ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7546911 | ES cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◢ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◣ SRX7546911: ES cells

◢ SRX7546912: ES cells

◢ SRX7546913: ES cells

◢ SRX7546914: ES cells

◢ SRX823607: ES cells

◢ SRX12142046: mESCs, differentiated

◢ SRX12142051: mESCs, differentiated

◢ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◢ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Slc25a4
Tmem181a
Cd38
Gm29733
A930007A09Rik
Ubr5
Gatad2a
Alg14
Zfp991
Zfp978
Lsmem2
Ifrd2
Mycn
Acp5
Slc15a1
Gli2
Lrrn2
Urm1
Ino80
Lypla1
Zfp982
Bmerb1
Mup4
Olfr52
Olfr1044
Onecut2
Ceacam13
Usp48
Txndc11
Ufsp1
Ache
Cerkl
Hnrnpdl
Enoph1
Pef1
Serpini1
Pdcd10
Tfcp2l1
D030056L22Rik
Myo10
Otx2
Frem2
Mib2
Spata24
Prob1
Defb5
Defb46
Cd9
Zfp710
Timp4
Zfp428
Rnf213
Tbx3
Rps6ka5
Tmem51
Zgrf1
Larp7
Epha2
D630039A03Rik
Rcor2
Olfr1339
Qpct
Sema4b
Mybph
Chil1
Scn5a
Mfap1b
Socs3
Tctex1d1
Setd5
Ceacam2
Tigar
Gjc1
Kif13b
Prkci
Cdh1
Macroh2a1
Lef1
Glrx2
H2-M5
Zfp57
Epha1
Llgl2
Mllt6
Tigd4
Zfp410
Chka
Cldn34d
Rasgef1a
Fgd1
Gid4
Mcl1
Pabpc1
Slc35f2
Zfp72
Grhl3
Tnni3
Dnaaf3
Trim7
Trim41
Ano10
Galnt16
Chmp4c
Cst3
Slc12a2
Mtcl1
Dnajb6
Nedd4l
Slc13a2
Cep112
Jarid2
Olfr90
Mdm4
Stk38
H2bl1
Arfgef1
Dram1
Letmd1
Sp2
Slc16a9
Cuedc1
Dlc1
Kctd6
Fam53b
Wwc2
Ankle2
Smc6
Gen1
Rif1
Trim72
Itga9
Tead1
Clps
Lhfpl5
Smim8
Apc
Asxl1
Wrap53
Trp53
Frmd4a
Znrf1
Gja1
Adnp
Mif
Ucp2
Wsb2
Ntn1
Exoc6b
Snai1
Myc
Trmt61a
Ckb
Cdh5
Poli
C77080
Nampt
Zfp459
Akip1
Ndrg1
Prdm4
Rpl27
Mbp
Rhpn2
Zcrb1
Pphln1
Rnf125
Rabggtb
Car14
Gna13
Sumo3
Rheb
Cmip
Setx
Max
Slc7a7
Ifitm7
Epp13
Rrp36
Mea1
Klhdc3
Dhx32
Wdr59
Tfeb
Nutm2
Mdfic
Sfxn2
Arl3
Eno1
Setd1b
Rhof
Vmn1r214
Mrps23
Trim62
Fbxo5
Isg20
Gprc5a
Ebf4
Chd1
Plekhf1
Tmco4
Rnf186
Pou2f1
Ccdc30
Zmynd12
Ppcs
Mreg
Tor4a
Esrrg
Csn1s2a
Slc4a5
Nfkbiz
Zfp36l1
Olfr923
Vezt
Fgd6
Thpo
Polr2h
Clcn2
Chrd
Fgr
Rtcb
Mbtps2
Actn4
Slc5a1
Abl1
Dnajb8
Dynll2
Pik3r4
Syt3
1700008O03Rik
Lax1
Apobec3
Atrn
Tbc1d5
Upp1
Septin1
Zfp553
Slc17a9
Ooep
Dppa5a
Osbp2
Bloc1s2
Zmynd10
Tusc2
Rassf1
Faim
Adgra2
Ywhae
Ctbp2
Nt5e
Grb2
Maats1
Dnmt3a
Smtnl2
1700016H13Rik
Cdc42se1
Mllt11
Gabpb2
Cd244a
Tdgf1
Lrrc2
Lpar1
Cd37
Slc6a16
Adck5
Klhdc7a
Tpst2
Hebp1
Klrb1b
Clk1
Zfp964
Prdx6
Agtrap
Nkx2-2
Ptpra
Apbb2
Grk3
Colec12
Pou5f1
Rpl12
Lrsam1
Mpped2
Donson
Has3
Hoxa2
Vill
Get4
Ccn2
Med12l
Maml2
Nfyb
Bdh1
Fam169b
Mtss1
Spaca4
Fam83e
Defb11
LTO1
Smyd4
Rpa1
Tet1
Ryr2
Ddx58
Il17rd
Chd7
Wbp11
Smco3
BC049715
Nodal
Rmnd5b
Lhx1
Cdc42ep3
Kif17
Lbr
Smad7
Fgf5
Slc12a4
Kcnj6
Ccnd3
Taf8
Ubl3
Mgat4f
Jakmip1
Pacsin2
Pde3a
Timm9
2700049A03Rik
Uqcr11
Mbd3
Trh
Mturn
Camk2n1
Cox7a2
Zfand6
Mzt1
Mzf1
Plcxd1
Gtpbp6
Plekha8
Fkbp14
Ddit4
Tmcc2
Erfl
Sh2d5
Rassf8
Dennd2c
Id3
Pvr
Tdrd3
Unc5b
Stk3
Percc1
BC003965
Mt1
Mt2
Unkl
Ypel1
Acvr1b
Tcl1
Nwd1
Plekha7
Snx6
Rgs12
Ptms
Lag3
Uggt1
Bhlhe40
Slc37a3
Rab19
Prickle1
Oplah
Kcnj8
Actl6a
Zdhhc2
Zbtb45
Trim28
Eed
Cic
Ksr1
Nr2f6
Ushbp1
Tcte2
Ubr1
Tmem62
Mcf2l
Amotl2
Arap2
Cspp1
Cops5
Slc25a1
Psma6
Gm4861
Cort
Ap1g2
Agpat5
Map7d1
Zfp980
Zkscan17
Hook2
Brms1l
Olfr153
Cldn14
Gad2
Prss48
Mettl21a
Sclt1
D3Ertd751e
Zfp933
E030030I06Rik
Clec2h
Ms4a10
Spef1
Cenpb
Cdc25b
Zbtb7b
Tmc8
Tmc6
Tada1
Sdr9c7
Rdh7
Lama1
Faiml
Cep70
Sall4
B3gnt7
Lhpp
Tbx4
Slc9a1
Usp10
Nrf1
Tagln3
Trp53bp1
Rab37
Slc9a3r1
8030462N17Rik
Chid1
Kpnb1
Marchf1
Prrc1
Hif3a
Sv2c
Rragc
Leng9
Cdc42ep5
Castor1
Fan1
Glod5
Tvp23a
Zfp36l3
Irgm1
Mllt1
Aoc3
Aoc2
Rax
Oxr1
Hes7
Aloxe3
Snn
Cdhr1
Pdp2
Bag3
Hnrnpr
Capg
Arrb1
Gadd45g
Fam90a1a
Defb13
Adra2a
Slco5a1
Rps21
Hspb1
Fam161a
Chd8
Pccb
Zfp26
Zbtb34
Zfp64
Tmcc1
G2e3
Slco4a1
Cnot11
Ndrg4
P3h1
AU022252
Loxl3
Dok1
Rnf220
Evx1
Pou2f2
Jam3
Kat7
Psors1c2
Cdsn
Greb1
Mup6
Abcc4
Tha1
Tmem235
Slc38a7
Tbc1d9
Kazn
Lrrc31
Trabd
Ncor2
Dio3
Trim25
Ndufaf4
Dstn
Crocc
Tfg
Dmrta2
R3hdm2
Inhbc
Uhrf2
Zbtb8a
Slc25a22
Rplp2
Pidd1
Cend1
Gab1
Cds2
Phf12
Glis2
Phactr2
Usp5
Cdca3
Klhl21
Phf13
Tfap2c
Csrp1
Shoc2
Bbip1
Phf11d
Dppa3
Mamstr
Phc1
Mios
Zfp706
Ppp2r5b
Gpha2
Atg2a
Nkiras2
Dnajc7
Gpr83
Psmd3
Notch2
Prrc2b
Asap2
Tes
Naprt
Mroh6
Med26
Pdcd7
Hcfc2
Glt8d2
Cd55
Fahd2a
Nectin2
AB010352
Pcsk1n
Eras
Rnf114
Plch1
Vmn2r85
Rtl8c
Ralgps2
Tmem151b
Ppp2r3a
Nphp3
Gzme
Tmem104
Nat9
Yes1
Csrnp3
Loxhd1
Stmn1
Ankdd1b
Epb41l1
Gpr68
Tfe3
Mrc2
Nfix
Tmem117
Zscan10
Zfp13
Lin28a
Stoml2
Pigo
Fam214b
Ror1
Zfp981
Kcnj4
Bod1l
Rnf182
Adnp2
Pdpk1
Adprh
Sulf1
Plekhf2
Agfg1
Cuedc2
Flywch1
Mab21l1
Chrac1
Tcf7l1
Ell2
Prnp
Prn
Olfr539
Hes3
Ttyh2
Rpp14
Htd2
Hoxb13
Rab4a
Cltb
F2rl1
Tmem131l
Hspa8
Enpp4
Srsf9
Etnk1
Abcg2
Zfp810
Sec62
Tmem19
Agk
Gpa33
Trappc5
Mcemp1
Fcor
Sigmar1
Dctn3
Arid3c
Fbrsl1
Cadps2
Tbx20
Nfkb1
Zscan5b
Zbtb25
Zbtb1
Zmynd8
App
Jade2
Nin
Cenpa
Spint1
Ppp1r14d
Rock2
Tcirg1
Ndufs8
Nr6a1
Olfml2a
Fam181a
Man2a2
Notum
Cped1
Aspscr1
Chmp1b
Sptb
Twf2
Pdcd2
Msl1
Garre1
Hdac1
Nkx2-6
Nadsyn1
Dhcr7
Ppp1r1b
Neurod2
Pcdhgb8
Pcdhga12
Ncdn
AU040320
Ifitm1
Lifr
Deptor
Pfkfb2
AA986860
Pik3r3
Acvrl1
Ptch2
Zhx1
Lgals3
Plin3
Polg2
Ddx5
Cep95
Tmem108
Coq2
Junb
Lsm14b
Dlg3
Mtmr12
Dnajc21
Arhgef10l
Tulp4
Lrrc8b
Slc30a2
Pigh
Osgin1
Megf11
Gm7932
Map4k4
Ssr2
Bcl10
Fnta
Mars2
Rftn2
Mfsd10
Pecam1
Rtl8b
Bcap31
Abcd1
Dpys
Bcor
Zfc3h1
Thap2
Cdkn2aip
Ints13
Fgfr1op2
Tmem231
Gabarapl2
Cracd
Prex1
Clec11a
Itm2b
Uroc1
Chst13
1700122O11Rik
Ptprg
Cdk5rap3
Umad1
Rpa3
Zbtb24
Stk35
Sepsecs
Tprn
Tmem203
Ssna1
Ndor1
Anapc2
4930474N05Rik
Rrbp1
Casq2
Shc1
Flad1
Cks1b
Zfp532
Pptc7
Fbp1
Tm9sf4
Wipi2
Sox1
Gab2
Zdhhc6
Vti1a
Cdc42bpg
Sirpa
Tecpr2
Cinp
Cdc45
Klhl34
Ccdc3
Cyp51
Rnf216
Trip10
Gpr108
Wdr1
Tbc1d10b
Mylpf
Myo18a
Samd9l
Shf
Prkag1
Hipk2
Bbs1
Robo4
Slc12a7
Bahd1
Hmgb3
Lrrc25
Apcdd1
Hsd17b2
Qtrt1
Cbr3
Dmrtc2
Rps19
Lypd4
Il13
Lama5
Syngr2
Snx10
Rarres1
Mllt10
Sfn
Sh3bp1
Marco
Pnp
Pip4p1
Kank2
Igfbpl1
Piezo1
Inafm2
Sox2
Hpgd
Tor3a
Pdrg1
Slc6a1
Ahdc1
C4bp
Slc17a5
Smdt1
Ndufa6
Dscam
Rwdd2b
Ltn1
Ift140
Cramp1l
Fndc3b
Pax5
Hnrnpa2b1
Cbx3
Acpp
Mindy2
Foxi3
Slc26a8
Mapk14
Phlda1
Nid2
Steap3
Lhfpl2
Lingo1
D5Ertd579e
Casc3
Ninj1
Rev3l
Parp12
Mapkapk5
Src
Tubb5
Mdc1
Msh2
Oas1g
Cds1
Sh3tc1
Cep55
Cmtr2
Apold1
Fubp3
Sat1
Ccnc
Mpc1
Trmt9b
Gm10778
Recql4
Mfsd3
Lrrc14
Etv6
Abl2
Ppp1r36
Sirt4
Slc30a10
Ubc
Ppp2ca
Zyg11a
4930402H24Rik
Slc30a9
Tmprss12
Rhbdl3
Ubtf
Midn
Atp5d
Sms
Ccdc8
Slc44a4
Lamp1
Tgm1
Rabggta
Syne1
Magi1
Pdpn
Reep5
B4galt2
Atp6v0b
Dph2
Ackr3
Rps10
Marchf7
Tmed7
Eif1a
Atf3
Rac2
Ss18
Olfr725
Hic1
Ovca2
Lrrc38
Gnal
Rfx5
Sgms2
Zmym1
Olfr1034
H3c3
H2bc3
H1f2
Mnt
Dnttip2
Mmp15
Ksr2
Set
Ddx6
Nav2
Ap1s2
Pum3
Pdha1
4930519G04Rik
Aqp3
Kifc1
Dcaf11
Macroh2a2
Spty2d1
BC034090
Lrrc8d
Ndufa4l2
Stac3
Akr1b8
Zfp868
Slc14a1
Cmas
Prom1
Zbtb10
Grin2d
Nkx3-2
Irf7
Stx11
Grap2
Rai14
Kifc3
Apobec2
Atoh1
Mdga1
Lrmp
Spata21
Wnt3a
Sh3rf1
Smim40
Anxa11
Sgms1
2510009E07Rik
Irf1
Jade3
Arhgef3
Gbx2
Rnf122
Tcta
Rhoa
Zfp513
Snx17
Eif2b4
Smarcd1
C1ql1
Apol10a
Teddm1a
Glul
H2az2
Zfp976
Terf2
Olfr823
Tbl1xr1
Picalm
Afap1l2
Cldn23
Sgce
Peg10
Fxyd6
Tmem165
Zfp990
Znfx1
Atp2c2
Usp13
Cyth2
Plekhg3
Osm
Fam118a
Foxa2
Pes1
Sox13
Senp7
Klc1
Cyp7a1
Flrt2
Syne2
Mkrn2os
Mkrn2
Acp6
Elovl5
Gmnc
Psme3
Becn1