ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7546913 | ES cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◢ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◣ SRX7546913: ES cells

◢ SRX7546914: ES cells

◢ SRX823607: ES cells

◢ SRX12142046: mESCs, differentiated

◢ SRX12142051: mESCs, differentiated

◢ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◢ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Alg14
Txndc11
Znrf1
A930007A09Rik
Letmd1
Slc25a4
Cldn34d
Frmpd1
Ncdn
AU040320
Slc15a1
Frem2
Bmerb1
Ifitm7
Pabpc1
Vezt
Fgd6
Mup4
Wrap53
Trp53
Acp5
Tmem181a
Gatad2a
Setd5
Cd37
Slc6a16
Prdm4
Ascl4
Urm1
Chka
Gja1
Gm29733
Mcl1
Atrn
Wsb2
Zfp428
Man2a2
Scn5a
Ino80
Nedd4l
Gid4
Lama1
Rragc
Cd38
Zfp710
Asxl1
Kif17
Rheb
Eno1
Colec12
Nphp3
D630039A03Rik
Wdr59
Zcrb1
Pphln1
Spata24
Prob1
Atxn3
Zfp964
Prkci
Uqcr11
Mbd3
Rcor2
Ywhae
Trim72
Arfgef1
Coro2a
Epha1
Gm4861
Defb5
Defb46
Exoc6b
Rnf213
Rif1
H3f3a
D5Ertd579e
Chd1
Tmed7
Eif1a
Ccdc30
Zmynd12
Ppcs
Klf5
Lypla1
Setd1b
Rhof
Apbb2
Trim25
Abl1
Terf2
Arl2
Timp4
Prkag1
LTO1
Mllt1
Hoxa2
Rnf114
Mllt6
Cd9
Smc6
Gen1
Lrrc8b
Pacsin2
Pou2f2
Tbc1d5
Snx15
Sac3d1
Ndufa4l2
Stac3
Fgd1
Ufsp1
Ache
E030030I06Rik
Ubr1
Tmem62
Tulp4
Sfxn2
Arl3
Nutm2
Tagln3
Hinfp
C2cd2l
Otx2
Myo10
Epha2
Rnf125
Olfr90
Dynll2
Fcgr3
Atg5
Rmnd5b
Mtcl1
Mios
Ceacam13
Rpp14
Htd2
Slc12a4
Adgra2
Rybp
Slc9a1
Rassf8
Tmprss12
B3gnt7
Apc
Hoxb13
Pum3
Dnttip2
Cep63
Anapc13
Flywch1
Pvr
Slc37a3
Rab19
Hook2
Prnp
Prn
Notch2
Donson
Togaram1
Klhl28
Qpct
Rab37
Slc9a3r1
Spag4
Znfx1
Abcc4
Mycn
Slc26a8
Mapk14
Ptch2
Slc7a7
Llgl2
Mreg
Mrps15
Rrp36
Mea1
Klhdc3
Spef1
Cenpb
Cdc25b
Zfp410
Pcgf6
Cluh
Polg2
Ddx5
Cep95
Gpr162
B3gnt4
Agtrap
Gne
Parp12
Dhx32
Ankle2
Pef1
Sox1
Zdhhc6
Vti1a
Umad1
Rpa3
Isl1
Ptprz1
Thpo
Polr2h
Clcn2
Chrd
App
Hnrnpdl
Enoph1
Usp5
Cdca3
Mettl21a
Tlx2
Pcgf1
Lbx2
Tfeb
Radil
Ccn2
Ubr5
R3hdm2
Inhbc
Nefh
Ap1b1
Hic1
Ovca2
Ptms
Lag3
Nwd1
Tmco4
Rnf186
Stmn1
Ptpra
Faiml
Cep70
Ddx20
Grb2
Dcaf11
Enpp4
Mrpl23
Prkar1a
Ano10
Chrac1
Nadsyn1
Dhcr7
Cds1
Pdcd2
Cpsf4l
Sptb
Cerkl
Vrk1
Tprn
Tmem203
Ssna1
Ndor1
Anapc2
Rps10
Ints9
Hmbox1
Mpig6b
Ly6g6c
Ddah2
Clic1
G2e3
Ift140
Cramp1l
Fahd2a
H2az2
Ralb
Cmas
Glis2
Zscan10
Zfp13
Abl2
Nkx2-6
Glrx2
Rbm47
Kcnj6
Gipc1
Ptger1
Fbxo5
Ndrg1
Tmem131l
Pdpk1
Nodal
Cd300lg
Ppp1ccb
Ppp1cc
Klrb1b
Greb1
Dpf3
Ms4a10
Smad6
Cfl1
Slc35f2
Soga3
Olfr1339
Lrrn2
Pcif1
Gpld1
Aldh5a1
H3c3
H2bc3
H1f2
Ppp2r3a
Usp37
Cnot9
Gdap1
Chid1
Grhl3
Znhit2
Tm7sf2
Mrpl49
Fau
Adnp2
Smim8
A630095N17Rik
Dnajb2
Tuba4a
Cecr2
Col26a1
Rnf122
Cuedc1
P3h1
AU022252
Mt1
Med12l
Snrpg
Fam136a
Dgkd
Cbll1
Castor1
Zfand6
Slc17a5
Tbc1d9
Hspb1
Mrc2
Hmga1b
Hmga1
AI413582
Phf12
Picalm
Coq2
Faim
Rab4a
Slc4a2
Cdk5
Lef1
Dnmt3a
Tdrd3
Etv6
Mterf1a
Ccdc9
Atoh1
Snn
Tvp23a
Ppp2ca
Mkrn2os
Mkrn2
Lax1
Irgm1
Plcxd1
Gtpbp6
Pfkfb2
Yod1
Zfp9
Sclt1
D3Ertd751e
Mael
Trappc5
Mcemp1
Fcor
Arhgap32
Hdac1
Ust
Grid2ip
Tmeff1
Baz1b
Shc1
Gsx1
Pygo2
Pbxip1
Phyhipl
Tmtc4
Prelid3a
Cdkl2
Lifr
Tbx3
Wbp11
Smco3
BC049715
Pdlim5
Mapk4
Cmip
Timm44
Prss8
Aoc3
Aoc2
Hipk2
Trabd
Atp2c2
Pnkd
Gpbar1
Aamp
Parp6
Serpini1
Pdcd10
Hmgxb4
Pitpnm1
Cdk2ap2
Tom1
Ect2l
Slc31a1
Fkbp15
Cdkn2aip
Ttc28
Foxd2
Gpbp1
Zhx1
Fbrsl1
Asap2
Dlc1
Lama5
Zbtb25
Zbtb1
Mterf1b
Ido1
Slco5a1
Foxf1
Cul5
Cd47
Zdhhc2
Zbtb8a
Max
Glra3
Mup6
Tmem151b
Klhdc8b
Ccdc71
Kcnj4
Cds2
Pdp2
Dhrs7b
Shoc2
Bbip1
Lsmem2
Ifrd2
Steap3
Jade2
Fam161a
Tha1
Bcl6
Cox8b
Tmem235
Axin1
Dnase2a
Klf1
Gcdh
Fignl2
Racgap1
Mnx1
Tet1
Slc12a2
Fbxo34
Casc3
Ghitm
Hsdl1
Dnaaf1
Mturn
Tgm1
Rabggta
Glod5
Ndrg4
Sh3rf1
D030056L22Rik
Cdc45
Nr2f6
Ushbp1
Snx10
Ptpn14
Arap2
Rtcb
Flrt2
Sbk1
Plekha7
Sbk3
Sbk2
Rnf220
Rpl12
Lrsam1
Scaf11
Def6
Kctd6
Caprin1
Msc
Akt2
Uggt1
Slc5a1
Elobl
Coil
Poc1b
Galnt4
Atp1a1
Spred1
Ghrh
Reep5
Mrps35
Unc5b
Tcea3
Rap2a
Smyd4
Rpa1
Fubp3
Wnt3a
Mib2
Exd2
Fam118a
Gprc5a
Slc16a9
Pxdc1
Cltb
Rapgef1
Marchf7
Mab21l1
Smad4
Uhrf2
Coa4
Cdhr1
Sp2
Bcl10
Syne2
Pik3r3
Ywhag
Pdrg1
Slc25a22
Rplp2
Pidd1
Cend1
Gja4
Kpnb1
Zfp868
Jund
Iqcn
Vstm2l
Akr1b8
Elovl2
Il17rd
Cdc16
Sigmar1
Dctn3
Arid3c
B3gnt2
Dis3l
Tpcn2
Garre1
C1ql1
Asap1
Chn1
Apoe
Apoc1
Ror1
Spty2d1
Pdia3
Catsper2
Hey1
Tsga10
Lipt1
Rest
Gjc1
Ssh1
Timm9
2700049A03Rik
Tecpr2
Cinp
Txndc12
Btf3l4
Zfp991
Zfp978
Smad7
Smarce1
Tctex1d4
Plk3
Btbd19
Ginm1
Camk2n1
Frg2f1
Foxj3
Fam227b
Dtwd1
Pigk
Nfyb
Pmaip1
Slc22a17
Mapkapk5
Ntng1
Xpo6
Galnt16
Raet1e
Raet1a
Iqch
Aagab
Recql4
Mfsd3
Lrrc14
Zdhhc20
Percc1
BC003965
Unkl
Ahdc1
Epp13
Vdac3
Ptdss1
Mterf3
Cep192
Dus2
Ddx28
Nkiras2
Dnajc7
Pitx3
Gbf1
Ctbp2
Ccdc60
Jarid2
Ephb3
8030462N17Rik
Tmem42
Nfix
Epha4
Dop1b
Prrc2b
Nkx2-5
Dmap1
Rnf103
Dyrk4
Mxra8
Dvl1
Hcfc2
Glt8d2
Fam53b
Sema4b
Usp36
Slc25a1
Rexo1
Rev3l
Anxa4
Zfp36
Plekhg2
Zfp36l2
Pcbp2
Ankrd6
Akip1
Zkscan17
Klhl2
Zfp976
Tbl1xr1
Csn1s2a
Dab1
Clasp2
Fignl1
Poll
Dpcd
Zfp217
Hpgd
Bhlhe40
Cd300e
Mpzl1
Cnot11
Cldn14
Rpl17
BC031181
Ubc
Tmem200c
Limk1
Macroh2a1
Map7d1
Map1s
Nuak2
Klhdc8a
Myorg
1110017D15Rik
Tiparp
Tufm
Sh2b1
Tmc8
Tmc6
Itm2b
Arhgap42
Brinp1
Lpgat1
Ninj1
Ccdc134
Slc13a2
Cacng2
Oplah
Ube2d1
Tpd52
Slc27a2
Crocc
Rbp7
Actr10
Cst3
Lgmn
Trmt1l
Swt1
Atad3a
Olfr871
Zfp982
Nup85
Tbx20
Gzme
Msra
Mt2
Fndc3b
Arf2
Arhgap19
Nsf
Trim7
Trim41
Klf11
Clec2h
B4galt2
Atp6v0b
Dph2
Fads1
Setdb2
Gm45935
Cab39l
Ncoa1
Pycr1
Myadml2
Atg16l2
Stard10
Ap2m1
Prom1
Slc7a6os
Prmt7
Shroom3
Ccdc158
Itpkc
Coq8b
Gli2
Chmp4c
Tlx1
Zbtb45
Trim28
Ubfd1
Ears2
Mecom
Junb
T2
Tent5c
Orai1
Mllt10
Setx
Hif3a
Enpp3
Hcn4
Ap1g2
2510009E07Rik
Sfn
Spx
Vim
Wipi2
Rabggtb
Msh6
Smarcd3
Csde1
Rps21
Wiz
Mtmr12
Mdm4
Cuedc2
Mtfr1l
2210016F16Rik
Psd
Fbxl15
Mtarc1
Socs2
Pnrc1
Rassf7
Phrf1
Lmntd2
H2-M5
Tle2
Zfp57
Spast
Fam178b
Cox5b
Fam102a
Pde3a
Cic
Gna13
Lrrn4
Utp15
Ankra2
Cand1
Zbtb34
2700081O15Rik
Ccpg1os
Ccpg1
Tmem170b
Zfp513
Snx17
Eif2b4
Zfp532
Srd5a3
Gadd45a
Col5a1
Cdk13
Zfp64
Slc14a1
Naa16
Mtrf1
Trcg1
Stk38
Zfp72
Klhl13
Wnt16
Sms
Ptges2
Lcn2
Set
Kcnma1
Suclg2
Rad51ap1
D6Wsu163e
Wdr34
Ppp2r5b
Gpha2
Atg2a
Rtn4rl1
Dph1
Tmem51
Gpcpd1
En2
Abcc1
Macroh2a2
Plxna1
Tmem199
Sebox
Poldip2
Igfbpl1
Prrt4
Rbm28
Asah2
Iqgap2
Nipsnap1
Tcl1
Zfp663
Mnt
Trmt61a
Ckb
Midn
Atp5d
Gm36210
Hnrnpa2b1
Cbx3
Lpar2
Flnc
Zscan18
Mfsd13a
Tubgcp6
Hdac10
Pm20d2
Crb2
Adamts7
Nfatc3
Tab1
Abca8b
Dok5
Pdha1
BC107364
Unk
H3f3b
Mettl9
Sh3gl3
Kcnt1
Gdap1l1
Sntg1
Egln1
Afg1l
Tada3
Arpc4
Meaf6
Ppfia1
Pou3f3
Igdcc4
Ctr9
Cd55
Aktip
Suz12
Ttc9b
Hes3
H3c15
H3c14
H2ac19
H2ac18
Phf11d
Ppp2cb
Olfml2b
Golm2
Enah
Nanos3
Trim8
Swsap1
Plppr2
Pgrmc2
Zfp36l1
Mfap3l
Rpp38
Acbd7
Pkm
Shh
Pus3
Ddx25
Elovl5
Vps28
Slc39a4
Cpsf1
Nyap1
Tsc22d4
Cct2
Ube2v2
Pex5
Usp13
Olfr1034
Sirt7
Mafg
Lpo
Chd7
Dpf1
Bcap31
Abcd1
Tex45
Pex11g
Ccdc136
Mib1
Map2k5
Pgd
Fnta
Itga9
Notum
Adam12
Aspscr1
Sp5
Stx11
Tigar
Col27a1
Rpp40
Gpsm2
Ppia
Olfr212
Tigd5
Eef1d
Plekha8
Fkbp14
Wscd2
Dmrtc2
Rps19
Nrros
Lypd4
Klc3
Ckm
Afp
Cdr2l
Spata7
Fosl1
Ccdc85b
Cfap300
Plcb4
Srpr
Foxred1
Brms1l
Trmt9b
Rax
Denr
Scap
Psma6
Cort
Per3
Ctif
Hectd1
Cenpa
Psmd3
Mbp
Tmem121
Dll4
Uhrf1bp1
Mier2
Tanc1
Mzt1
Ptch1
Cspp1
Cops5
Phlpp2
Vgll3
Cers5
Foxp1
Smim1
Mrpl58
Ssr1
Atp5h