ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX12142055 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◢ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◢ SRX7546913: ES cells

◢ SRX7546914: ES cells

◢ SRX823607: ES cells

◢ SRX12142046: mESCs, differentiated

◢ SRX12142051: mESCs, differentiated

◣ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◢ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Txndc11
Cldn34d
Gm29733
Alg14
Ginm1
Gm9736
Gm29802
Gdap1l1
Ufsp1
Ache
Trabd
Gata4
Gm3233
Eno1
Igsf6
Car14
Atrn
Cd38
Myc
Dop1b
Man2a2
Add1
Gm9639
Gm3250
Mesp1
Rbp7
Zfp775
Capn2
Gatad2a
Arid3a
Timp4
Gm19668
Gid4
Letmd1
Znrf1
Macroh2a2
Ppp1r16a
Kifc2
Foxh1
Cyhr1
Fgfr2
Rnf220
Gm3285
Gm10318
Gm36176
Notch2
Tfpi
Coa7
Wrap53
Trp53
E030030I06Rik
Sh2d5
Donson
Prdm4
Lama1
Man1c1
Meox1
Gnai1
Igdcc4
Sbk1
Tbc1d5
Tmc7
Igsf8
Atp1a2
Galnt16
Pdgfra
Gm10100
Krtap12-1
Tor1b
Pabpc1
Zfp964
Tox3
Krtap10-4
Krtap10-10
Zfp532
Spata24
Prob1
Mapk3
Gdpd3
Vezt
Fgd6
Hdhd5
Apbb2
Ubtf
Abl1
Grin2c
Colec12
Smtnl2
Mn1
Ywhae
Smc6
Gen1
Nrp2
Cul5
Il17rd
Rxra
Frmpd1
Sparcl1
Asxl1
Setd5
Fcgr3
Cx3cl1
Tnni1
Mrpl23
Slc9a1
Mkx
Rbm24
Inf2
Ints9
Hmbox1
Ddx20
Klhl1
Pik3ip1
Ptch1
Hcfc2
Glt8d2
Nudt1
Susd2
Acp5
Raet1e
Raet1a
Tspear
Gm9508
Gm19402
Gm10272
Dleu7
Pacsin2
Slc26a8
Mapk14
Zfp410
Tenm4
Ccdc102a
Adgrg5
Atoh8
Mrc2
Efcc1
Chd1
Marchf7
Grid2ip
Rtkn
Wdr54
1700003E16Rik
Irgm2
Coq2
Arfgef1
Snx6
Prelid3a
Hoxb1
Arl2
Ptprz1
Lef1
Kcna2
Scamp2
Mpi
Lrig3
Mios
H2bc6
H1f4
Ndufaf4
Rasgrp3
Prr5
Flywch1
Clip4
Pcp4
Scn5a
Fgl1
Hnrnpll
Chst15
Pigv
Ptpra
Tdrd3
Gm4861
Qpct
Prrx2
Fbxl7
C4bp
Mpig6b
Ly6g6c
Ddah2
Clic1
Gse1
Sfxn2
Arl3
Ect2l
Speer4e
Wdr59
Grb2
Zfp9
Lamb3
Phlpp2
Gfra2
1700122O11Rik
Srrm4
Foxp1
Adad2
Usp13
Tagln3
Elovl5
Hsd11b2
Apc
Sp5
Sclt1
D3Ertd751e
Ifitm1
Dbh
Urm1
Tmem121b
Zdhhc6
Vti1a
Tulp4
Gm9507
Gm2696
Adgra2
Fbxo5
Mllt10
Prkag1
Pcif1
H3f3a
Tmem121
Marcks
Itm2b
Spty2d1
Epb41
Acot11
Mapre2
Mpped2
Enpp4
Arhgap32
Nostrin
Adnp2
Atoh1
Pdia3
Catsper2
Meis3
Sorbs3
Gmnc
Mrc1
Prdm1
Gdpgp1
Cib1
Faim
Pou2f2
Terf2
H3c3
H2bc3
H1f2
Zfp975
Plekha7
Teddm1a
Glul
Ptch2
Ppp2r5b
Gpha2
Atg2a
Calr4
Krtap3-3
Krtap3-2
Krtap3-1
Ncoa1
Ptf1a
Chrac1
Slc12a4
Uqcr11
Mbd3
Iqch
Aagab
Exoc6b
Rnf114
2300009A05Rik
Rassf7
Phrf1
Lmntd2
Stra6
Casz1
Abl2
Ubr1
Tmem62
Nkiras2
Dnajc7
Tanc1
Frzb
Ano10
Gpsm2
Slc11a1
Wbp4
Elf1
Kmt5c
Cox6b2
Apool
Kcnma1
Gm3238
Polg2
Ddx5
Cep95
Pbk
Arg1
Acvrl1
Prickle1
Gpr179
Omp
Zfp976
Sh3rf1
Ugp2
Hipk2
Col13a1
Wdr91
Septin8
Pou4f1
Setd1b
Rhof
Foxj2
Abca9
Sort1
Wipi2
Olfr138
Il6ra
Hoxb3
Hoxb2
Plb1
Septin1
Tbc1d10b
Mylpf
Ndrg1
Ssh1
Igdcc3
Nbea
Cacng2
Cdkn2aip
Ppp2ca
Actn1
Mdga1
Ccn2
Tmem63b
Mrpl14
Atxn3
Tff3
Pdcd2
Pxdc1
Coro2a
Phf10
Rnf125
Ptk7
Arhgap42
Fam227b
Dtwd1
Mthfd2l
Lrrfip1
Mapk8
Obsl1
Inha
Zfp91
Lpxn
Slc37a3
Rab19
Klf5
Zbtb22
Tapbp
Rgl2
Zbtb25
Zbtb1
Tsga10
Lipt1
Fam117a
Ccdc186
Hes7
Aloxe3
B3gnt2
Dynll2
Ypel1
Duxbl3
Duxbl2
Duxbl1
Pum1
Cachd1
Tmco4
Rnf186
R3hdm2
Inhbc
Fads2
Ncdn
AU040320
Nedd4l
Tmem119
Rheb
Dlc1
Arap2
Pgrmc2
Nova1
Hoxa2
Acta1
Ralb
Rprml
Lyzl6
Tle4
Mllt1
Slc14a1
Hs3st3a1
Garnl3
Appl2
Vsir
Flacc1
Dennd1a
Tef
Fstl1
Fnta
Prl2b1
H2az2
Elobl
Coil
Pdxdc1
Mpv17l
Lzts2
Twnk
Mrpl43
Fbp1
Olfr539
Stc2
Serpina12
Elmo1
Csrp2
Efna3
App
Trappc5
Mcemp1
Fcor
Garre1
Faiml
Cep70
Rpp14
Htd2
D5Ertd579e
Slc25a44
Ednrb
Ext1
Erc1
Pdp2
Lefty2
Spink4
Mecom
Brinp1
Zfp277
Dock4
Smad7
Sema6a
Slc16a9
Mab21l1
Snai1
Calu
G2e3
Cyp2a5
Pnrc1
Tmed7
Eif1a
Cxxc5
Ywhag
Lin9
Cd24a
Sod3
Gas1
Cacng7
Spry2
Ccdc30
Zmynd12
Ppcs
Cox5a
Tbc1d9
Rad52
Pde3a
Zfp868
Golm2
Zkscan5
Zkscan14
Pum3
Ppp2r3a
Tmprss12
B4galt2
Atp6v0b
Dph2
Tcf7l2
Speg
Adcyap1
Zfp36l2
Tgfbr1
C1ql1
Tmem42
Thpo
Polr2h
Clcn2
Chrd
Lfng
Znhit2
Tm7sf2
Mrpl49
Fau
Abca8b
Igsf23
Dach1
Got2
Cpox
Prnp
Prn
Naa16
Mtrf1
Slc18a3
Chat
Mreg
Chid1
Usp32
Accs
Rtcb
Kif5c
Spg20
Tmub1
Agap3
Fastk
Adnp
Sh2d6
P3h1
AU022252
Nhsl2
Bcl7b
Rpl37a
Brms1l
Parp6
Smarcd3
Trappc1
Kcnab3
Cntrob
Pkm
Lima1
Flrt2
Hmga1b
Hmga1
AI413582
Eif4e
Snn
Rest
Ebf2
Asap2
Hnrnpa2b1
Cbx3
Pdpr
Wdr61
Pald1
Slc13a1
Rbm47
Adamts20
BC034090
Atp1b2
Dnajc10
Ccdc60
Bcl10
Lrrc8d
Proser2
Cfap300
Pax3
H3c15
H3c14
H2ac19
H2ac18
Soga3
Vrk1
Inafm2
Phc2
Foxf1
Trmt1
Nacc1
Dtx1
Pitx3
Gbf1
Rcsd1
Hapln4
Neurog3
Zfp62
Tmem229a
Mdm4
Tnnc1
Sema3g
Nkx2-5
Epb41l2
Uaca
Mterf1a
Fn1
Msra
Btbd3
Setx
Slc44a3
Gna14
Ulk3
Cplx3
Epn3
Retnla
Shroom3
Ccdc158
Cpt1a
Asap1
Gpr160
Fgf6
Prom1
Hgsnat
Thsd7a
Tha1
Snrnp70
Abr
Trim36
Fscn1
Zfand6
Rbms1
Krt40
Reep2
Lrrc38
P3h2
Fam178b
Cox5b
Ctdsp2
Slc43a2
Gk5
Ap1g2
Cyth1
Olfr893
Cand2
Ccdc66
Tmem131l
Tab1
Mad2l2
Draxin
Lrp2
Hook2
Atg5
Mtfp1
Ptdss2
Chga
Spag4
Dusp4
Stx11
6820408C15Rik
Zcchc3
Kcnq3
Caps2
Glipr1l3
Clcn4
Sugt1
Tgfb2
Shoc2
Bbip1
Gm7932
Hdac1
Ehd1
Zhx1
Rmi1
Hnrnpk
Lpgat1
Ankdd1b
Kdm2b
Ntn1
Iqcf6
Cxxc4
Rnase4
Ang
Cdyl
Glra1
Tcf20
Ppp1ccb
Ppp1cc
Rhox4a
Pcdh19
Raph1
Cers3
Glis2
Pcgf6
Kctd9
Cdca2
Gm2237
Togaram1
Klhl28
4931429L15Rik
Dcaf11
Ptpn14
Kctd12
Prtg
Sun1
Nwd1
H4c14
H3c13
H2bc18
AA414768
Krba1
Pbx1
Kmt2a
Csrp1
Prmt9
Flnc
Neurl1a
Gm11559
Gm11568
Krtap9-1
Rnf8
Aktip
Atp1a1
Nit2
Usp37
Cnot9
Cuedc2
Psd
Fbxl15
Zfp286
Neil1
Nphp3
Tmcc2
Lamb1
Shc1
Pygo2
Pbxip1
Dupd1
Fbxw4
Bloc1s5
Cd37
Slc6a16
Ttc21b
Ptpdc1
Ssbp2
Mlxip
Slc22a6
Prkab1
Clasp2
Armc4
Ncor2
Usp36
B3gnt4
Tpm1
Gm867
Vpreb3
Lhx1
Trim68
Jak2
Itpkc
Coq8b
Mterf1b
Gna13
Gm17660
Smarce1
Lifr
Phf20
S1pr5
Gsx1
Dab2ip
Hectd1
Mob4
Rnaseh2b
Glrx3
Schip1
Per3
Ct55
Col26a1
Trio
Epha2
Umad1
Rpa3
Nkx2-2
2510009E07Rik
Mamstr
Foxo6
Aff1
Casc3
Utp15
Ankra2
Angpt4
Nudt9
Zbtb18
Pdik1l
Axin2
Mapk4
Slc25a47
Pvr
Zfp687
Ncoa2
Raf1
Rrm2
Grip1
Slc35g2
Slc36a4
Camta2
Meis1
Sirt7
Mafg
Tbc1d4
Ulk2
Wnt2
Zfpm1
Rmdn1
Cpne3
Gm10267
Btbd7
C2cd2
Krtap4-16
Gbx2
Sf3a1
Ccdc157
Serpini1
Pdcd10
Map3k20
Slain2
Adck5
Slc7a7
Scrt2
Bcl6
Tmem239
Cpxm1
1700020A23Rik
Ralgds
Col5a1
Lrrn1
Pkn2
Zfp319
Usb1
Sowahc
Septin10
Hes6
Mbp
Trip10
Gpr108
Zfp787
Rad51ap1
D6Wsu163e
Vdac3
Cand1
Mogat2
Epha5
Pax7
Dph5
Arhgap6
Pm20d2
Trerf1
Hsbp1l1
Dctn4
Slc66a2
Mycbp2
Zdhhc2
Epha4
Nkx3-2
Clcn7
Mansc1
Borcs5
Foxa1
Zdhhc20
Sall4
Zfhx3
Fahd2a
Rbpjl
Matn4
Tlr2
Scd1
Slc25a22
Rplp2
Pidd1
Cend1
Akt2
Ankrd36
Dtnbp1
Slc12a2
Lgmn
Zfp35
Fjx1
Ust
Mical1
Scaf11
Ghitm
Zbtb12
Ehmt2
Mthfd2
Mob1a
Greb1
Pfkfb2
Yod1
Dpf3
Jade1
B4galt7
Tmed9
Sigmar1
Dctn3
Arid3c
Pcmt1
Lats1
Osr1
Itga10
Tspan2
Gpr142
Pik3r3
2700081O15Rik
Brwd1
Dbx2
Epha1
Exd2
Adm
Mzb1
Plekhh1
Zeb2
Nebl
Olfr1339
Ppm1j
Tafa3
Syt2
Itgb7
Triobp
Mfap3l
Gm20346
Anp32a
Ppdpf
Ndnf
Fbrsl1
Immp2l
Msh5
Msh6
Hmx3
Hmx2
Soat1
Oacyl
Zmynd8
Tbl1xr1
Slc4a2
Cdk5
Dgkh
Cd209a
Xrra1
Spcs2
Alox8
Sulf1
Tmem161a
Fbxo11
Taf6l
Polr2g
Coa4
Cited2
Hoxb13
Kcnj4
Lrrc4b
Tal2
Pdrg1
Srd5a3
Cd47
Septin2
Hdlbp
Onecut2
Rab4a
Scd2
Epop
Mt1
Mt2
Rab11fip1
Smarca1
Dmap1
Nynrin
Otud4
Foxa2
Fbxl19
Rnasek
Bcl6b
0610010K14Rik
Wnt2b
Timm50
Dll3
Rdh5
Cd63
Sdc4
Smtn
Msx1
Kcnn2
Picalm
Slc31a1
Fkbp15
Cfap20dc
2310022B05Rik
Rybp
Wdr86
Ntng1
Grk2
Cort
Spint1
Ppp1r14d
Tcirg1
Ndufs8
Slc25a24
Coch
Lrrc10
Sorcs3
Tnfrsf9
Park7
Pramel13
Syne2
Cct2
Pde5a
Pelp1
Mylip
Napepld
Mmp15
Socs5
Aaas
Afap1
Oxct1
Setdb2