema6a
Slc16a9
Cxxc5
Mnt
Lrp3
Snrnp25
Il9r
Ccdc158
Rffl
Tm9sf4
Vhl
Svs1
Ncs1
Percc1
BC003965
Lrrc8c
Sdc1
Gngt2
Abi3
Gpr179
Tanc1
Dnaja4
Mecom
Rpl12
Lrsam1
Rsph1
B3gnt7
Triobp
Itgb3
Dact2
Pef1
Grik3
Serhl
Amn
Krt72
Pik3ip1
Stk32b
Smco4
Poln
Haus3
Gm8126
Lef1
Spg20
Nkx2-5
Mn1
Dkk3
Acacb
Lin9
Hoxb1
Cdh1
Pla2g7
Htr1d
Col13a1
Sfrp1
Kcns1
Olfm1
Fzd8
Nol4l
Ctdsp2
Galnt1
Fkbp2
Atp9a
LOC114841036
Vegfb
Trpt1
Nudt22
Dnajc4
Smc6
Gen1
Neurog1
Rspo1
Agpat5
Afp
Fgf8
Npm3
Phactr3
6430571L13Rik
Slc35e4
Eps15l1
Ppif
Ror2
Litaf
Slc9a3r2
Npw
Ppp3ca
Fgf6
Cuedc1
Atp11a
Grm4
Hs3st6
Hebp1
Gigyf1
Gnb2
Tacc2
Lhfpl2
Elmo1
Kdm4a
H2-T-ps
Asap2
Hgsnat
Syne3
Tsc22d1
Mcidas
Ccno
Teddm3
Ptk7
Gm3238
Lipe
Igsf8
Cabp7
Tal2
Ptprm
Ubtf
Trim36
Cyp26b1
Col27a1
Wfdc21
Heatr6
Rasgrp2
Cd160
Robo3
Ralgds
Mob4
Lysmd4
Ost4
Emilin1
Cd72
Plekhh3
Tubg2
Ube2d1
Fam53b
Agpat3
Aff1
Gucy1b2
Rbp7
Phf10
Sun3
Gm11992
H2bc6
H1f4
Dspp
Tead1
Selenom
Krtap10-4
Krtap10-10
Gadl1
Zc3h12d
Tox
Per3
Epha2
Prss30
Spdef
Fscn1
Zfp629
Mag
AB124611
Lhx1
Krt24
Fgl1
Kctd14
Hcn4
Rtl8a
Cpt1a
Epha5
Lrrc8a
Spata31
Cntnap3
Ppp1r36
Eps8
Shb
Bcl2
Kcnq4
Notch2
Zcrb1
Pphln1
Sh2b2
Fam107b
Pxdn
Tnrc18
Sox1
Abcb10
Tyro3
Proca1
Tmem220
Pax1
Fgf9
Chn1
Cngb1
Ubn2
Pigv
Adam33
Dab2ip
Slc35c2
Rtl8b
Nfil3
Spata24
Grid2ip
Galnt12
Arfgef1
Wnt11
Nefh
Ap1b1
Camk4
Ddx10
Clip2
Syna
Tnp2
Socs1
Prm3
Prm2
Zdhhc20
Kcnk2
Schip1
Acvr1c
Dusp5
Loxl4
Cmklr1
Speg
Slc35g2
Arid3a
Dhrs3
Plin3
Tfap2a
Sh3rf1
Osr2
Tmem256
Nlgn2
Inpp1
Set
Cd82
Gucy1b1
Pld6
Hnrnpu
Phldb1
Slc18a3
Chat
Hspbp1
Brsk1
Fmod
Mef2c
B3gnt8
Magi1
Ptpn3
Sh2d5
Angpt4
Shh
Rap1gap2
Rsad2
Nova1
Eps8l1
Rdh13
Best2
Nudt3
Trir
Get3
Tmem121
Spink2
Eloa
Cdc34
Gzmm
Mdm4
Septin3
Drd5
Rmnd5b
Acvr1
Scd2
Upp2
Vstm5
Kcnc2
En2
Pdzd3
Asah2
Jhy
Bsg
Hcn2
Plekhh1
Dlk2
Atp5g2
Wbp4
Elf1
Sesn3
Zfp60
Lamb1
Slc9a5
Fhod1
Lmod3
Cdkn1b
Tepp
Rbpj
Scube3
Lhpp
Nfix
Rapgef3
Gyg
Dpp10
Retnla
Ust
Xkr7
Rell1
Tgm5
Gbx1
Ints9
Hmbox1
Hs3st5
Casc3
Pip4k2a
Tsc2
Nthl1
Mpped2
Reep4
Hr
Map2k6
Pdzd2
Lypd6b
Csf3r
Tsc22d3
Atp2b1
Amotl1
Nmb
Timp3
Nckap5
Khdrbs3
Fez2
Hmga1b
Hmga1
AI413582
Slc28a3
Tgm4
Adgra2
Snx29
Gpa33
Tfap2d
Gatad2a
Sox2
Kitl
Crybb3
Crybb2
Nebl
Zfp91
Lpxn
Atp6v1e2
Ube2h
Dbn1
Vegfa
Hoga1
4933411K16Rik
Pld4
Vamp8
Ect2l
Nwd1
Scd3
Pkd2l1
Man2a2
Arhgef3
Med11
Tmem229a
Mif
Tle2
Srpx
Chrna7
Cd9
Rtn4rl1
Dph1
Csrp1
Mapkapk2
Armc4
Mab21l2
Ntsr1
Arhgef17
Zfp236
Cyp2d10
Galp
C4bp
Stk35
Ptch1
Fgf23
H3c3
H2bc3
H1f2
Rtkn
Mgat1
Sin3b
Myh11
Podn
Cer1
Nos2
Plekha8
Fkbp14
Pafah1b2
Hsbp1l1
Nptxr
Lama1
Hacd4
Gm45337
Gm39115
Pacsin1
Anks1b
Fyn
Calr4
Tmem145
Prr19
Pafah1b3
Csrnp1
Mrpl38
Anxa4
Ssbp3
Pou4f3
Ndrg4
Esam
Epm2a
S1pr5
Slc39a3
Diras1
Snorc
Pmaip1
Emb
Ctif
Arhgap30
Ddx60
Cox19
Cyp2w1
Egr3
Scube1
Syne1
Tcte2
Tex19.1
Uts2r
Ezh1
Trhr2
Fgr
Lingo2
Pdgfrb
Cdx1
Mcf2l
Gdap1l1
Hnrnpll
Lrrc55
Nudt4
Cdc20b
Pcolce2
Mark4
Exoc3l2
Nfe2l2
Ccnh
Wnt2b
Oacyl
Garnl3
Gosr2
Mast4
Aqp1
Plcb2
Adcy3
Ccdc12
Cdk19
Mdfic
Tpra1
Mcm2
Irf1
Fam171a1
Robo1
Zfp541
Serpine3
Tmem150b
Capg
Eid2b
Eid2
Kcnk15
Dda1
Mrpl34
Abhd8
Myo7a
Gadd45a
Smarca2
Brf1
Gjc1
Fam181b
Drd4
Aunip
Clba1
Ahnak2
Mtfp1
Ppp1r13l
Cd3eap
Srrm4
Tnfsfm13
Tnfsf12
Tnfsf13
Elfn1
Ercc1
Ncoa1
Cibar2
Mogat2
Asic2
Fam43a
Lsg1
Otop1
Grrp1
Gm30191
Zfp593
Mad1l1
Dmrtb1
Cachd1
Adad2
Fgd5
Hcn1
Itga3
Ccdc57
Slc16a3
Olfr959
Slc45a3
Ifngr2
Akap17b
Dbx2
Mmp21
Zfp672
Sh3bp5l
Dcc
1700122O11Rik
Ttc22
Zfp36
Plekhg2
Tle3
Plaat3
Hoxd8
Hoxd4
Hoxd3
Tjp2
Fam131a
Ror1
S1pr2
Tfpi
Pth2
Gfy
Prrc2b
Zfp267
Tulp4
Rabac1
AA986860
Clk3
Eomes
St6galnac2
Rab8a
Fam71b
P3h2
Il17rd
Ccl24
Atp1a2
Sprr2a2
Sprr2a1
Rxra
Ubqln1
Tmem131l
Sema4b
Vrtn